RNA–Protein interactions for RNA: YMR185W

RTP1, Transcript of Protein required for the nuclear import and biogenesis of RNA pol II, yeastyeast

Gene RTP1, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTP1YMR185W PSY2P40164 858 aa2.03□□□□□ -2.08
RTP1YMR185W CUE3P53137 624 aaKnown RBP2.03□□□□□ -2.08
RTP1YMR185W NCE103P53615 221 aa2.03□□□□□ -2.08
RTP1YMR185W VPS75P53853 264 aa2.03□□□□□ -2.08
RTP1YMR185W DOT1Q04089 582 aaKnown RBP2.03□□□□□ -2.08
RTP1YMR185W GIN4Q12263 1142 aa2.03□□□□□ -2.08
RTP1YMR185W SEC23P15303 768 aaKnown RBP2.02□□□□□ -2.09
RTP1YMR185W CLB1P24868 471 aa2.02□□□□□ -2.09
RTP1YMR185W SRP40P32583 406 aaPredicted RBP2.02□□□□□ -2.09
RTP1YMR185W SKI2P35207 1287 aaKnown RBP RIP-Chip data2.02□□□□□ -2.09not detected
RTP1YMR185W MNR2P35724 969 aa2.02□□□□□ -2.09
RTP1YMR185W ECM1P39715 212 aa2.02□□□□□ -2.09
RTP1YMR185W UBP5P39944 805 aa2.02□□□□□ -2.09
RTP1YMR185W NTA1P40354 457 aa2.02□□□□□ -2.09
RTP1YMR185W PXA1P41909 870 aa2.02□□□□□ -2.09
RTP1YMR185W CIT3P43635 486 aa2.02□□□□□ -2.09
RTP1YMR185W YGL082WP53155 381 aa2.02□□□□□ -2.09
RTP1YMR185W MEC3Q02574 474 aa2.02□□□□□ -2.09
RTP1YMR185W VPS72Q03388 795 aa2.02□□□□□ -2.09
RTP1YMR185W WAR1Q03631 944 aa2.02□□□□□ -2.09
RTP1YMR185W ATG9Q12142 997 aa2.02□□□□□ -2.09
RTP1YMR185W PET123P17558 318 aa2.02□□□□□ -2.09
RTP1YMR185W RPO26P20435 155 aa2.02□□□□□ -2.09
RTP1YMR185W PRP5P21372 849 aaPredicted RBP2.02□□□□□ -2.09
RTP1YMR185W PEP3P27801 918 aa2.02□□□□□ -2.09
RTP1YMR185W BMH1P29311 267 aaKnown RBP2.02□□□□□ -2.09
RTP1YMR185W SWC3P31376 625 aa2.02□□□□□ -2.09
RTP1YMR185W NFU1P32860 256 aa2.02□□□□□ -2.09
RTP1YMR185W BYE1P36106 594 aa2.02□□□□□ -2.09
RTP1YMR185W PSY4P38193 441 aa2.02□□□□□ -2.09
RTP1YMR185W STM1P39015 273 aaKnown RBP2.02□□□□□ -2.09
RTP1YMR185W CCT4P39078 528 aaKnown RBP2.02□□□□□ -2.09
RTP1YMR185W RGD2P43556 714 aa2.02□□□□□ -2.09
RTP1YMR185W YGL081WP53156 320 aa2.02□□□□□ -2.09
RTP1YMR185W SSP2Q08646 371 aa2.02□□□□□ -2.09
RTP1YMR185W YKL068W-AQ3E826 78 aa2.02□□□□□ -2.09
RTP1YMR185W DFG16Q99234 619 aa2.02□□□□□ -2.09
RTP1YMR185W SUP35P05453 685 aaKnown RBP2.01□□□□□ -2.09
RTP1YMR185W UBC1P21734 215 aaKnown RBP2.01□□□□□ -2.09
RTP1YMR185W PYC2P32327 1180 aaKnown RBP2.01□□□□□ -2.09
RTP1YMR185W SWI3P32591 825 aa2.01□□□□□ -2.09
RTP1YMR185W NUP133P36161 1157 aa2.01□□□□□ -2.09
RTP1YMR185W GEF1P37020 779 aa2.01□□□□□ -2.09
RTP1YMR185W BOI1P38041 980 aaKnown RBP2.01□□□□□ -2.09
RTP1YMR185W EFM2P38347 419 aa2.01□□□□□ -2.09
RTP1YMR185W CTK3P46963 296 aaPredicted RBP2.01□□□□□ -2.09
RTP1YMR185W YNR065CP53751 1116 aa2.01□□□□□ -2.09
RTP1YMR185W NOP6Q07623 225 aaKnown RBP2.01□□□□□ -2.09
RTP1YMR185W SSF2Q12153 453 aaPredicted RBP2.01□□□□□ -2.09
RTP1YMR185W GLO4Q12320 285 aa2.01□□□□□ -2.09
RTP1YMR185W ADR1P07248 1323 aa2.01□□□□□ -2.09
RTP1YMR185W ARD1P07347 238 aaPredicted RBP2.01□□□□□ -2.09
RTP1YMR185W LRG1P35688 1017 aa2.01□□□□□ -2.09
RTP1YMR185W RFC5P38251 354 aa2.01□□□□□ -2.09
RTP1YMR185W GLO3P38682 493 aaKnown RBP2.01□□□□□ -2.09
RTP1YMR185W TDA3P38758 523 aa2.01□□□□□ -2.09
RTP1YMR185W BCD1P38772 366 aa2.01□□□□□ -2.09
RTP1YMR185W CRG1P38892 291 aaRIP-Chip data2.01□□□□□ -2.09not detected
RTP1YMR185W FYV10P40492 516 aa2.01□□□□□ -2.09
RTP1YMR185W BUD6P41697 788 aa2.01□□□□□ -2.09
RTP1YMR185W ECL1P48235 211 aa2.01□□□□□ -2.09
RTP1YMR185W YGL140CP53120 1219 aa2.01□□□□□ -2.09
RTP1YMR185W ARP5P53946 755 aa2.01□□□□□ -2.09
RTP1YMR185W RPL34AP87262 121 aaPredicted RBP2.01□□□□□ -2.09
RTP1YMR185W MSH6Q03834 1242 aa2.01□□□□□ -2.09
RTP1YMR185W VPS38Q05919 439 aa2.01□□□□□ -2.09
RTP1YMR185W TLG2Q08144 397 aa2.01□□□□□ -2.09
RTP1YMR185W NEW1Q08972 1196 aaKnown RBP2.01□□□□□ -2.09
RTP1YMR185W TAH18Q12181 623 aa2.01□□□□□ -2.09
RTP1YMR185W SSK22P25390 1331 aaPredicted RBP2.01□□□□□ -2.09
RTP1YMR185W LAM4P38800 1345 aa2.01□□□□□ -2.09
RTP1YMR185W OSM1P21375 501 aaKnown RBP2.01□□□□□ -2.09
RTP1YMR185W SPO11P23179 398 aa2.01□□□□□ -2.09
RTP1YMR185W CNS1P33313 385 aa2.01□□□□□ -2.09
RTP1YMR185W RIO2P40160 425 aaKnown RBP2.01□□□□□ -2.09
RTP1YMR185W XKS1P42826 600 aa2.01□□□□□ -2.09
RTP1YMR185W APT1P49435 187 aaKnown RBP2.01□□□□□ -2.09
RTP1YMR185W PRP31P49704 494 aaPredicted RBP2.01□□□□□ -2.09
RTP1YMR185W CAF130P53280 1122 aaPredicted RBP2.01□□□□□ -2.09
RTP1YMR185W BOP3P53958 396 aa2.01□□□□□ -2.09
RTP1YMR185W ZDS2P54786 942 aa2.01□□□□□ -2.09
RTP1YMR185W YMR102CQ03177 834 aa2.01□□□□□ -2.09
RTP1YMR185W RMT2Q03305 412 aa2.01□□□□□ -2.09
RTP1YMR185W KAR5Q04746 504 aa2.01□□□□□ -2.09
RTP1YMR185W ALE1Q08548 619 aa2.01□□□□□ -2.09
RTP1YMR185W CTI6Q08923 506 aa2.01□□□□□ -2.09
RTP1YMR185W HMI1Q12039 706 aa2.01□□□□□ -2.09
RTP1YMR185W NUR1Q12066 484 aa2.01□□□□□ -2.09
RTP1YMR185W PIF1P07271 859 aa2□□□□□ -2.09
RTP1YMR185W HXT1P32465 570 aa2□□□□□ -2.09
RTP1YMR185W HSP78P33416 811 aa2□□□□□ -2.09
RTP1YMR185W MFT1P33441 392 aaKnown RBP2□□□□□ -2.09
RTP1YMR185W BMH2P34730 273 aaKnown RBP2□□□□□ -2.09
RTP1YMR185W ADE17P38009 592 aaKnown RBP2□□□□□ -2.09
RTP1YMR185W CIC1P38779 376 aaKnown RBP2□□□□□ -2.09
RTP1YMR185W NDC80P40460 691 aa2□□□□□ -2.09
RTP1YMR185W DSN1P40568 576 aa2□□□□□ -2.09
RTP1YMR185W PIB2P53191 635 aa2□□□□□ -2.09
RTP1YMR185W YML119WQ03208 357 aa2□□□□□ -2.09
RTP1YMR185W STE23Q06010 1027 aa2□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 30.4 ms