RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C URB2P47108 1174 aa5.91□□□□□ -1.46
VBA1YMR088C ORM1P53224 222 aa5.91□□□□□ -1.46
VBA1YMR088C SNZ2P53824 298 aa5.91□□□□□ -1.46
VBA1YMR088C IPI3P53877 555 aa5.91□□□□□ -1.46
VBA1YMR088C FDC1Q03034 503 aa5.91□□□□□ -1.46
VBA1YMR088C ADE8P04161 214 aa5.9□□□□□ -1.47
VBA1YMR088C VAN1P23642 535 aa5.9□□□□□ -1.47
VBA1YMR088C SPT8P38915 602 aa5.9□□□□□ -1.47
VBA1YMR088C SAK1P38990 1142 aa5.9□□□□□ -1.47
VBA1YMR088C POP2P39008 433 aa5.9□□□□□ -1.47
VBA1YMR088C APS3P47064 194 aa5.9□□□□□ -1.47
VBA1YMR088C MPS2P53159 387 aa5.9□□□□□ -1.47
VBA1YMR088C CAF130P53280 1122 aaPredicted RBP5.9□□□□□ -1.47
VBA1YMR088C TAF11Q04226 346 aa5.9□□□□□ -1.47
VBA1YMR088C YDR286CQ05530 114 aa5.9□□□□□ -1.47
VBA1YMR088C DON1Q05610 365 aa5.9□□□□□ -1.47
VBA1YMR088C SUI3P09064 285 aaKnown RBP5.89□□□□□ -1.47
VBA1YMR088C PCT1P13259 424 aa5.89□□□□□ -1.47
VBA1YMR088C PWP1P21304 576 aaKnown RBP5.89□□□□□ -1.47
VBA1YMR088C RAD27P26793 382 aa5.89□□□□□ -1.47
VBA1YMR088C VPH2P32341 215 aa5.89□□□□□ -1.47
VBA1YMR088C AFR1P33304 620 aa5.89□□□□□ -1.47
VBA1YMR088C HSP78P33416 811 aa5.89□□□□□ -1.47
VBA1YMR088C PEX6P33760 1030 aa5.89□□□□□ -1.47
VBA1YMR088C HCS1P34243 683 aa5.89□□□□□ -1.47
VBA1YMR088C YKL050CP35736 922 aa5.89□□□□□ -1.47
VBA1YMR088C TEF4P36008 412 aaKnown RBP5.89□□□□□ -1.47
VBA1YMR088C UBX7P38349 436 aa5.89□□□□□ -1.47
VBA1YMR088C KAP123P40069 1113 aaKnown RBP5.89□□□□□ -1.47
VBA1YMR088C BUD6P41697 788 aa5.89□□□□□ -1.47
VBA1YMR088C NUP85P46673 744 aa5.89□□□□□ -1.47
VBA1YMR088C SGM1P47166 707 aa5.89□□□□□ -1.47
VBA1YMR088C SSN8P47821 323 aa5.89□□□□□ -1.47
VBA1YMR088C ECL1P48235 211 aa5.89□□□□□ -1.47
VBA1YMR088C GIM3P53900 129 aa5.89□□□□□ -1.47
VBA1YMR088C SPC19Q03954 165 aa5.89□□□□□ -1.47
VBA1YMR088C PLP1Q04004 230 aa5.89□□□□□ -1.47
VBA1YMR088C ISR1Q06098 443 aaKnown RBP5.89□□□□□ -1.47
VBA1YMR088C SPN1Q06505 410 aaPredicted RBP5.89□□□□□ -1.47
VBA1YMR088C YDL144CQ07589 356 aa5.89□□□□□ -1.47
VBA1YMR088C LOT6Q07923 191 aa5.89□□□□□ -1.47
VBA1YMR088C PGC1Q08959 321 aa5.89□□□□□ -1.47
VBA1YMR088C YEL077CQ3E7X8 1277 aa5.89□□□□□ -1.47
VBA1YMR088C SPP41P38904 1435 aa5.89□□□□□ -1.47
VBA1YMR088C PDR18P53756 1333 aa5.89□□□□□ -1.47
VBA1YMR088C TSC11P40061 1430 aa5.88□□□□□ -1.47
VBA1YMR088C RGP1P16664 663 aa5.88□□□□□ -1.47
VBA1YMR088C YAP1P19880 650 aaKnown RBP5.88□□□□□ -1.47
VBA1YMR088C RPN2P32565 945 aaKnown RBP5.88□□□□□ -1.47
VBA1YMR088C RPC34P32910 317 aa5.88□□□□□ -1.47
VBA1YMR088C XRS2P33301 854 aa5.88□□□□□ -1.47
VBA1YMR088C DUR3P33413 735 aa5.88□□□□□ -1.47
VBA1YMR088C SEC66P33754 206 aa5.88□□□□□ -1.47
VBA1YMR088C MTC2P34246 357 aa5.88□□□□□ -1.47
VBA1YMR088C VPS51P36116 164 aa5.88□□□□□ -1.47
VBA1YMR088C TRZ1P36159 838 aaPredicted RBP5.88□□□□□ -1.47
VBA1YMR088C UGA2P38067 497 aa5.88□□□□□ -1.47
VBA1YMR088C GDT1P38301 280 aaPredicted RBP5.88□□□□□ -1.47
VBA1YMR088C YHB1P39676 399 aaKnown RBP5.88□□□□□ -1.47
VBA1YMR088C AGX1P43567 385 aa5.88□□□□□ -1.47
VBA1YMR088C ATG1P53104 897 aa5.88□□□□□ -1.47
VBA1YMR088C YGR067CP53243 804 aa5.88□□□□□ -1.47
VBA1YMR088C MDR1P53258 950 aa5.88□□□□□ -1.47
VBA1YMR088C RAT1Q02792 1006 aaKnown RBP5.88□□□□□ -1.47
VBA1YMR088C ESF1Q06344 628 aaKnown RBP5.88□□□□□ -1.47
VBA1YMR088C ATG20Q07528 640 aa5.88□□□□□ -1.47
VBA1YMR088C TRM8Q12009 286 aa5.88□□□□□ -1.47
VBA1YMR088C MED4Q12343 284 aa5.88□□□□□ -1.47
VBA1YMR088C SFI1Q12369 946 aa5.88□□□□□ -1.47
VBA1YMR088C SRB8P25648 1427 aa5.88□□□□□ -1.47
VBA1YMR088C YMR084WA2P2R3 262 aa5.88□□□□□ -1.47
VBA1YMR088C HIS3P06633 220 aa5.88□□□□□ -1.47
VBA1YMR088C GLK1P17709 500 aaKnown RBP5.88□□□□□ -1.47
VBA1YMR088C PRP22P24384 1145 aaKnown RBP5.88□□□□□ -1.47
VBA1YMR088C MGM1P32266 881 aa5.88□□□□□ -1.47
VBA1YMR088C ASF2P32448 525 aaPredicted RBP5.88□□□□□ -1.47
VBA1YMR088C YKL063CP35725 167 aa5.88□□□□□ -1.47
VBA1YMR088C BAP2P38084 609 aa5.88□□□□□ -1.47
VBA1YMR088C ALD5P40047 520 aaKnown RBP5.88□□□□□ -1.47
VBA1YMR088C EMW1P42842 904 aaKnown RBP5.88□□□□□ -1.47
VBA1YMR088C YFL066CP43538 392 aa5.88□□□□□ -1.47
VBA1YMR088C MDV1P47025 714 aa5.88□□□□□ -1.47
VBA1YMR088C UBA2P52488 636 aa5.88□□□□□ -1.47
VBA1YMR088C ACS2P52910 683 aaKnown RBP5.88□□□□□ -1.47
VBA1YMR088C MIG2P53035 382 aa5.88□□□□□ -1.47
VBA1YMR088C SEC5P89102 971 aa5.88□□□□□ -1.47
VBA1YMR088C TAF8Q03750 510 aa5.88□□□□□ -1.47
VBA1YMR088C ACF2Q12168 779 aa5.88□□□□□ -1.47
VBA1YMR088C OSH2Q12451 1283 aa5.88□□□□□ -1.47
VBA1YMR088C YGR161W-CQ3E744 92 aa5.88□□□□□ -1.47
VBA1YMR088C RPO31P04051 1460 aa5.87□□□□□ -1.47
VBA1YMR088C YPK9Q12697 1472 aa5.87□□□□□ -1.47
VBA1YMR088C JIP3O13555 125 aa5.87□□□□□ -1.47
VBA1YMR088C SCP160P06105 1222 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
VBA1YMR088C HAP4P14064 554 aa5.87□□□□□ -1.47
VBA1YMR088C ATE1P16639 503 aa5.87□□□□□ -1.47
VBA1YMR088C VPS3P23643 1011 aa5.87□□□□□ -1.47
VBA1YMR088C YHR131CP38835 850 aa5.87□□□□□ -1.47
VBA1YMR088C MBP1P39678 833 aa5.87□□□□□ -1.47
VBA1YMR088C STU2P46675 888 aa5.87□□□□□ -1.47
Retrieved 100 of 5,963 RNA–protein pairs in 104.5 ms