RNA–Protein interactions for RNA: YDL058W

USO1, Transcript of Essential protein involved in vesicle-mediated ER to Golgi transport, yeastyeast

Gene USO1, Length 5,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USO1YDL058W ACA1P39970 489 aa2.17□□□□□ -2.06
USO1YDL058W ESL1P40456 1118 aa2.17□□□□□ -2.06
USO1YDL058W FYV10P40492 516 aa2.17□□□□□ -2.06
USO1YDL058W COP1P53622 1201 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W REG1Q00816 1014 aa2.17□□□□□ -2.06
USO1YDL058W HOS3Q02959 697 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W RTT103Q05543 409 aa2.17□□□□□ -2.06
USO1YDL058W TRE2Q08693 809 aa2.17□□□□□ -2.06
USO1YDL058W FUM1P08417 488 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W SUI2P20459 304 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W MRPL8P22353 238 aa2.17□□□□□ -2.06
USO1YDL058W YRB2P40517 327 aa2.17□□□□□ -2.06
USO1YDL058W VPS53P47061 822 aa2.17□□□□□ -2.06
USO1YDL058W FMS1P50264 508 aa2.17□□□□□ -2.06
USO1YDL058W RPN14P53196 417 aa2.17□□□□□ -2.06
USO1YDL058W RRN5Q02983 363 aa2.17□□□□□ -2.06
USO1YDL058W SYO1Q07395 620 aa2.17□□□□□ -2.06
USO1YDL058W CRD1Q07560 283 aa2.17□□□□□ -2.06
USO1YDL058W LDB17Q12342 491 aa2.17□□□□□ -2.06
USO1YDL058W ZRT2Q12436 422 aa2.17□□□□□ -2.06
USO1YDL058W PGA3Q12746 312 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W MDM12Q92328 271 aa2.17□□□□□ -2.06
USO1YDL058W PMS1P14242 873 aa2.17□□□□□ -2.06
USO1YDL058W ACO1P19414 778 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
USO1YDL058W OPI1P21957 404 aa2.17□□□□□ -2.06
USO1YDL058W IRE1P32361 1115 aa2.17□□□□□ -2.06
USO1YDL058W GRX4P32642 244 aa2.17□□□□□ -2.06
USO1YDL058W YKU70P32807 602 aa2.17□□□□□ -2.06
USO1YDL058W HSP78P33416 811 aa2.17□□□□□ -2.06
USO1YDL058W ATP3P38077 311 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W CCT3P39077 534 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W SEC26P41810 973 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W VTC4P47075 721 aa2.17□□□□□ -2.06
USO1YDL058W DAM1P53267 343 aa2.17□□□□□ -2.06
USO1YDL058W KTR6P54070 446 aa2.17□□□□□ -2.06
USO1YDL058W BET4Q00618 327 aa2.17□□□□□ -2.06
USO1YDL058W MAK10Q02197 733 aa2.17□□□□□ -2.06
USO1YDL058W RAD33Q04231 177 aa2.17□□□□□ -2.06
USO1YDL058W YPL277CQ08989 487 aa2.17□□□□□ -2.06
USO1YDL058W BAG7Q12128 409 aa2.17□□□□□ -2.06
USO1YDL058W LSO2Q3E772 92 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W RAD50P12753 1312 aa2.17□□□□□ -2.06
USO1YDL058W BPT1P14772 1559 aa2.17□□□□□ -2.06
USO1YDL058W SEN2P16658 377 aa2.17□□□□□ -2.06
USO1YDL058W YCL049CP25577 312 aa2.17□□□□□ -2.06
USO1YDL058W FEN2P25621 512 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W MOT2P34909 587 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W ESL2P36168 1195 aa2.17□□□□□ -2.06
USO1YDL058W RVS167P39743 482 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W SCC4P40090 624 aa2.17□□□□□ -2.06
USO1YDL058W YMR134WP40207 237 aa2.17□□□□□ -2.06
USO1YDL058W CCT5P40413 562 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W MPH1P40562 993 aa2.17□□□□□ -2.06
USO1YDL058W SBE2P42223 864 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W GUS1P46655 708 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
USO1YDL058W TRF5P48561 642 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W APT1P49435 187 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W LYS5P50113 272 aa2.17□□□□□ -2.06
USO1YDL058W TAF6P53040 516 aa2.17□□□□□ -2.06
USO1YDL058W IST1P53843 298 aaPredicted RBP2.17□□□□□ -2.06
USO1YDL058W TAF8Q03750 510 aa2.17□□□□□ -2.06
USO1YDL058W GAD1Q04792 585 aa2.17□□□□□ -2.06
USO1YDL058W ALR1Q08269 859 aa2.17□□□□□ -2.06
USO1YDL058W YPL260WQ08977 551 aa2.17□□□□□ -2.06
USO1YDL058W FAL1Q12099 399 aaKnown RBP2.17□□□□□ -2.06
USO1YDL058W CFT2Q12102 859 aaPredicted RBP2.17□□□□□ -2.06
USO1YDL058W STB3Q12427 513 aa2.17□□□□□ -2.06
USO1YDL058W PHO4P07270 312 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W DAL5P15365 543 aa2.16□□□□□ -2.06
USO1YDL058W GRX7P38068 203 aa2.16□□□□□ -2.06
USO1YDL058W MCX1P38323 520 aaPredicted RBP2.16□□□□□ -2.06
USO1YDL058W FSH1P38777 243 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W TIF4631P39935 952 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W PTP3P40048 928 aa2.16□□□□□ -2.06
USO1YDL058W UFE1P41834 346 aa2.16□□□□□ -2.06
USO1YDL058W RPA34P47006 233 aaPredicted RBP2.16□□□□□ -2.06
USO1YDL058W MAL11P53048 616 aa2.16□□□□□ -2.06
USO1YDL058W NSA1P53136 463 aaPredicted RBP2.16□□□□□ -2.06
USO1YDL058W YGR053CP53234 283 aa2.16□□□□□ -2.06
USO1YDL058W RNH70P53331 553 aa2.16□□□□□ -2.06
USO1YDL058W FYV6P53913 173 aa2.16□□□□□ -2.06
USO1YDL058W YDR090CQ03193 310 aa2.16□□□□□ -2.06
USO1YDL058W JIP4Q03361 876 aa2.16□□□□□ -2.06
USO1YDL058W ATC1Q04005 294 aa2.16□□□□□ -2.06
USO1YDL058W GIS4Q04233 774 aa2.16□□□□□ -2.06
USO1YDL058W PEX15Q08215 383 aa2.16□□□□□ -2.06
USO1YDL058W YOR022CQ12204 715 aa2.16□□□□□ -2.06
USO1YDL058W SEY1Q99287 776 aa2.16□□□□□ -2.06
USO1YDL058W SWI5P08153 709 aa2.16□□□□□ -2.06
USO1YDL058W SPO16P17122 198 aa2.16□□□□□ -2.06
USO1YDL058W LCB1P25045 558 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W REC114P32841 428 aa2.16□□□□□ -2.06
USO1YDL058W SRB2P34162 210 aa2.16□□□□□ -2.06
USO1YDL058W YKL063CP35725 167 aa2.16□□□□□ -2.06
USO1YDL058W MAL31P38156 614 aa2.16□□□□□ -2.06
USO1YDL058W BCD1P38772 366 aa2.16□□□□□ -2.06
USO1YDL058W TGL3P40308 642 aa2.16□□□□□ -2.06
USO1YDL058W GZF3P42944 551 aaKnown RBP2.16□□□□□ -2.06
USO1YDL058W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.16□□□□□ -2.06not detected
USO1YDL058W TEA1P47988 759 aa2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms