RNA–Protein interactions for RNA: YFR024C-A

LSB3, Transcript of Protein containing a C-terminal SH3 domain, yeast

Gene LSB3, Length 1,380 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB3	YFR024C-A	BUD2	P33314	1104 aa		10.22	□□□□□ -0.77
LSB3	YFR024C-A	KEX1	P09620	729 aa		10.21	□□□□□ -0.78
LSB3	YFR024C-A	WHI2	P12611	486 aa		10.21	□□□□□ -0.78
LSB3	YFR024C-A	COT1	P32798	439 aa		10.21	□□□□□ -0.78
LSB3	YFR024C-A	ELM1	P32801	640 aa		10.21	□□□□□ -0.78
LSB3	YFR024C-A	VPS35	P34110	944 aa		10.21	□□□□□ -0.78
LSB3	YFR024C-A	SAD1	P43589	448 aa		10.21	□□□□□ -0.78
LSB3	YFR024C-A	SPO74	P45819	413 aa		10.21	□□□□□ -0.78
LSB3	YFR024C-A	YGR035C	P53222	116 aa		10.21	□□□□□ -0.78
LSB3	YFR024C-A	CUR1	Q06469	252 aa		10.21	□□□□□ -0.78
LSB3	YFR024C-A	PSR2	Q07949	397 aa		10.21	□□□□□ -0.78
LSB3	YFR024C-A	AHC1	Q12433	566 aa		10.21	□□□□□ -0.78
LSB3	YFR024C-A	UBR2	Q07963	1872 aa		10.2	□□□□□ -0.78
LSB3	YFR024C-A	PGM2	P37012	569 aa	Known RBP	10.2	□□□□□ -0.78
LSB3	YFR024C-A	SSP1	P38871	571 aa		10.2	□□□□□ -0.78
LSB3	YFR024C-A	CCT5	P40413	562 aa	Known RBP	10.2	□□□□□ -0.78
LSB3	YFR024C-A	AVT1	P47082	602 aa		10.2	□□□□□ -0.78
LSB3	YFR024C-A	CAF130	P53280	1122 aa	Predicted RBP	10.2	□□□□□ -0.78
LSB3	YFR024C-A	RTT102	P53330	157 aa		10.2	□□□□□ -0.78
LSB3	YFR024C-A	HIP1	P06775	603 aa		10.19	□□□□□ -0.78
LSB3	YFR024C-A	PCK1	P10963	549 aa		10.19	□□□□□ -0.78
LSB3	YFR024C-A	DPH2	P32461	534 aa		10.19	□□□□□ -0.78
LSB3	YFR024C-A	YSC83	P32792	385 aa		10.19	□□□□□ -0.78
LSB3	YFR024C-A	YKT6	P36015	200 aa	Known RBP	10.19	□□□□□ -0.78
LSB3	YFR024C-A	DRE2	P36152	348 aa		10.19	□□□□□ -0.78
LSB3	YFR024C-A	PPS1	P38148	807 aa		10.19	□□□□□ -0.78
LSB3	YFR024C-A	SNF7	P39929	240 aa	Known RBP	10.19	□□□□□ -0.78
LSB3	YFR024C-A	JHD1	P40034	492 aa		10.19	□□□□□ -0.78
LSB3	YFR024C-A	ARK1	P53974	638 aa		10.19	□□□□□ -0.78
LSB3	YFR024C-A	IES4	Q08561	116 aa		10.19	□□□□□ -0.78
LSB3	YFR024C-A	OSW2	Q12202	724 aa		10.19	□□□□□ -0.78
LSB3	YFR024C-A	DDP1	Q99321	188 aa	Known RBP	10.19	□□□□□ -0.78
LSB3	YFR024C-A	CDC15	P27636	974 aa		10.18	□□□□□ -0.78
LSB3	YFR024C-A	TMT1	P32643	299 aa		10.18	□□□□□ -0.78
LSB3	YFR024C-A	SLX5	P32828	619 aa	Known RBP	10.18	□□□□□ -0.78
LSB3	YFR024C-A	RSC8	P43609	557 aa	Known RBP	10.18	□□□□□ -0.78
LSB3	YFR024C-A	MUK1	Q02866	612 aa		10.18	□□□□□ -0.78
LSB3	YFR024C-A	SKY1	Q03656	742 aa		10.18	□□□□□ -0.78
LSB3	YFR024C-A	ETT1	Q08421	412 aa	Known RBP	10.18	□□□□□ -0.78
LSB3	YFR024C-A	UBP13	P38187	747 aa		10.17	□□□□□ -0.78
LSB3	YFR024C-A	ERC1	P38767	581 aa		10.17	□□□□□ -0.78
LSB3	YFR024C-A	YPT11	P48559	417 aa		10.17	□□□□□ -0.78
LSB3	YFR024C-A	CUL3	P53202	744 aa		10.17	□□□□□ -0.78
LSB3	YFR024C-A	TPO2	P53283	614 aa		10.17	□□□□□ -0.78
LSB3	YFR024C-A	TOF1	P53840	1238 aa		10.17	□□□□□ -0.78
LSB3	YFR024C-A	YNL146W	P53906	100 aa		10.17	□□□□□ -0.78
LSB3	YFR024C-A	YDL057W	Q07379	328 aa		10.17	□□□□□ -0.78
LSB3	YFR024C-A	AIM44	Q99299	758 aa		10.17	□□□□□ -0.78
LSB3	YFR024C-A	ADE2	P21264	571 aa	Known RBP	10.16	□□□□□ -0.78
LSB3	YFR024C-A	CAD1	P24813	409 aa	Known RBP	10.16	□□□□□ -0.78
LSB3	YFR024C-A	YAP1801	P38856	637 aa		10.16	□□□□□ -0.78
LSB3	YFR024C-A	YFL034W	P43564	1073 aa		10.16	□□□□□ -0.78
LSB3	YFR024C-A	GCV2	P49095	1034 aa		10.16	□□□□□ -0.78
LSB3	YFR024C-A	MCM6	P53091	1017 aa	Known RBP	10.16	□□□□□ -0.78
LSB3	YFR024C-A	HAP5	Q02516	242 aa		10.16	□□□□□ -0.78
LSB3	YFR024C-A	YPL277C	Q08989	487 aa		10.16	□□□□□ -0.78
LSB3	YFR024C-A	TIF1	P10081	395 aa	Known RBP	10.15	□□□□□ -0.78
LSB3	YFR024C-A	CIR1	P42940	261 aa		10.15	□□□□□ -0.78
LSB3	YFR024C-A	YNL134C	P53912	376 aa	Known RBP	10.15	□□□□□ -0.78
LSB3	YFR024C-A	YVH1	Q02256	364 aa	Known RBP	10.15	□□□□□ -0.78
LSB3	YFR024C-A	PCD1	Q12524	340 aa		10.15	□□□□□ -0.78
LSB3	YFR024C-A	PHO8	P11491	566 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	10.14	□□□□□ -0.79	not detected
LSB3	YFR024C-A	NAM7	P30771	971 aa	Known RBP	10.14	□□□□□ -0.79
LSB3	YFR024C-A	SAC6	P32599	642 aa	Known RBP	10.14	□□□□□ -0.79
LSB3	YFR024C-A	SKG6	P32900	734 aa	Predicted RBP	10.14	□□□□□ -0.79
LSB3	YFR024C-A	YER130C	P39959	443 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	ALT2	P52892	507 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	SHE10	P53075	577 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	MNP1	P53163	194 aa	Predicted RBP	10.14	□□□□□ -0.79
LSB3	YFR024C-A	TAM41	P53230	385 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	ECM7	Q06200	448 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	MAG2	Q06436	670 aa	Known RBP	10.14	□□□□□ -0.79
LSB3	YFR024C-A	MNN4	P36044	1178 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	VID24	P38263	362 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	LAM5	P43560	674 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	VID30	P53076	958 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	VTC3	Q02725	835 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	DOT1	Q04089	582 aa	Known RBP	10.14	□□□□□ -0.79
LSB3	YFR024C-A	TLG2	Q08144	397 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	APC11	Q12157	165 aa		10.14	□□□□□ -0.79
LSB3	YFR024C-A	GPA1	P08539	472 aa		10.13	□□□□□ -0.79
LSB3	YFR024C-A	MSD1	P15179	658 aa	Known RBP	10.13	□□□□□ -0.79
LSB3	YFR024C-A	GLN3	P18494	730 aa		10.13	□□□□□ -0.79
LSB3	YFR024C-A	MRF1	P30775	413 aa	Predicted RBP	10.13	□□□□□ -0.79
LSB3	YFR024C-A	MRX3	P38172	270 aa		10.13	□□□□□ -0.79
LSB3	YFR024C-A	BIM1	P40013	344 aa		10.13	□□□□□ -0.79
LSB3	YFR024C-A	RSM25	P40496	264 aa		10.13	□□□□□ -0.79
LSB3	YFR024C-A	DJP1	P40564	432 aa		10.13	□□□□□ -0.79
LSB3	YFR024C-A	HUL4	P40985	892 aa		10.13	□□□□□ -0.79
LSB3	YFR024C-A	NBP1	P52919	319 aa	Predicted RBP	10.13	□□□□□ -0.79
LSB3	YFR024C-A	YDR090C	Q03193	310 aa		10.13	□□□□□ -0.79
LSB3	YFR024C-A	TCO89	Q08921	799 aa		10.13	□□□□□ -0.79
LSB3	YFR024C-A	SLX1	P38324	304 aa		10.12	□□□□□ -0.79
LSB3	YFR024C-A	UBX7	P38349	436 aa		10.12	□□□□□ -0.79
LSB3	YFR024C-A	YHL026C	P38740	315 aa		10.12	□□□□□ -0.79
LSB3	YFR024C-A	ESL1	P40456	1118 aa		10.12	□□□□□ -0.79
LSB3	YFR024C-A	CCM1	P48237	864 aa	Predicted RBP	10.12	□□□□□ -0.79
LSB3	YFR024C-A	ISM1	P48526	1002 aa		10.12	□□□□□ -0.79
LSB3	YFR024C-A	ENV11	P53246	860 aa		10.12	□□□□□ -0.79

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms