RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W SPA2P23201 1466 aaKnown RBP6.31□□□□□ -1.4
VMS1YDR049W MET8P15807 274 aa6.31□□□□□ -1.4
VMS1YDR049W PFK1P16861 987 aaKnown RBP6.31□□□□□ -1.4
VMS1YDR049W SEC2P17065 759 aa6.31□□□□□ -1.4
VMS1YDR049W AAC3P18238 307 aa6.31□□□□□ -1.4
VMS1YDR049W PRP9P19736 530 aaKnown RBP6.31□□□□□ -1.4
VMS1YDR049W VBA3P25594 458 aa6.31□□□□□ -1.4
VMS1YDR049W FUN30P31380 1131 aa6.31□□□□□ -1.4
VMS1YDR049W TFB1P32776 642 aa6.31□□□□□ -1.4
VMS1YDR049W NPL6P32832 435 aa6.31□□□□□ -1.4
VMS1YDR049W UGA4P32837 571 aa6.31□□□□□ -1.4
VMS1YDR049W SMC1P32908 1225 aa6.31□□□□□ -1.4
VMS1YDR049W MUD2P36084 527 aaKnown RBP6.31□□□□□ -1.4
VMS1YDR049W HST1P53685 503 aa6.31□□□□□ -1.4
VMS1YDR049W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
VMS1YDR049W TIM50Q02776 476 aa6.31□□□□□ -1.4
VMS1YDR049W ADI1Q03677 179 aa6.31□□□□□ -1.4
VMS1YDR049W HDA3Q06623 655 aa6.31□□□□□ -1.4
VMS1YDR049W YDL073WQ07454 984 aa6.31□□□□□ -1.4
VMS1YDR049W CLP1Q08685 445 aaPredicted RBP6.31□□□□□ -1.4
VMS1YDR049W SSM4P40318 1319 aa6.31□□□□□ -1.4
VMS1YDR049W YMR084WA2P2R3 262 aa6.3□□□□□ -1.4
VMS1YDR049W ILS1P09436 1072 aaKnown RBP6.3□□□□□ -1.4
VMS1YDR049W GSY1P23337 708 aa6.3□□□□□ -1.4
VMS1YDR049W PAH1P32567 862 aa6.3□□□□□ -1.4
VMS1YDR049W SPO74P45819 413 aa6.3□□□□□ -1.4
VMS1YDR049W HOT1Q03213 719 aa6.3□□□□□ -1.4
VMS1YDR049W CUE5Q08412 411 aaKnown RBP6.3□□□□□ -1.4
VMS1YDR049W DBF4P32325 704 aa6.3□□□□□ -1.4
VMS1YDR049W PRP19P32523 503 aaKnown RBP6.3□□□□□ -1.4
VMS1YDR049W ARC19P33204 171 aaKnown RBP6.3□□□□□ -1.4
VMS1YDR049W OTU2P38747 307 aaKnown RBP6.3□□□□□ -1.4
VMS1YDR049W OAF1P39720 1047 aaPredicted RBP6.3□□□□□ -1.4
VMS1YDR049W MDE1P47095 244 aa6.3□□□□□ -1.4
VMS1YDR049W YJR096WP47137 282 aa6.3□□□□□ -1.4
VMS1YDR049W MET13P53128 600 aa6.3□□□□□ -1.4
VMS1YDR049W GUP1P53154 560 aa6.3□□□□□ -1.4
VMS1YDR049W NMA111P53920 997 aa6.3□□□□□ -1.4
VMS1YDR049W SEC5P89102 971 aa6.3□□□□□ -1.4
VMS1YDR049W PRP42Q03776 544 aaKnown RBP6.3□□□□□ -1.4
VMS1YDR049W TAP42Q04372 366 aa6.3□□□□□ -1.4
VMS1YDR049W MRL1Q06815 381 aa6.3□□□□□ -1.4
VMS1YDR049W YTM1Q12024 460 aaPredicted RBP6.3□□□□□ -1.4
VMS1YDR049W RUD3Q12234 484 aaKnown RBP6.3□□□□□ -1.4
VMS1YDR049W TRP2P00899 507 aaKnown RBP6.29□□□□□ -1.4
VMS1YDR049W BYE1P36106 594 aa6.29□□□□□ -1.4
VMS1YDR049W AMN1P38285 549 aaPredicted RBP6.29□□□□□ -1.4
VMS1YDR049W SIT1P39980 628 aa6.29□□□□□ -1.4
VMS1YDR049W TOK1P40310 691 aa6.29□□□□□ -1.4
VMS1YDR049W PCL10P53124 433 aa6.29□□□□□ -1.4
VMS1YDR049W YGR130CP53278 816 aa6.29□□□□□ -1.4
VMS1YDR049W ULP1Q02724 621 aa6.29□□□□□ -1.4
VMS1YDR049W BLS1Q06071 122 aa6.29□□□□□ -1.4
VMS1YDR049W DBP9Q06218 594 aaKnown RBP6.29□□□□□ -1.4
VMS1YDR049W PCL8Q08966 492 aa6.29□□□□□ -1.4
VMS1YDR049W RPS6AP0CX37 236 aaKnown RBP6.28□□□□□ -1.4
VMS1YDR049W RPS6BP0CX38 236 aaPredicted RBP6.28□□□□□ -1.4
VMS1YDR049W PDX1P16451 410 aa6.28□□□□□ -1.4
VMS1YDR049W HEM12P32347 362 aaPredicted RBP6.28□□□□□ -1.4
VMS1YDR049W ATG19P35193 415 aa6.28□□□□□ -1.4
VMS1YDR049W HSM3P38348 480 aa6.28□□□□□ -1.4
VMS1YDR049W SBE2P42223 864 aaKnown RBP6.28□□□□□ -1.4
VMS1YDR049W LEM3P42838 414 aa6.28□□□□□ -1.4
VMS1YDR049W LAM5P43560 674 aa6.28□□□□□ -1.4
VMS1YDR049W YJL055WP47044 245 aa6.28□□□□□ -1.4
VMS1YDR049W GNP1P48813 663 aa6.28□□□□□ -1.4
VMS1YDR049W SPO1P53541 631 aa6.28□□□□□ -1.4
VMS1YDR049W TIM10P87108 93 aa6.28□□□□□ -1.4
VMS1YDR049W GAD1Q04792 585 aa6.28□□□□□ -1.4
VMS1YDR049W ARP9Q05123 467 aa6.28□□□□□ -1.4
VMS1YDR049W ISR1Q06098 443 aaKnown RBP6.28□□□□□ -1.4
VMS1YDR049W CDC73Q06697 393 aa6.28□□□□□ -1.4
VMS1YDR049W MER1P16523 270 aa6.28□□□□□ -1.4
VMS1YDR049W MRPL25P23369 157 aa6.28□□□□□ -1.4
VMS1YDR049W MDJ1P35191 511 aa6.28□□□□□ -1.4
VMS1YDR049W YHR131CP38835 850 aa6.28□□□□□ -1.4
VMS1YDR049W CCC2P38995 1004 aa6.28□□□□□ -1.4
VMS1YDR049W PSY2P40164 858 aa6.28□□□□□ -1.4
VMS1YDR049W VHR1P40522 640 aa6.28□□□□□ -1.4
VMS1YDR049W FYV8P46949 817 aaKnown RBP6.28□□□□□ -1.4
VMS1YDR049W RAD17P48581 401 aa6.28□□□□□ -1.4
VMS1YDR049W EAR1Q03212 550 aa6.28□□□□□ -1.4
VMS1YDR049W RMP1Q12530 201 aa6.28□□□□□ -1.4
VMS1YDR049W GFA1P14742 717 aaKnown RBP6.27□□□□□ -1.41
VMS1YDR049W SEC18P18759 758 aaKnown RBP6.27□□□□□ -1.41
VMS1YDR049W DAL7P21826 554 aa6.27□□□□□ -1.41
VMS1YDR049W DAL3P32459 195 aa6.27□□□□□ -1.41
VMS1YDR049W LYP1P32487 611 aa6.27□□□□□ -1.41
VMS1YDR049W IXR1P33417 597 aa6.27□□□□□ -1.41
VMS1YDR049W SEG2P34250 1132 aa6.27□□□□□ -1.41
VMS1YDR049W MTH1P35198 433 aa6.27□□□□□ -1.41
VMS1YDR049W MCM7P38132 845 aa6.27□□□□□ -1.41
VMS1YDR049W FTH1P38310 465 aa6.27□□□□□ -1.41
VMS1YDR049W BIT2P38346 545 aa6.27□□□□□ -1.41
VMS1YDR049W KAP123P40069 1113 aaKnown RBP6.27□□□□□ -1.41
VMS1YDR049W RAD26P40352 1085 aa6.27□□□□□ -1.41
VMS1YDR049W VPS53P47061 822 aa6.27□□□□□ -1.41
VMS1YDR049W DPL1Q05567 589 aa6.27□□□□□ -1.41
VMS1YDR049W YLR225CQ05948 407 aaKnown RBP6.27□□□□□ -1.41
VMS1YDR049W RKM4Q12504 494 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms