RNA–Protein interactions for RNA: YGR119C

NUP57, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP57, Length 1,626 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP57YGR119C BUD6P41697 788 aa8.12□□□□□ -1.11
NUP57YGR119C YLR407WQ06070 228 aa8.12□□□□□ -1.11
NUP57YGR119C SOG2Q08817 791 aa8.12□□□□□ -1.11
NUP57YGR119C RRM3P38766 723 aa8.11□□□□□ -1.11
NUP57YGR119C YNL193WP53870 558 aa8.11□□□□□ -1.11
NUP57YGR119C PEX13P80667 386 aa8.11□□□□□ -1.11
NUP57YGR119C SNU66Q12420 587 aaPredicted RBP8.11□□□□□ -1.11
NUP57YGR119C LAM4P38800 1345 aa8.11□□□□□ -1.11
NUP57YGR119C RFT1P38206 574 aaPredicted RBP8.11□□□□□ -1.11
NUP57YGR119C FET4P40988 552 aa8.11□□□□□ -1.11
NUP57YGR119C PDC5P16467 563 aaKnown RBP8.1□□□□□ -1.11
NUP57YGR119C IMP2'P32351 346 aa8.1□□□□□ -1.11
NUP57YGR119C PEX28P38848 579 aa8.1□□□□□ -1.11
NUP57YGR119C CEP3P40969 608 aa8.1□□□□□ -1.11
NUP57YGR119C CWC24P53769 259 aa8.1□□□□□ -1.11
NUP57YGR119C GSY2P27472 705 aa8.09□□□□□ -1.11
NUP57YGR119C YMR147WP40218 223 aaKnown RBP8.09□□□□□ -1.11
NUP57YGR119C NOG1Q02892 647 aaKnown RBP8.09□□□□□ -1.11
NUP57YGR119C VMS1Q04311 632 aaKnown RBP8.09□□□□□ -1.11
NUP57YGR119C SFI1Q12369 946 aa8.09□□□□□ -1.11
NUP57YGR119C GPM1P00950 247 aaKnown RBP8.08□□□□□ -1.12
NUP57YGR119C GCR1P07261 785 aa8.08□□□□□ -1.12
NUP57YGR119C PGI1P12709 554 aaKnown RBP8.08□□□□□ -1.12
NUP57YGR119C CDC34P14682 295 aa8.08□□□□□ -1.12
NUP57YGR119C MSH3P25336 1018 aa8.08□□□□□ -1.12
NUP57YGR119C GRX1P25373 110 aaKnown RBP8.08□□□□□ -1.12
NUP57YGR119C SRP40P32583 406 aaPredicted RBP8.08□□□□□ -1.12
NUP57YGR119C LTV1P34078 463 aa8.08□□□□□ -1.12
NUP57YGR119C SKI2P35207 1287 aaKnown RBP RIP-Chip data8.08□□□□□ -1.12not detected
NUP57YGR119C OCA5P38738 679 aa8.08□□□□□ -1.12
NUP57YGR119C NEO1P40527 1151 aa8.08□□□□□ -1.12
NUP57YGR119C MRL1Q06815 381 aa8.08□□□□□ -1.12
NUP57YGR119C ADR1P07248 1323 aa8.08□□□□□ -1.12
NUP57YGR119C YKT6P36015 200 aaKnown RBP8.07□□□□□ -1.12
NUP57YGR119C NNF1P47149 201 aa8.07□□□□□ -1.12
NUP57YGR119C YGL082WP53155 381 aa8.07□□□□□ -1.12
NUP57YGR119C SOK2P53438 785 aaPredicted RBP8.07□□□□□ -1.12
NUP57YGR119C WAR1Q03631 944 aa8.07□□□□□ -1.12
NUP57YGR119C DUT1P33317 147 aa8.07□□□□□ -1.12
NUP57YGR119C SHU2P38957 223 aa8.07□□□□□ -1.12
NUP57YGR119C FAA4P47912 694 aaKnown RBP8.07□□□□□ -1.12
NUP57YGR119C YGL140CP53120 1219 aa8.07□□□□□ -1.12
NUP57YGR119C GUP1P53154 560 aa8.07□□□□□ -1.12
NUP57YGR119C GDE1Q02979 1223 aa8.07□□□□□ -1.12
NUP57YGR119C HAS1Q03532 505 aaKnown RBP8.07□□□□□ -1.12
NUP57YGR119C SSF2Q12153 453 aaPredicted RBP8.07□□□□□ -1.12
NUP57YGR119C HTS1P07263 546 aaKnown RBP8.06□□□□□ -1.12
NUP57YGR119C SEC23P15303 768 aaKnown RBP8.06□□□□□ -1.12
NUP57YGR119C EXO5P38289 585 aa8.06□□□□□ -1.12
NUP57YGR119C TFG2P41896 400 aaPredicted RBP8.06□□□□□ -1.12
NUP57YGR119C EPL1P43572 832 aa8.06□□□□□ -1.12
NUP57YGR119C JJJ3P47138 172 aa8.06□□□□□ -1.12
NUP57YGR119C TAH18Q12181 623 aa8.06□□□□□ -1.12
NUP57YGR119C TY1A-LR4P0C2I8 440 aaKnown RBP8.05□□□□□ -1.12
NUP57YGR119C TY1A-DR6P0CX70 440 aa8.05□□□□□ -1.12
NUP57YGR119C TY1A-ER1P0CX71 440 aa8.05□□□□□ -1.12
NUP57YGR119C TY1A-LR2P0CX72 440 aa8.05□□□□□ -1.12
NUP57YGR119C TY1A-PLP0CX73 440 aa8.05□□□□□ -1.12
NUP57YGR119C TY1A-JR1P0CX74 440 aa8.05□□□□□ -1.12
NUP57YGR119C TY1A-LR3P0CX75 440 aa8.05□□□□□ -1.12
NUP57YGR119C TY1A-ML2P0CX76 440 aa8.05□□□□□ -1.12
NUP57YGR119C NAR1P23503 491 aaKnown RBP8.05□□□□□ -1.12
NUP57YGR119C NOC2P39744 710 aaKnown RBP8.05□□□□□ -1.12
NUP57YGR119C JSN1P47135 1091 aaKnown RBP RIP-Chip data8.05□□□□□ -1.12not detected
NUP57YGR119C RTT10Q08924 1013 aa8.05□□□□□ -1.12
NUP57YGR119C TY1A-GR1Q12085 440 aa8.05□□□□□ -1.12
NUP57YGR119C TY1A-PR3Q6Q5H1 440 aaKnown RBP8.05□□□□□ -1.12
NUP57YGR119C TY1A-OLQ92392 440 aaKnown RBP8.05□□□□□ -1.12
NUP57YGR119C POM152P39685 1337 aa8.05□□□□□ -1.12
NUP57YGR119C HEM13P11353 328 aaKnown RBP8.04□□□□□ -1.12
NUP57YGR119C GBP2P25555 427 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
NUP57YGR119C MCM4P30665 933 aaKnown RBP8.04□□□□□ -1.12
NUP57YGR119C CIN4P39110 191 aa8.04□□□□□ -1.12
NUP57YGR119C GIS4Q04233 774 aa8.04□□□□□ -1.12
NUP57YGR119C HPF1Q05164 967 aa8.04□□□□□ -1.12
NUP57YGR119C HDA2Q06629 674 aa8.04□□□□□ -1.12
NUP57YGR119C RRI2Q12348 645 aa8.04□□□□□ -1.12
NUP57YGR119C HSP82P02829 709 aaKnown RBP8.03□□□□□ -1.12
NUP57YGR119C PIF1P07271 859 aa8.03□□□□□ -1.12
NUP57YGR119C CBP3P21560 335 aa8.03□□□□□ -1.12
NUP57YGR119C SPC110P32380 944 aa8.03□□□□□ -1.12
NUP57YGR119C PSY4P38193 441 aa8.03□□□□□ -1.12
NUP57YGR119C CRG1P38892 291 aaRIP-Chip data8.03□□□□□ -1.12 RIP-Chip
NUP57YGR119C COG4Q06096 861 aa8.03□□□□□ -1.12
NUP57YGR119C CTI6Q08923 506 aa8.03□□□□□ -1.12
NUP57YGR119C PET111P08468 800 aa8.03□□□□□ -1.12
NUP57YGR119C PFK2P16862 959 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
NUP57YGR119C SER1P33330 395 aaKnown RBP8.03□□□□□ -1.12
NUP57YGR119C YKL077WP36081 392 aa8.03□□□□□ -1.12
NUP57YGR119C GIP2P40036 548 aa8.03□□□□□ -1.12
NUP57YGR119C ENP2P48234 707 aaKnown RBP8.03□□□□□ -1.12
NUP57YGR119C GNP1P48813 663 aa8.03□□□□□ -1.12
NUP57YGR119C VPS60Q03390 229 aa8.03□□□□□ -1.12
NUP57YGR119C SPN1Q06505 410 aaPredicted RBP8.03□□□□□ -1.12
NUP57YGR119C YIG1Q08956 461 aa8.03□□□□□ -1.12
NUP57YGR119C WRS1Q12109 432 aaKnown RBP8.03□□□□□ -1.12
NUP57YGR119C RPL22AP05749 121 aaKnown RBP8.02□□□□□ -1.13
NUP57YGR119C PGM2P37012 569 aaKnown RBP8.02□□□□□ -1.13
NUP57YGR119C ALG14P38242 237 aa8.02□□□□□ -1.13
NUP57YGR119C TED1P40533 473 aa8.02□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 14.3 ms