RNA–Protein interactions for RNA: YFL047W

RGD2, Transcript of GTPase-activating protein (RhoGAP) for Cdc42p and Rho5p, yeastyeast

Gene RGD2, Length 2,145 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RGD2YFL047W SEC20P28791 383 aa7.24□□□□□ -1.25
RGD2YFL047W YKL023WP36103 277 aaKnown RBP7.24□□□□□ -1.25
RGD2YFL047W SDS3P40505 327 aa7.24□□□□□ -1.25
RGD2YFL047W TRS85P46944 698 aa7.24□□□□□ -1.25
RGD2YFL047W FMS1P50264 508 aa7.24□□□□□ -1.25
RGD2YFL047W YGR021WP53212 290 aa7.24□□□□□ -1.25
RGD2YFL047W SEC5P89102 971 aa7.24□□□□□ -1.25
RGD2YFL047W KIN4Q01919 800 aa7.24□□□□□ -1.25
RGD2YFL047W APL5Q08951 932 aaKnown RBP7.24□□□□□ -1.25
RGD2YFL047W YPL277CQ08989 487 aa7.24□□□□□ -1.25
RGD2YFL047W PWP2P25635 923 aaKnown RBP7.23□□□□□ -1.25
RGD2YFL047W NAM7P30771 971 aaKnown RBP7.23□□□□□ -1.25
RGD2YFL047W SEC8P32855 1065 aa7.23□□□□□ -1.25
RGD2YFL047W YKL222CP35995 705 aa7.23□□□□□ -1.25
RGD2YFL047W PGM2P37012 569 aaKnown RBP7.23□□□□□ -1.25
RGD2YFL047W GTT3P39996 337 aa7.23□□□□□ -1.25
RGD2YFL047W DIP5P53388 608 aa7.23□□□□□ -1.25
RGD2YFL047W YLR297WQ05899 129 aa7.23□□□□□ -1.25
RGD2YFL047W LAP2Q10740 671 aa7.23□□□□□ -1.25
RGD2YFL047W ZRT2Q12436 422 aa7.23□□□□□ -1.25
RGD2YFL047W ARP6Q12509 438 aa7.23□□□□□ -1.25
RGD2YFL047W OLA1P38219 394 aaKnown RBP7.22□□□□□ -1.25
RGD2YFL047W SPP381P38282 291 aaPredicted RBP7.22□□□□□ -1.25
RGD2YFL047W DSN1P40568 576 aa7.22□□□□□ -1.25
RGD2YFL047W OYE2Q03558 400 aaKnown RBP7.22□□□□□ -1.25
RGD2YFL047W DIP2Q12220 943 aaPredicted RBP7.22□□□□□ -1.25
RGD2YFL047W SUP45P12385 437 aaKnown RBP7.22□□□□□ -1.25
RGD2YFL047W PRP9P19736 530 aaKnown RBP7.22□□□□□ -1.25
RGD2YFL047W MRF1P30775 413 aaPredicted RBP7.22□□□□□ -1.25
RGD2YFL047W BCH2P36122 765 aa7.22□□□□□ -1.25
RGD2YFL047W RCK2P38623 610 aa7.22□□□□□ -1.25
RGD2YFL047W HXT8P40886 569 aa7.22□□□□□ -1.25
RGD2YFL047W UBP3Q01477 912 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
RGD2YFL047W GIR2Q03768 265 aaPredicted RBP7.22□□□□□ -1.25
RGD2YFL047W TSR1Q07381 788 aaKnown RBP7.22□□□□□ -1.25
RGD2YFL047W WHI4Q07655 649 aaKnown RBP7.22□□□□□ -1.25
RGD2YFL047W TUB2P02557 457 aaKnown RBP7.21□□□□□ -1.25
RGD2YFL047W PRP16P15938 1071 aaPredicted RBP7.21□□□□□ -1.25
RGD2YFL047W PRE10P21242 288 aaKnown RBP RIP-Chip data7.21□□□□□ -1.25not detected
RGD2YFL047W UGA4P32837 571 aa7.21□□□□□ -1.25
RGD2YFL047W TPS3P38426 1054 aaKnown RBP7.21□□□□□ -1.25
RGD2YFL047W PXA1P41909 870 aa7.21□□□□□ -1.25
RGD2YFL047W RPC17P47076 161 aa7.21□□□□□ -1.25
RGD2YFL047W EAF6P47128 113 aa7.21□□□□□ -1.25
RGD2YFL047W VPS4P52917 437 aa7.21□□□□□ -1.25
RGD2YFL047W VID30P53076 958 aa7.21□□□□□ -1.25
RGD2YFL047W ARK1P53974 638 aa7.21□□□□□ -1.25
RGD2YFL047W YDR278CQ05612 105 aa7.21□□□□□ -1.25
RGD2YFL047W PMA1P05030 918 aaKnown RBP7.21□□□□□ -1.26
RGD2YFL047W PHR1P05066 565 aaKnown RBP RIP-Chip data7.21□□□□□ -1.26not detected
RGD2YFL047W YSW1P38280 609 aa7.21□□□□□ -1.26
RGD2YFL047W CCT2P39076 527 aaKnown RBP7.21□□□□□ -1.26
RGD2YFL047W LCB2P40970 561 aa7.21□□□□□ -1.26
RGD2YFL047W FIG4P42837 879 aa7.21□□□□□ -1.26
RGD2YFL047W YJR039WP47107 1121 aa7.21□□□□□ -1.26
RGD2YFL047W SGM1P47166 707 aa7.21□□□□□ -1.26
RGD2YFL047W SYH1Q02875 849 aaKnown RBP7.21□□□□□ -1.26
RGD2YFL047W YDR338CQ05497 695 aa7.21□□□□□ -1.26
RGD2YFL047W CSR1Q06705 408 aaKnown RBP7.21□□□□□ -1.26
RGD2YFL047W RIO1Q12196 484 aaKnown RBP7.21□□□□□ -1.26
RGD2YFL047W SPO21Q12411 609 aa7.21□□□□□ -1.26
RGD2YFL047W KRS1P15180 591 aaKnown RBP7.2□□□□□ -1.26
RGD2YFL047W YKL050CP35736 922 aa7.2□□□□□ -1.26
RGD2YFL047W OAF3P36023 863 aa7.2□□□□□ -1.26
RGD2YFL047W UBP11P36026 717 aa7.2□□□□□ -1.26
RGD2YFL047W KEL1P38853 1164 aaKnown RBP7.2□□□□□ -1.26
RGD2YFL047W TIF4631P39935 952 aaKnown RBP7.2□□□□□ -1.26
RGD2YFL047W VHR2P40041 505 aa7.2□□□□□ -1.26
RGD2YFL047W NMD5P46970 1048 aa7.2□□□□□ -1.26
RGD2YFL047W RIM8P53179 542 aa7.2□□□□□ -1.26
RGD2YFL047W USA1Q03714 838 aa7.2□□□□□ -1.26
RGD2YFL047W PCK1P10963 549 aa7.19□□□□□ -1.26
RGD2YFL047W ESS1P22696 170 aa7.19□□□□□ -1.26
RGD2YFL047W PRP22P24384 1145 aaKnown RBP7.19□□□□□ -1.26
RGD2YFL047W UBC6P33296 250 aaPredicted RBP7.19□□□□□ -1.26
RGD2YFL047W LCP5P40079 357 aaPredicted RBP7.19□□□□□ -1.26
RGD2YFL047W GPD2P41911 440 aaKnown RBP7.19□□□□□ -1.26
RGD2YFL047W TDA9Q04545 1251 aa7.19□□□□□ -1.26
RGD2YFL047W AIM41Q12032 185 aa7.19□□□□□ -1.26
RGD2YFL047W BLI1P35727 113 aa7.19□□□□□ -1.26
RGD2YFL047W STV1P37296 890 aa7.19□□□□□ -1.26
RGD2YFL047W MRX1P40050 688 aa7.19□□□□□ -1.26
RGD2YFL047W BRO1P48582 844 aa7.19□□□□□ -1.26
RGD2YFL047W SNU71P53207 620 aaKnown RBP7.19□□□□□ -1.26
RGD2YFL047W ESBP6P53918 673 aa7.19□□□□□ -1.26
RGD2YFL047W EEB1Q02891 456 aa7.19□□□□□ -1.26
RGD2YFL047W YMR018WQ04364 514 aa7.19□□□□□ -1.26
RGD2YFL047W YLR326WQ06170 240 aaKnown RBP7.19□□□□□ -1.26
RGD2YFL047W PIG1Q06216 648 aa7.19□□□□□ -1.26
RGD2YFL047W YLR462WO13556 202 aa7.18□□□□□ -1.26
RGD2YFL047W SRD1P09007 221 aa7.18□□□□□ -1.26
RGD2YFL047W CLN3P13365 580 aa7.18□□□□□ -1.26
RGD2YFL047W TRZ1P36159 838 aaPredicted RBP7.18□□□□□ -1.26
RGD2YFL047W YHL049CP38722 271 aa7.18□□□□□ -1.26
RGD2YFL047W YEL075CP39972 122 aa7.18□□□□□ -1.26
RGD2YFL047W KAP123P40069 1113 aaKnown RBP7.18□□□□□ -1.26
RGD2YFL047W YER189WP40104 122 aa7.18□□□□□ -1.26
RGD2YFL047W SMX2P40204 77 aaKnown RBP7.18□□□□□ -1.26
RGD2YFL047W YFL064CP43540 174 aa7.18□□□□□ -1.26
RGD2YFL047W ALD6P54115 500 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 5,963 RNA–protein pairs in 60.9 ms