RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W ROG3P43602 733 aa4.97□□□□□ -1.61
SSH4YKL124W SPO74P45819 413 aa4.97□□□□□ -1.61
SSH4YKL124W MCM6P53091 1017 aaKnown RBP4.97□□□□□ -1.61
SSH4YKL124W MEH1Q02205 184 aa4.97□□□□□ -1.61
SSH4YKL124W SKY1Q03656 742 aa4.97□□□□□ -1.61
SSH4YKL124W GET3Q12154 354 aaKnown RBP4.97□□□□□ -1.61
SSH4YKL124W GSY1P23337 708 aa4.96□□□□□ -1.62
SSH4YKL124W EFT1P32324 842 aaKnown RBP4.96□□□□□ -1.62
SSH4YKL124W VRP1P37370 817 aa4.96□□□□□ -1.62
SSH4YKL124W STT3P39007 718 aaKnown RBP4.96□□□□□ -1.62
SSH4YKL124W FIS1P40515 155 aa4.96□□□□□ -1.62
SSH4YKL124W NNF1P47149 201 aa4.96□□□□□ -1.62
SSH4YKL124W TFB3Q03290 321 aa4.96□□□□□ -1.62
SSH4YKL124W FUS2Q05670 677 aa4.96□□□□□ -1.62
SSH4YKL124W SLK19Q08581 821 aaKnown RBP4.96□□□□□ -1.62
SSH4YKL124W ELG1Q12050 791 aa4.96□□□□□ -1.62
SSH4YKL124W ALG1P16661 449 aa4.95□□□□□ -1.62
SSH4YKL124W RPC31P17890 251 aa4.95□□□□□ -1.62
SSH4YKL124W VPS1P21576 704 aaKnown RBP4.95□□□□□ -1.62
SSH4YKL124W NFU1P32860 256 aa4.95□□□□□ -1.62
SSH4YKL124W BRE2P43132 505 aa4.95□□□□□ -1.62
SSH4YKL124W YGR153WP48238 217 aa4.95□□□□□ -1.62
SSH4YKL124W CTF18P49956 741 aa4.95□□□□□ -1.62
SSH4YKL124W ENV11P53246 860 aa4.95□□□□□ -1.62
SSH4YKL124W YNL115CP53925 644 aa4.95□□□□□ -1.62
SSH4YKL124W SVF1Q05515 481 aa4.95□□□□□ -1.62
SSH4YKL124W SMC5Q08204 1093 aa4.95□□□□□ -1.62
SSH4YKL124W MPC54Q08550 464 aa4.95□□□□□ -1.62
SSH4YKL124W HFI1Q12060 488 aa4.95□□□□□ -1.62
SSH4YKL124W YPL150WQ12152 901 aa4.95□□□□□ -1.62
SSH4YKL124W QCR6P00127 147 aa4.94□□□□□ -1.62
SSH4YKL124W SRD1P09007 221 aa4.94□□□□□ -1.62
SSH4YKL124W RPL19AP0CX82 189 aaKnown RBP4.94□□□□□ -1.62
SSH4YKL124W RPL19BP0CX83 189 aaPredicted RBP4.94□□□□□ -1.62
SSH4YKL124W TCP1P12612 559 aaKnown RBP4.94□□□□□ -1.62
SSH4YKL124W CLN3P13365 580 aa4.94□□□□□ -1.62
SSH4YKL124W POL3P15436 1097 aa4.94□□□□□ -1.62
SSH4YKL124W JJJ3P47138 172 aa4.94□□□□□ -1.62
SSH4YKL124W HAP5Q02516 242 aa4.94□□□□□ -1.62
SSH4YKL124W ROD1Q02805 837 aa4.94□□□□□ -1.62
SSH4YKL124W GRX3Q03835 250 aa4.94□□□□□ -1.62
SSH4YKL124W TRS120Q04183 1289 aa4.94□□□□□ -1.62
SSH4YKL124W YOR296WQ08748 1289 aa4.94□□□□□ -1.62
SSH4YKL124W DCS2Q12123 353 aa4.94□□□□□ -1.62
SSH4YKL124W TIF1P10081 395 aaKnown RBP4.94□□□□□ -1.62
SSH4YKL124W PGI1P12709 554 aaKnown RBP4.94□□□□□ -1.62
SSH4YKL124W CKA2P19454 339 aa4.94□□□□□ -1.62
SSH4YKL124W ORC6P38826 435 aa4.94□□□□□ -1.62
SSH4YKL124W YAP1801P38856 637 aa4.94□□□□□ -1.62
SSH4YKL124W FYV10P40492 516 aa4.94□□□□□ -1.62
SSH4YKL124W RTC4P53850 401 aa4.94□□□□□ -1.62
SSH4YKL124W COQ9Q05779 260 aa4.94□□□□□ -1.62
SSH4YKL124W SMC6Q12749 1114 aa4.94□□□□□ -1.62
SSH4YKL124W NBL1Q3E7Y6 73 aa4.94□□□□□ -1.62
SSH4YKL124W HSP82P02829 709 aaKnown RBP4.93□□□□□ -1.62
SSH4YKL124W DED1P06634 604 aaKnown RBP4.93□□□□□ -1.62
SSH4YKL124W SSB1P11484 613 aaKnown RBP4.93□□□□□ -1.62
SSH4YKL124W SUP45P12385 437 aaKnown RBP4.93□□□□□ -1.62
SSH4YKL124W MSD1P15179 658 aaKnown RBP4.93□□□□□ -1.62
SSH4YKL124W MCM3P24279 971 aaKnown RBP4.93□□□□□ -1.62
SSH4YKL124W CDC3P32457 520 aaKnown RBP4.93□□□□□ -1.62
SSH4YKL124W SPT23P35210 1082 aa4.93□□□□□ -1.62
SSH4YKL124W SSB2P40150 613 aaKnown RBP4.93□□□□□ -1.62
SSH4YKL124W INP51P40559 946 aaKnown RBP4.93□□□□□ -1.62
SSH4YKL124W MET13P53128 600 aa4.93□□□□□ -1.62
SSH4YKL124W DIP5P53388 608 aa4.93□□□□□ -1.62
SSH4YKL124W YDR034W-BQ6Q5X2 51 aa4.93□□□□□ -1.62
SSH4YKL124W YMR084WA2P2R3 262 aa4.92□□□□□ -1.62
SSH4YKL124W CPA2P03965 1118 aaKnown RBP4.92□□□□□ -1.62
SSH4YKL124W PBS2P08018 668 aa4.92□□□□□ -1.62
SSH4YKL124W IDI1P15496 288 aa4.92□□□□□ -1.62
SSH4YKL124W CAD1P24813 409 aaKnown RBP4.92□□□□□ -1.62
SSH4YKL124W CDC48P25694 835 aaKnown RBP4.92□□□□□ -1.62
SSH4YKL124W DPH2P32461 534 aa4.92□□□□□ -1.62
SSH4YKL124W DID4P36108 232 aa4.92□□□□□ -1.62
SSH4YKL124W RFC5P38251 354 aa4.92□□□□□ -1.62
SSH4YKL124W NMD3P38861 518 aaKnown RBP4.92□□□□□ -1.62
SSH4YKL124W EAF5P39995 279 aa4.92□□□□□ -1.62
SSH4YKL124W NUP82P40368 713 aa4.92□□□□□ -1.62
SSH4YKL124W YIR014WP40570 242 aa4.92□□□□□ -1.62
SSH4YKL124W SDA1P53313 767 aaKnown RBP4.92□□□□□ -1.62
SSH4YKL124W NMA111P53920 997 aa4.92□□□□□ -1.62
SSH4YKL124W SVL3Q03088 825 aaKnown RBP4.92□□□□□ -1.62
SSH4YKL124W MMR1Q06324 491 aa4.92□□□□□ -1.62
SSH4YKL124W YLH47Q06493 454 aa4.92□□□□□ -1.62
SSH4YKL124W SPT2P06843 333 aaPredicted RBP4.92□□□□□ -1.62
SSH4YKL124W ADE2P21264 571 aaKnown RBP4.92□□□□□ -1.62
SSH4YKL124W DRE2P36152 348 aa4.92□□□□□ -1.62
SSH4YKL124W SLX1P38324 304 aa4.92□□□□□ -1.62
SSH4YKL124W BUD16P39988 312 aa4.92□□□□□ -1.62
SSH4YKL124W THI6P41835 540 aa4.92□□□□□ -1.62
SSH4YKL124W DAK2P43550 591 aa4.92□□□□□ -1.62
SSH4YKL124W GCV2P49095 1034 aa4.92□□□□□ -1.62
SSH4YKL124W CBK1P53894 756 aa4.92□□□□□ -1.62
SSH4YKL124W PGA2P53903 129 aa4.92□□□□□ -1.62
SSH4YKL124W MUK1Q02866 612 aa4.92□□□□□ -1.62
SSH4YKL124W COG4Q06096 861 aa4.92□□□□□ -1.62
SSH4YKL124W MAG2Q06436 670 aaKnown RBP4.92□□□□□ -1.62
SSH4YKL124W FOB1O13329 566 aa4.91□□□□□ -1.62
SSH4YKL124W WHI2P12611 486 aa4.91□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 10.9 ms