RNA–Protein interactions for RNA: YOR076C

SKI7, Transcript of Coupling protein for the Ski complex and cytoplasmic exosome, yeast

Gene SKI7, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI7	YOR076C	EAF1	Q06337	982 aa		0.49	□□□□□ -2.33
SKI7	YOR076C	MBR1	P23493	339 aa		0.49	□□□□□ -2.33
SKI7	YOR076C	SRP101	P32916	621 aa		0.49	□□□□□ -2.33
SKI7	YOR076C	YJL206C	P39529	758 aa		0.49	□□□□□ -2.33
SKI7	YOR076C	RIA1	P53893	1110 aa		0.49	□□□□□ -2.33
SKI7	YOR076C	FUR4	P05316	633 aa	Known RBP	0.48	□□□□□ -2.33
SKI7	YOR076C	SEC23	P15303	768 aa	Known RBP	0.48	□□□□□ -2.33
SKI7	YOR076C	PEX6	P33760	1030 aa		0.48	□□□□□ -2.33
SKI7	YOR076C	CCC2	P38995	1004 aa		0.48	□□□□□ -2.33
SKI7	YOR076C	YJL163C	P46996	555 aa		0.48	□□□□□ -2.33
SKI7	YOR076C	DAM1	P53267	343 aa		0.48	□□□□□ -2.33
SKI7	YOR076C	DLT1	Q04216	342 aa		0.48	□□□□□ -2.33
SKI7	YOR076C	MET3	P08536	511 aa		0.48	□□□□□ -2.33
SKI7	YOR076C	APN1	P22936	367 aa		0.48	□□□□□ -2.33
SKI7	YOR076C	ATG19	P35193	415 aa		0.48	□□□□□ -2.33
SKI7	YOR076C	YBR053C	P38235	358 aa		0.48	□□□□□ -2.33
SKI7	YOR076C	DUN1	P39009	513 aa		0.48	□□□□□ -2.33
SKI7	YOR076C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	0.47	□□□□□ -2.33	not detected
SKI7	YOR076C	TUB3	P09734	445 aa	Known RBP	0.47	□□□□□ -2.33
SKI7	YOR076C	CTF13	P35203	478 aa		0.47	□□□□□ -2.33
SKI7	YOR076C	DMA1	P38823	416 aa		0.47	□□□□□ -2.33
SKI7	YOR076C	NMA2	P53204	395 aa		0.47	□□□□□ -2.33
SKI7	YOR076C	YCS4	Q06156	1176 aa		0.47	□□□□□ -2.33
SKI7	YOR076C	SLA2	P33338	968 aa		0.46	□□□□□ -2.34
SKI7	YOR076C	FAA2	P39518	744 aa		0.46	□□□□□ -2.34
SKI7	YOR076C	MXR1	P40029	184 aa		0.46	□□□□□ -2.34
SKI7	YOR076C	ULP2	P40537	1034 aa	Predicted RBP	0.46	□□□□□ -2.34
SKI7	YOR076C	RSM26	P47141	266 aa		0.46	□□□□□ -2.34
SKI7	YOR076C	MRK1	P50873	501 aa		0.46	□□□□□ -2.34
SKI7	YOR076C	SMX3	P54999	86 aa	Predicted RBP	0.46	□□□□□ -2.34
SKI7	YOR076C	HSF1	P10961	833 aa		0.46	□□□□□ -2.34
SKI7	YOR076C	CAF20	P12962	161 aa	Known RBP	0.46	□□□□□ -2.34
SKI7	YOR076C	UBS1	P38290	277 aa		0.46	□□□□□ -2.34
SKI7	YOR076C	PSP2	P50109	593 aa	Known RBP	0.46	□□□□□ -2.34
SKI7	YOR076C	MUP1	P50276	574 aa		0.46	□□□□□ -2.34
SKI7	YOR076C	DED1	P06634	604 aa	Known RBP	0.45	□□□□□ -2.34
SKI7	YOR076C	SEC21	P32074	935 aa	Known RBP	0.45	□□□□□ -2.34
SKI7	YOR076C	YAT2	P40017	923 aa		0.45	□□□□□ -2.34
SKI7	YOR076C	LSC1	P53598	329 aa	Known RBP	0.45	□□□□□ -2.34
SKI7	YOR076C	PHO2	P07269	559 aa		0.45	□□□□□ -2.34
SKI7	YOR076C	DBP2	P24783	546 aa	Known RBP	0.45	□□□□□ -2.34
SKI7	YOR076C	RGD1	P38339	666 aa		0.45	□□□□□ -2.34
SKI7	YOR076C	HGH1	P48362	394 aa	Known RBP	0.45	□□□□□ -2.34
SKI7	YOR076C	ULP1	Q02724	621 aa		0.45	□□□□□ -2.34
SKI7	YOR076C	YML083C	Q04526	418 aa		0.45	□□□□□ -2.34
SKI7	YOR076C	ECM21	P38167	1117 aa	Known RBP	0.44	□□□□□ -2.34
SKI7	YOR076C	CBR1	P38626	284 aa	Known RBP	0.44	□□□□□ -2.34
SKI7	YOR076C	PSA1	P41940	361 aa	Known RBP	0.44	□□□□□ -2.34
SKI7	YOR076C	YGR053C	P53234	283 aa		0.44	□□□□□ -2.34
SKI7	YOR076C	APJ1	P53940	528 aa		0.44	□□□□□ -2.34
SKI7	YOR076C	TRS120	Q04183	1289 aa		0.44	□□□□□ -2.34
SKI7	YOR076C	PEX19	Q07418	342 aa		0.44	□□□□□ -2.34
SKI7	YOR076C	SGO1	Q08490	590 aa		0.44	□□□□□ -2.34
SKI7	YOR076C	ACM1	Q08981	209 aa		0.44	□□□□□ -2.34
SKI7	YOR076C	MLH3	Q12083	715 aa		0.44	□□□□□ -2.34
SKI7	YOR076C	SQT1	P35184	431 aa		0.44	□□□□□ -2.34
SKI7	YOR076C	YIL169C	P40442	995 aa		0.44	□□□□□ -2.34
SKI7	YOR076C	SLK19	Q08581	821 aa	Known RBP	0.44	□□□□□ -2.34
SKI7	YOR076C	OSW2	Q12202	724 aa		0.44	□□□□□ -2.34
SKI7	YOR076C	SED4	P25365	1065 aa		0.43	□□□□□ -2.34
SKI7	YOR076C	MLS1	P30952	554 aa		0.43	□□□□□ -2.34
SKI7	YOR076C	YBR139W	P38109	508 aa		0.43	□□□□□ -2.34
SKI7	YOR076C	SSL2	Q00578	843 aa		0.43	□□□□□ -2.34
SKI7	YOR076C	NUP53	Q03790	475 aa		0.43	□□□□□ -2.34
SKI7	YOR076C	HFD1	Q04458	532 aa		0.43	□□□□□ -2.34
SKI7	YOR076C	SMA2	Q04658	369 aa		0.43	□□□□□ -2.34
SKI7	YOR076C	CRR1	Q05790	422 aa		0.43	□□□□□ -2.34
SKI7	YOR076C	NOC3	Q07896	663 aa	Predicted RBP	0.43	□□□□□ -2.34
SKI7	YOR076C	IRC13	Q08630	104 aa		0.43	□□□□□ -2.34
SKI7	YOR076C	THS1	P04801	734 aa	Known RBP	0.42	□□□□□ -2.34
SKI7	YOR076C	PRP40	P33203	583 aa	Known RBP	0.42	□□□□□ -2.34
SKI7	YOR076C	QDR1	P40475	563 aa		0.42	□□□□□ -2.34
SKI7	YOR076C	RPL11A	P0C0W9	174 aa	Known RBP	0.42	□□□□□ -2.34
SKI7	YOR076C	CPS1	P27614	576 aa		0.42	□□□□□ -2.34
SKI7	YOR076C	MKK2	P32491	506 aa		0.42	□□□□□ -2.34
SKI7	YOR076C	GLO3	P38682	493 aa	Known RBP	0.42	□□□□□ -2.34
SKI7	YOR076C	FKH2	P41813	862 aa		0.42	□□□□□ -2.34
SKI7	YOR076C	TRM11	Q12463	433 aa		0.42	□□□□□ -2.34
SKI7	YOR076C	RPL11B	Q3E757	174 aa	Predicted RBP	0.42	□□□□□ -2.34
SKI7	YOR076C	GGA2	P38817	585 aa	Known RBP	0.41	□□□□□ -2.34
SKI7	YOR076C	SCW4	P53334	386 aa	Known RBP	0.41	□□□□□ -2.34
SKI7	YOR076C	ROD1	Q02805	837 aa		0.41	□□□□□ -2.34
SKI7	YOR076C	GPI13	Q07830	1017 aa		0.41	□□□□□ -2.34
SKI7	YOR076C	EXO84	P38261	753 aa		0.41	□□□□□ -2.34
SKI7	YOR076C	GEM1	P39722	662 aa		0.41	□□□□□ -2.34
SKI7	YOR076C	MPH1	P40562	993 aa		0.41	□□□□□ -2.34
SKI7	YOR076C	TEL2	P53038	688 aa		0.41	□□□□□ -2.34
SKI7	YOR076C	CCT5	P40413	562 aa	Known RBP	0.4	□□□□□ -2.35
SKI7	YOR076C	UBP7	P40453	1071 aa		0.4	□□□□□ -2.35
SKI7	YOR076C	NDC80	P40460	691 aa		0.4	□□□□□ -2.35
SKI7	YOR076C	BSC6	Q08280	497 aa		0.4	□□□□□ -2.35
SKI7	YOR076C	EUG1	P32474	517 aa		0.4	□□□□□ -2.35
SKI7	YOR076C	RPN1	P38764	993 aa	Known RBP	0.4	□□□□□ -2.35
SKI7	YOR076C	BDH2	P39713	417 aa		0.4	□□□□□ -2.35
SKI7	YOR076C	KAR2	P16474	682 aa	Known RBP	0.39	□□□□□ -2.35
SKI7	YOR076C	ASK1	P35734	292 aa		0.39	□□□□□ -2.35
SKI7	YOR076C	YKL151C	P36059	337 aa		0.39	□□□□□ -2.35
SKI7	YOR076C	ARC40	P38328	384 aa	Known RBP	0.39	□□□□□ -2.35
SKI7	YOR076C	GIC1	P38785	314 aa		0.39	□□□□□ -2.35
SKI7	YOR076C	NPP2	P39997	493 aa		0.39	□□□□□ -2.35

Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms