RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C SUE1Q06524 206 aa5.37□□□□□ -1.55
NUP116YMR047C IRE1P32361 1115 aa5.36□□□□□ -1.55
NUP116YMR047C AKR1P39010 764 aa5.36□□□□□ -1.55
NUP116YMR047C REX2P54964 269 aaKnown RBP5.36□□□□□ -1.55
NUP116YMR047C SEC5P89102 971 aa5.36□□□□□ -1.55
NUP116YMR047C CSM3Q04659 317 aa5.36□□□□□ -1.55
NUP116YMR047C UTP13Q05946 817 aaKnown RBP5.36□□□□□ -1.55
NUP116YMR047C ORM2Q06144 216 aa5.36□□□□□ -1.55
NUP116YMR047C NDL1Q06568 189 aa5.36□□□□□ -1.55
NUP116YMR047C ATG11Q12527 1178 aa5.36□□□□□ -1.55
NUP116YMR047C PGI1P12709 554 aaKnown RBP5.36□□□□□ -1.55
NUP116YMR047C FAF1P40546 346 aaPredicted RBP5.36□□□□□ -1.55
NUP116YMR047C RTC4P53850 401 aa5.36□□□□□ -1.55
NUP116YMR047C HEL2Q05580 639 aaKnown RBP5.36□□□□□ -1.55
NUP116YMR047C FOB1O13329 566 aa5.36□□□□□ -1.55
NUP116YMR047C MIP1P15801 1254 aa5.36□□□□□ -1.55
NUP116YMR047C THR4P16120 514 aaKnown RBP5.36□□□□□ -1.55
NUP116YMR047C SEC6P32844 805 aa5.36□□□□□ -1.55
NUP116YMR047C TTI1P36097 1038 aa5.36□□□□□ -1.55
NUP116YMR047C RFT1P38206 574 aaPredicted RBP5.36□□□□□ -1.55
NUP116YMR047C UBP15P50101 1230 aa5.36□□□□□ -1.55
NUP116YMR047C BNI5P53890 448 aaKnown RBP5.36□□□□□ -1.55
NUP116YMR047C YOR389WQ08912 624 aa5.36□□□□□ -1.55
NUP116YMR047C DAP1Q12091 152 aa5.36□□□□□ -1.55
NUP116YMR047C ACE2P21192 770 aa5.35□□□□□ -1.55
NUP116YMR047C KNS1P32350 737 aaPredicted RBP5.35□□□□□ -1.55
NUP116YMR047C SEC27P41811 889 aaKnown RBP5.35□□□□□ -1.55
NUP116YMR047C DAK2P43550 591 aa5.35□□□□□ -1.55
NUP116YMR047C OCA1P50946 238 aaPredicted RBP5.35□□□□□ -1.55
NUP116YMR047C YVC1Q12324 675 aa5.35□□□□□ -1.55
NUP116YMR047C KEX2P13134 814 aa5.35□□□□□ -1.55
NUP116YMR047C MET13P53128 600 aa5.35□□□□□ -1.55
NUP116YMR047C YNL034WP53963 612 aa5.35□□□□□ -1.55
NUP116YMR047C YNL018CP53976 612 aa5.35□□□□□ -1.55
NUP116YMR047C MEH1Q02205 184 aa5.35□□□□□ -1.55
NUP116YMR047C COQ9Q05779 260 aa5.35□□□□□ -1.55
NUP116YMR047C AVO1Q08236 1176 aa5.35□□□□□ -1.55
NUP116YMR047C SPE3Q12074 293 aaKnown RBP5.35□□□□□ -1.55
NUP116YMR047C IMP2'P32351 346 aa5.35□□□□□ -1.55
NUP116YMR047C NDT80P38830 627 aa5.35□□□□□ -1.55
NUP116YMR047C TVP23P38962 199 aa5.35□□□□□ -1.55
NUP116YMR047C SHE10P53075 577 aa5.35□□□□□ -1.55
NUP116YMR047C RTS3P53289 263 aa5.35□□□□□ -1.55
NUP116YMR047C MDM38Q08179 573 aa5.35□□□□□ -1.55
NUP116YMR047C GLE1Q12315 538 aa5.35□□□□□ -1.55
NUP116YMR047C SWH1P35845 1188 aa5.34□□□□□ -1.55
NUP116YMR047C HXT13P39924 564 aa5.34□□□□□ -1.55
NUP116YMR047C FYV10P40492 516 aa5.34□□□□□ -1.55
NUP116YMR047C OPT1P40897 799 aa5.34□□□□□ -1.55
NUP116YMR047C OYE3P41816 400 aaPredicted RBP5.34□□□□□ -1.55
NUP116YMR047C YGR153WP48238 217 aa5.34□□□□□ -1.55
NUP116YMR047C CAF130P53280 1122 aaPredicted RBP5.34□□□□□ -1.55
NUP116YMR047C HXT17P53631 564 aa5.34□□□□□ -1.55
NUP116YMR047C SMC5Q08204 1093 aa5.34□□□□□ -1.55
NUP116YMR047C YDR034W-BQ6Q5X2 51 aa5.34□□□□□ -1.55
NUP116YMR047C ZUO1P32527 433 aaKnown RBP5.34□□□□□ -1.55
NUP116YMR047C ELM1P32801 640 aa5.34□□□□□ -1.55
NUP116YMR047C RPT1P33299 467 aaKnown RBP5.34□□□□□ -1.55
NUP116YMR047C RAD17P48581 401 aa5.34□□□□□ -1.55
NUP116YMR047C SMD2Q06217 110 aaKnown RBP5.34□□□□□ -1.55
NUP116YMR047C PEX19Q07418 342 aa5.34□□□□□ -1.55
NUP116YMR047C PSO2P30620 661 aa5.33□□□□□ -1.56
NUP116YMR047C STT3P39007 718 aaKnown RBP5.33□□□□□ -1.56
NUP116YMR047C YMR124WP39523 943 aaKnown RBP5.33□□□□□ -1.56
NUP116YMR047C SEC26P41810 973 aaKnown RBP5.33□□□□□ -1.56
NUP116YMR047C YNL058CP53947 316 aa5.33□□□□□ -1.56
NUP116YMR047C ARR1Q06596 294 aa5.33□□□□□ -1.56
NUP116YMR047C SRD1P09007 221 aa5.33□□□□□ -1.56
NUP116YMR047C GAL11P19659 1081 aa5.33□□□□□ -1.56
NUP116YMR047C ESS1P22696 170 aa5.33□□□□□ -1.56
NUP116YMR047C ACP1P32463 125 aa5.33□□□□□ -1.56
NUP116YMR047C UBP13P38187 747 aa5.33□□□□□ -1.56
NUP116YMR047C RPN10P38886 268 aaKnown RBP5.33□□□□□ -1.56
NUP116YMR047C RPT2P40327 437 aaKnown RBP5.33□□□□□ -1.56
NUP116YMR047C LSB6P42951 607 aa5.33□□□□□ -1.56
NUP116YMR047C TY4A-JP47023 414 aa5.33□□□□□ -1.56
NUP116YMR047C PSP2P50109 593 aaKnown RBP5.33□□□□□ -1.56
NUP116YMR047C YLR455WQ06188 304 aa5.33□□□□□ -1.56
NUP116YMR047C JIP5Q06214 492 aaPredicted RBP5.33□□□□□ -1.56
NUP116YMR047C RAD59Q12223 238 aa5.33□□□□□ -1.56
NUP116YMR047C PCD1Q12524 340 aa5.33□□□□□ -1.56
NUP116YMR047C CLN3P13365 580 aa5.33□□□□□ -1.56
NUP116YMR047C BRF1P29056 596 aa5.33□□□□□ -1.56
NUP116YMR047C VPS35P34110 944 aa5.33□□□□□ -1.56
NUP116YMR047C RPS7BP48164 190 aaKnown RBP5.33□□□□□ -1.56
NUP116YMR047C DSE4P53753 1117 aa5.33□□□□□ -1.56
NUP116YMR047C GIR2Q03768 265 aaPredicted RBP5.33□□□□□ -1.56
NUP116YMR047C ELG1Q12050 791 aa5.33□□□□□ -1.56
NUP116YMR047C RPA135P22138 1203 aaKnown RBP5.32□□□□□ -1.56
NUP116YMR047C NFU1P32860 256 aa5.32□□□□□ -1.56
NUP116YMR047C SPC42P36094 363 aa5.32□□□□□ -1.56
NUP116YMR047C RIM4P38741 713 aa5.32□□□□□ -1.56
NUP116YMR047C YHR131CP38835 850 aa5.32□□□□□ -1.56
NUP116YMR047C RPL17BP46990 184 aaKnown RBP5.32□□□□□ -1.56
NUP116YMR047C YML119WQ03208 357 aa5.32□□□□□ -1.56
NUP116YMR047C HOT1Q03213 719 aa5.32□□□□□ -1.56
NUP116YMR047C HEH2Q03281 663 aa5.32□□□□□ -1.56
NUP116YMR047C YDR344CQ05510 147 aa5.32□□□□□ -1.56
NUP116YMR047C GET3Q12154 354 aaKnown RBP5.32□□□□□ -1.56
NUP116YMR047C TMT1P32643 299 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 182.3 ms