RNA–Protein interactions for RNA: YGL090W

LIF1, Transcript of Component of the DNA ligase IV complex, yeast

Gene LIF1, Length 1,266 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LIF1	YGL090W	ENA1	P13587	1091 aa		4.08	□□□□□ -1.76
LIF1	YGL090W	CHS7	P38843	316 aa		4.08	□□□□□ -1.76
LIF1	YGL090W	PNT1	P38969	423 aa		4.08	□□□□□ -1.76
LIF1	YGL090W	PLB1	P39105	664 aa		4.08	□□□□□ -1.76
LIF1	YGL090W	SIP5	P40210	489 aa	Known RBP	4.08	□□□□□ -1.76
LIF1	YGL090W	RPT2	P40327	437 aa	Known RBP	4.08	□□□□□ -1.76
LIF1	YGL090W	ALG12	P53730	551 aa		4.08	□□□□□ -1.76
LIF1	YGL090W	ENA2	Q01896	1091 aa		4.08	□□□□□ -1.76
LIF1	YGL090W	GIR2	Q03768	265 aa	Predicted RBP	4.08	□□□□□ -1.76
LIF1	YGL090W	RLP24	Q07915	199 aa	Known RBP	4.08	□□□□□ -1.76
LIF1	YGL090W	ENA5	Q12691	1091 aa		4.08	□□□□□ -1.76
LIF1	YGL090W	DNA2	P38859	1522 aa		4.07	□□□□□ -1.76
LIF1	YGL090W	GAL11	P19659	1081 aa		4.07	□□□□□ -1.76
LIF1	YGL090W	DPB3	P27344	201 aa		4.07	□□□□□ -1.76
LIF1	YGL090W	LYP1	P32487	611 aa		4.07	□□□□□ -1.76
LIF1	YGL090W	PMC1	P38929	1173 aa	Predicted RBP	4.07	□□□□□ -1.76
LIF1	YGL090W	ZRG8	P40021	1076 aa		4.07	□□□□□ -1.76
LIF1	YGL090W	MND2	P40577	368 aa		4.07	□□□□□ -1.76
LIF1	YGL090W	YGL176C	P46945	554 aa		4.07	□□□□□ -1.76
LIF1	YGL090W	YLR225C	Q05948	407 aa	Known RBP	4.07	□□□□□ -1.76
LIF1	YGL090W	ESC2	Q06340	456 aa		4.07	□□□□□ -1.76
LIF1	YGL090W	TPO1	Q07824	586 aa		4.07	□□□□□ -1.76
LIF1	YGL090W	PET112	P33893	541 aa		4.06	□□□□□ -1.76
LIF1	YGL090W	GEM1	P39722	662 aa		4.06	□□□□□ -1.76
LIF1	YGL090W	VPS27	P40343	622 aa	Known RBP	4.06	□□□□□ -1.76
LIF1	YGL090W	MTC3	P53077	123 aa		4.06	□□□□□ -1.76
LIF1	YGL090W	TYW3	P53177	273 aa		4.06	□□□□□ -1.76
LIF1	YGL090W	ESF2	P53743	316 aa	Known RBP	4.06	□□□□□ -1.76
LIF1	YGL090W	TMA46	Q12000	345 aa	Known RBP	4.06	□□□□□ -1.76
LIF1	YGL090W	NKP1	Q12493	238 aa		4.06	□□□□□ -1.76
LIF1	YGL090W	PMA1	P05030	918 aa	Known RBP	4.05	□□□□□ -1.76
LIF1	YGL090W	NOC2	P39744	710 aa	Known RBP	4.05	□□□□□ -1.76
LIF1	YGL090W	RRT14	P40470	206 aa		4.05	□□□□□ -1.76
LIF1	YGL090W	YOL057W	Q08225	711 aa		4.05	□□□□□ -1.76
LIF1	YGL090W	CDC34	P14682	295 aa		4.04	□□□□□ -1.76
LIF1	YGL090W	PWP2	P25635	923 aa	Known RBP	4.04	□□□□□ -1.76
LIF1	YGL090W	SRP40	P32583	406 aa	Predicted RBP	4.04	□□□□□ -1.76
LIF1	YGL090W	GRX4	P32642	244 aa		4.04	□□□□□ -1.76
LIF1	YGL090W	YKL151C	P36059	337 aa		4.04	□□□□□ -1.76
LIF1	YGL090W	POA1	P38218	177 aa		4.04	□□□□□ -1.76
LIF1	YGL090W	ERP2	P39704	215 aa		4.04	□□□□□ -1.76
LIF1	YGL090W	CWC22	P53333	577 aa	Known RBP	4.04	□□□□□ -1.76
LIF1	YGL090W	KIN4	Q01919	800 aa		4.04	□□□□□ -1.76
LIF1	YGL090W	RPN4	Q03465	531 aa		4.04	□□□□□ -1.76
LIF1	YGL090W	HRQ1	Q05549	1077 aa		4.04	□□□□□ -1.76
LIF1	YGL090W	NOP12	Q08208	459 aa	Known RBP	4.04	□□□□□ -1.76
LIF1	YGL090W	CIT2	P08679	460 aa		4.03	□□□□□ -1.76
LIF1	YGL090W	DCG1	P32460	244 aa		4.03	□□□□□ -1.76
LIF1	YGL090W	SRP101	P32916	621 aa		4.03	□□□□□ -1.76
LIF1	YGL090W	YKL091C	P33324	310 aa	Known RBP	4.03	□□□□□ -1.76
LIF1	YGL090W	YKL107W	P34251	309 aa		4.03	□□□□□ -1.76
LIF1	YGL090W	DEF1	P35732	738 aa	Known RBP	4.03	□□□□□ -1.76
LIF1	YGL090W	VPS24	P36095	224 aa	Known RBP	4.03	□□□□□ -1.76
LIF1	YGL090W	ENP1	P38333	483 aa	Known RBP	4.03	□□□□□ -1.76
LIF1	YGL090W	UTP14	Q04500	899 aa	Known RBP	4.03	□□□□□ -1.76
LIF1	YGL090W	ADY3	Q07732	790 aa		4.03	□□□□□ -1.76
LIF1	YGL090W	OSW2	Q12202	724 aa		4.03	□□□□□ -1.76
LIF1	YGL090W	KAR1	P11927	433 aa		4.02	□□□□□ -1.77
LIF1	YGL090W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
LIF1	YGL090W	YAP1801	P38856	637 aa		4.02	□□□□□ -1.77
LIF1	YGL090W	MSS4	P38994	779 aa		4.02	□□□□□ -1.77
LIF1	YGL090W	IOC3	P43596	787 aa		4.02	□□□□□ -1.77
LIF1	YGL090W	MET12	P46151	657 aa		4.02	□□□□□ -1.77
LIF1	YGL090W	VMS1	Q04311	632 aa	Known RBP	4.02	□□□□□ -1.77
LIF1	YGL090W	NSE3	Q05541	303 aa		4.02	□□□□□ -1.77
LIF1	YGL090W	JIP5	Q06214	492 aa	Predicted RBP	4.02	□□□□□ -1.77
LIF1	YGL090W	PPM2	Q08282	695 aa		4.02	□□□□□ -1.77
LIF1	YGL090W	YGR161W-C	Q3E744	92 aa		4.02	□□□□□ -1.77
LIF1	YGL090W	ABD1	P32783	436 aa	Predicted RBP	4.01	□□□□□ -1.77
LIF1	YGL090W	MPE1	P35728	441 aa	Known RBP	4.01	□□□□□ -1.77
LIF1	YGL090W	IES1	P43579	692 aa		4.01	□□□□□ -1.77
LIF1	YGL090W	RKM4	Q12504	494 aa		4.01	□□□□□ -1.77
LIF1	YGL090W	THS1	P04801	734 aa	Known RBP	4	□□□□□ -1.77
LIF1	YGL090W	HIS5	P07172	385 aa		4	□□□□□ -1.77
LIF1	YGL090W	MRC1	P25588	1096 aa		4	□□□□□ -1.77
LIF1	YGL090W	NPP2	P39997	493 aa		4	□□□□□ -1.77
LIF1	YGL090W	HOS4	P40480	1083 aa		4	□□□□□ -1.77
LIF1	YGL090W	FAA4	P47912	694 aa	Known RBP	4	□□□□□ -1.77
LIF1	YGL090W	YGR012W	P53206	393 aa		4	□□□□□ -1.77
LIF1	YGL090W	DNM1	P54861	757 aa		4	□□□□□ -1.77
LIF1	YGL090W	COG4	Q06096	861 aa		4	□□□□□ -1.77
LIF1	YGL090W	WHI4	Q07655	649 aa	Known RBP	4	□□□□□ -1.77
LIF1	YGL090W	MDM38	Q08179	573 aa		4	□□□□□ -1.77
LIF1	YGL090W	KCS1	Q12494	1050 aa		4	□□□□□ -1.77
LIF1	YGL090W	CLN2	P20438	545 aa		3.99	□□□□□ -1.77
LIF1	YGL090W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	3.99	□□□□□ -1.77	not detected
LIF1	YGL090W	BLI1	P35727	113 aa		3.99	□□□□□ -1.77
LIF1	YGL090W	EBP2	P36049	427 aa	Known RBP	3.99	□□□□□ -1.77
LIF1	YGL090W	GRX7	P38068	203 aa		3.99	□□□□□ -1.77
LIF1	YGL090W	GIC1	P38785	314 aa		3.99	□□□□□ -1.77
LIF1	YGL090W	UBP12	P39538	1254 aa		3.99	□□□□□ -1.77
LIF1	YGL090W	MBP1	P39678	833 aa		3.99	□□□□□ -1.77
LIF1	YGL090W	SAH1	P39954	449 aa	Known RBP	3.99	□□□□□ -1.77
LIF1	YGL090W	MPP10	P47083	593 aa	Known RBP	3.99	□□□□□ -1.77
LIF1	YGL090W	SFB2	P53953	876 aa		3.99	□□□□□ -1.77
LIF1	YGL090W	RMD1	Q03441	430 aa		3.99	□□□□□ -1.77
LIF1	YGL090W	ECM16	Q04217	1267 aa	Known RBP	3.99	□□□□□ -1.77
LIF1	YGL090W	CDA1	Q06702	301 aa		3.99	□□□□□ -1.77
LIF1	YGL090W	RPA135	P22138	1203 aa	Known RBP	3.98	□□□□□ -1.77
LIF1	YGL090W	SEC6	P32844	805 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 7.9 ms