RNA–Protein interactions for RNA: YDR119W

VBA4, Transcript of Protein of unknown function, yeast

Gene VBA4, Length 2,307 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VBA4	YDR119W	VTI1	Q04338	217 aa		3.6	□□□□□ -1.83
VBA4	YDR119W	PEX15	Q08215	383 aa		3.6	□□□□□ -1.83
VBA4	YDR119W	YOL114C	Q12322	202 aa		3.6	□□□□□ -1.83
VBA4	YDR119W	NAT1	P12945	854 aa	Known RBP	3.59	□□□□□ -1.83
VBA4	YDR119W	DHR2	P36009	735 aa	Predicted RBP	3.59	□□□□□ -1.83
VBA4	YDR119W	MCM7	P38132	845 aa		3.59	□□□□□ -1.83
VBA4	YDR119W	CAF16	P43569	289 aa		3.59	□□□□□ -1.83
VBA4	YDR119W	RET2	P43621	546 aa		3.59	□□□□□ -1.83
VBA4	YDR119W	BFA1	P47113	574 aa		3.59	□□□□□ -1.83
VBA4	YDR119W	YGR153W	P48238	217 aa		3.59	□□□□□ -1.83
VBA4	YDR119W	RBG2	P53295	368 aa	Known RBP	3.59	□□□□□ -1.83
VBA4	YDR119W	SAS4	Q04003	481 aa		3.59	□□□□□ -1.83
VBA4	YDR119W	YDR286C	Q05530	114 aa		3.59	□□□□□ -1.83
VBA4	YDR119W	CIA1	Q05583	330 aa		3.59	□□□□□ -1.83
VBA4	YDR119W	AOS1	Q06624	347 aa		3.59	□□□□□ -1.83
VBA4	YDR119W	HIM1	Q06674	414 aa		3.59	□□□□□ -1.83
VBA4	YDR119W	RRG1	Q12167	365 aa	Predicted RBP	3.59	□□□□□ -1.83
VBA4	YDR119W	RPC31	P17890	251 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	ACE2	P21192	770 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	RET1	P22276	1149 aa	Known RBP	3.59	□□□□□ -1.84
VBA4	YDR119W	RAD16	P31244	790 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	IRE1	P32361	1115 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.59	□□□□□ -1.84	not detected
VBA4	YDR119W	YKU70	P32807	602 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	SEG2	P34250	1132 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	MUD2	P36084	527 aa	Known RBP	3.59	□□□□□ -1.84
VBA4	YDR119W	RIM11	P38615	370 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	CCT3	P39077	534 aa	Known RBP	3.59	□□□□□ -1.84
VBA4	YDR119W	DLD3	P39976	496 aa	Known RBP	3.59	□□□□□ -1.84
VBA4	YDR119W	RAD26	P40352	1085 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3.59	□□□□□ -1.84	not detected
VBA4	YDR119W	YML6	P51998	286 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	CNM67	P53865	581 aa	Known RBP	3.59	□□□□□ -1.84
VBA4	YDR119W	MRPL19	P53875	158 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	SKY1	Q03656	742 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	SPO71	Q03868	1245 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	TDA9	Q04545	1251 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	DFG5	Q05031	458 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	SGD1	Q06132	899 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	RRP9	Q06506	573 aa	Known RBP	3.59	□□□□□ -1.84
VBA4	YDR119W	BRE4	Q07660	1125 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	ISA1	Q07821	250 aa	Predicted RBP	3.59	□□□□□ -1.84
VBA4	YDR119W	DPH6	Q12429	685 aa		3.59	□□□□□ -1.84
VBA4	YDR119W	ENA1	P13587	1091 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	DBP5	P20449	482 aa	Known RBP	3.58	□□□□□ -1.84
VBA4	YDR119W	MSH1	P25846	959 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	CMK1	P27466	446 aa	Known RBP	3.58	□□□□□ -1.84
VBA4	YDR119W	MDJ1	P35191	511 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	SRP72	P38688	640 aa	Known RBP	3.58	□□□□□ -1.84
VBA4	YDR119W	SIT1	P39980	628 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	NOP16	P40007	231 aa	Known RBP	3.58	□□□□□ -1.84
VBA4	YDR119W	UPF3	P48412	387 aa	Known RBP	3.58	□□□□□ -1.84
VBA4	YDR119W	AIM14	P53109	570 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	ENA2	Q01896	1091 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	HAP5	Q02516	242 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	GSF2	Q04697	403 aa	Known RBP	3.58	□□□□□ -1.84
VBA4	YDR119W	ECM38	Q05902	660 aa	Predicted RBP	3.58	□□□□□ -1.84
VBA4	YDR119W	EST2	Q06163	884 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	YPL191C	Q08930	360 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	TAH18	Q12181	623 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	ENA5	Q12691	1091 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	GFA1	P14742	717 aa	Known RBP	3.58	□□□□□ -1.84
VBA4	YDR119W	RGP1	P16664	663 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	AAC3	P18238	307 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	PAH1	P32567	862 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	LRP1	P38801	184 aa	Known RBP	3.58	□□□□□ -1.84
VBA4	YDR119W	SIP5	P40210	489 aa	Known RBP	3.58	□□□□□ -1.84
VBA4	YDR119W	YTA6	P40328	754 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	ECM9	Q02202	377 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	TIM50	Q02776	476 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	GRX3	Q03835	250 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	TAF11	Q04226	346 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	YKU80	Q04437	629 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	ATG33	Q06485	197 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	PGC1	Q08959	321 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	LAP2	Q10740	671 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	YPR027C	Q12079	277 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	WSC3	Q12215	556 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	SMC6	Q12749	1114 aa		3.58	□□□□□ -1.84
VBA4	YDR119W	HOG1	P32485	435 aa		3.57	□□□□□ -1.84
VBA4	YDR119W	POP2	P39008	433 aa		3.57	□□□□□ -1.84
VBA4	YDR119W	RGA1	P39083	1007 aa		3.57	□□□□□ -1.84
VBA4	YDR119W	KAP123	P40069	1113 aa	Known RBP	3.57	□□□□□ -1.84
VBA4	YDR119W	JEM1	P40358	645 aa		3.57	□□□□□ -1.84
VBA4	YDR119W	CCT5	P40413	562 aa	Known RBP	3.57	□□□□□ -1.84
VBA4	YDR119W	YIL165C	P40446	119 aa		3.57	□□□□□ -1.84
VBA4	YDR119W	FRK1	Q03002	865 aa	Predicted RBP	3.57	□□□□□ -1.84
VBA4	YDR119W	SYF1	Q04048	859 aa	Predicted RBP	3.57	□□□□□ -1.84
VBA4	YDR119W	ARA2	Q04212	335 aa		3.57	□□□□□ -1.84
VBA4	YDR119W	RSC3	Q06639	885 aa		3.57	□□□□□ -1.84
VBA4	YDR119W	BI4	P03879	638 aa		3.56	□□□□□ -1.84
VBA4	YDR119W	HMG1	P12683	1054 aa		3.56	□□□□□ -1.84
VBA4	YDR119W	DAL7	P21826	554 aa		3.56	□□□□□ -1.84
VBA4	YDR119W	SIS1	P25294	352 aa	Known RBP	3.56	□□□□□ -1.84
VBA4	YDR119W	YBR238C	P38330	731 aa	Known RBP	3.56	□□□□□ -1.84
VBA4	YDR119W	MXR1	P40029	184 aa		3.56	□□□□□ -1.84
VBA4	YDR119W	IRC6	P43615	237 aa		3.56	□□□□□ -1.84
VBA4	YDR119W	VPS53	P47061	822 aa		3.56	□□□□□ -1.84
VBA4	YDR119W	ZIP2	P53061	704 aa		3.56	□□□□□ -1.84
VBA4	YDR119W	PCL10	P53124	433 aa		3.56	□□□□□ -1.84

Retrieved 100 of 5,963 RNA–protein pairs in 14.2 ms