RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	SYH1	Q02875	849 aa	Known RBP	4.26	□□□□□ -1.73
NCR1	YPL006W	EEB1	Q02891	456 aa		4.26	□□□□□ -1.73
NCR1	YPL006W	YDR278C	Q05612	105 aa		4.26	□□□□□ -1.73
NCR1	YPL006W	PCL8	Q08966	492 aa		4.26	□□□□□ -1.73
NCR1	YPL006W	MED1	Q12321	566 aa		4.26	□□□□□ -1.73
NCR1	YPL006W	SPO21	Q12411	609 aa		4.26	□□□□□ -1.73
NCR1	YPL006W	PFK1	P16861	987 aa	Known RBP	4.25	□□□□□ -1.73
NCR1	YPL006W	RPL8A	P17076	256 aa	Known RBP	4.25	□□□□□ -1.73
NCR1	YPL006W	SAM2	P19358	384 aa	Known RBP	4.25	□□□□□ -1.73
NCR1	YPL006W	UBC6	P33296	250 aa	Predicted RBP	4.25	□□□□□ -1.73
NCR1	YPL006W	NIP100	P33420	868 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	LCP5	P40079	357 aa	Predicted RBP	4.25	□□□□□ -1.73
NCR1	YPL006W	HXT8	P40886	569 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	ADA2	Q02336	434 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	MFM1	Q02783	413 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	YMR187C	Q03236	431 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	TDA9	Q04545	1251 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	YMR074C	Q04773	145 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	YEL1	P34225	687 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	PGM2	P37012	569 aa	Known RBP	4.25	□□□□□ -1.73
NCR1	YPL006W	MMS21	P38632	267 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	YJL171C	P46992	396 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	SEC5	P89102	971 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	YLR297W	Q05899	129 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	YLR177W	Q06251	628 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	FKS1	P38631	1876 aa	Known RBP	4.25	□□□□□ -1.73
NCR1	YPL006W	LOS1	P33418	1100 aa	Predicted RBP	4.25	□□□□□ -1.73
NCR1	YPL006W	SWH1	P35845	1188 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	HEL1	P36113	551 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	NDT80	P38830	627 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	UBP9	P39967	754 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	PGA2	P53903	129 aa		4.25	□□□□□ -1.73
NCR1	YPL006W	CSR1	Q06705	408 aa	Known RBP	4.25	□□□□□ -1.73
NCR1	YPL006W	TSR1	Q07381	788 aa	Known RBP	4.25	□□□□□ -1.73
NCR1	YPL006W	RNA1	P11745	407 aa	Known RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	GAL11	P19659	1081 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	ILV6	P25605	309 aa	Known RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	YKL023W	P36103	277 aa	Known RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	SUL1	P38359	859 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	VPS45	P38932	577 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	SAP185	P40856	1058 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	URB2	P47108	1174 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	ESBP6	P53918	673 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	YLH47	Q06493	454 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	ACK1	Q07622	623 aa	Predicted RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	OXR1	Q08952	273 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	AIM41	Q12032	185 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	RIB2	Q12362	591 aa	Known RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	ILV1	P00927	576 aa	Known RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	ARD1	P07347	238 aa	Predicted RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	PEP5	P12868	1029 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	KIN1	P13185	1064 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	NIP1	P32497	812 aa	Known RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	YKU70	P32807	602 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	LCB2	P40970	561 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	SGM1	P47166	707 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	VID30	P53076	958 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	ORC4	P54791	529 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	HOT1	Q03213	719 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	YMR018W	Q04364	514 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	PNP1	Q05788	311 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	MAG2	Q06436	670 aa	Known RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	YPL277C	Q08989	487 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	TAF10	Q12030	206 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	NCA2	Q12374	616 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	YLR462W	O13556	202 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	CAP1	P28495	268 aa	Known RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	GCD6	P32501	712 aa	Known RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	BLI1	P35727	113 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	AVT3	P36062	692 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	YKR018C	P36114	725 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	YBR062C	P38239	180 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	YHL049C	P38722	271 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	YEL075C	P39972	122 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	YER189W	P40104	122 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	ULP2	P40537	1034 aa	Predicted RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	YFL064C	P43540	174 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	BRO1	P48582	844 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	YML119W	Q03208	357 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	UTP4	Q06679	776 aa	Known RBP	4.24	□□□□□ -1.73
NCR1	YPL006W	FRA1	Q07825	749 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	YBL111C	Q3E7Y5	667 aa		4.24	□□□□□ -1.73
NCR1	YPL006W	ADH4	P10127	382 aa		4.23	□□□□□ -1.73
NCR1	YPL006W	YKL050C	P35736	922 aa		4.23	□□□□□ -1.73
NCR1	YPL006W	TRZ1	P36159	838 aa	Predicted RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	SUB1	P54000	292 aa	Known RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
NCR1	YPL006W	WHI4	Q07655	649 aa	Known RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	NOB1	Q08444	459 aa	Known RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	MPC54	Q08550	464 aa		4.23	□□□□□ -1.73
NCR1	YPL006W	RPB2	P08518	1224 aa	Known RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	KRS1	P15180	591 aa	Known RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	PRP22	P24384	1145 aa	Known RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	UBP1	P25037	809 aa		4.23	□□□□□ -1.73
NCR1	YPL006W	BUD31	P25337	157 aa	Predicted RBP	4.23	□□□□□ -1.73
NCR1	YPL006W	YME1	P32795	747 aa		4.23	□□□□□ -1.73
NCR1	YPL006W	VPS35	P34110	944 aa		4.23	□□□□□ -1.73
NCR1	YPL006W	TDA10	P42938	290 aa		4.23	□□□□□ -1.73
NCR1	YPL006W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
NCR1	YPL006W	VPS70	P47161	811 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 87.4 ms