RNA–Protein interactions for RNA: ENST00000618972.4

NEB-220, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 26,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-220ENST00000618972 AMPHP49418 695 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 GJC2Q5T442 439 aaPredicted RBP3.57□□□□□ -1.84
NEB-220ENST00000618972 SRCIN1Q9C0H9 1055 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 HIP1O00291 1037 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 TXLNAP40222 546 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 GPATCH11Q8N954 259 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CCDC38Q502W7 563 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 PPFIBP1Q86W92 1011 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 PPFIA2O75334 1257 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CEP104O60308 925 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 TDO2P48775 406 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 KANK3Q6NY19 840 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CCDC110Q8TBZ0 833 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CACTINQ8WUQ7 758 aaKnown RBP3.57□□□□□ -1.84
NEB-220ENST00000618972 ESYT1Q9BSJ8 1104 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 KCNF1Q9H3M0 494 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 DACH1Q9UI36 760 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 GABPB1Q06547 395 aaPredicted RBP3.57□□□□□ -1.84
NEB-220ENST00000618972 NOL7Q9UMY1 257 aaKnown RBP3.57□□□□□ -1.84
NEB-220ENST00000618972 ATL3Q6DD88 541 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 OPA1O60313 960 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 PRXQ9BXM0 1461 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 VPS37CA5D8V6 355 aaPredicted RBP3.57□□□□□ -1.84
NEB-220ENST00000618972 ZFYP08048 801 aaPredicted RBP3.57□□□□□ -1.84
NEB-220ENST00000618972 SPECC1Q5M775 1068 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 TTC22Q5TAA0 569 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CEP85Q6P2H3 762 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 ANKRD44Q8N8A2 993 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CHL1O00533 1208 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CCDC180Q9P1Z9 1646 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 TTC36A6NLP5 189 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 SMC2O95347 1197 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 SYT1P21579 422 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 SAFBQ15424 915 aaKnown RBP eCLIP3.57□□□□□ -1.84
NEB-220ENST00000618972 OTUD6BQ8N6M0 293 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 SNX14Q9Y5W7 946 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 SLMAPQ14BN4 828 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CBX8Q9HC52 389 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 SMC3Q9UQE7 1217 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 TNNT1P13805 278 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 HSP90AA5PQ58FG0 334 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 GFM2Q969S9 779 aaKnown RBP3.57□□□□□ -1.84
NEB-220ENST00000618972 TAOK3Q9H2K8 898 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 LMBR1Q8WVP7 490 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 RTF1Q92541 710 aaKnown RBP3.57□□□□□ -1.84
NEB-220ENST00000618972 CCDC77Q9BR77 488 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 CCDC82Q8N4S0 544 aa3.57□□□□□ -1.84
NEB-220ENST00000618972 TFRCP02786 760 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 CCDC148Q8NFR7 591 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 LARSQ9P2J5 1176 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 SNAP23O00161 211 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 NAA15Q9BXJ9 866 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 FMN1Q68DA7 1419 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 MCM6Q14566 821 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 FOXR1Q6PIV2 292 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 CASQ1P31415 396 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 CTCFLQ8NI51 663 aaPredicted RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 ZNF853P0CG23 659 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 SBNO2Q9Y2G9 1366 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 SF3B2Q13435 895 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 INTS3Q68E01 1043 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 GCC1Q96CN9 775 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 CRACR2AQ9BSW2 395 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 CEP83Q9Y592 693 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 NINLQ9Y2I6 1382 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 MPHOSPH10O00566 681 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 FGFR1OPO95684 399 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 NLRP6P59044 892 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 GNAI2P04899 355 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 BMP2KQ9NSY1 1161 aaPredicted RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 HSPA4P34932 840 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 EPHA10Q5JZY3 1008 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 HDXQ7Z353 690 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 LARP1Q6PKG0 1096 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 TPCN1Q9ULQ1 816 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 SKILP12757 684 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 NEUROD6Q96NK8 337 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 WTIPA6NIX2 430 aaPredicted RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 SMIM22K7EJ46 135 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 NBPF7P0C2Y1 421 aaPredicted RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 PAFAH1B1P43034 410 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 API5Q9BZZ5 524 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 EIF4A2Q14240 407 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 CCDC144BQ3MJ40 725 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 CCDC144CPQ8IYA2 1237 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 TCHPQ9BT92 498 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 SECISBP2LQ93073 1101 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 CTAGE6Q86UF2 777 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 STMN4Q9H169 189 aaPredicted RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 PLEKHA4Q9H4M7 779 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 ZSCAN20P17040 1043 aaPredicted RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 TRIM29Q14134 588 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 ERC1Q8IUD2 1116 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 ARFGAP2Q8N6H7 521 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 RSRC1Q96IZ7 334 aaKnown RBP3.56□□□□□ -1.84
NEB-220ENST00000618972 EYA1Q99502 592 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 PSMD7P51665 324 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 KLHL10Q6JEL2 608 aa3.56□□□□□ -1.84
NEB-220ENST00000618972 ESF1Q9H501 851 aaKnown RBP3.55□□□□□ -1.84
NEB-220ENST00000618972 NGDNQ8NEJ9 315 aaKnown RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms