RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 MRE11P49959 708 aa4.41□□□□□ -1.7
SMC5-204ENST00000618375 GAS6Q14393 721 aa4.41□□□□□ -1.7
SMC5-204ENST00000618375 TLR1Q15399 786 aa4.41□□□□□ -1.7
SMC5-204ENST00000618375 NBPF1Q3BBV0 1214 aa4.41□□□□□ -1.7
SMC5-204ENST00000618375 HSP90AB3PQ58FF7 597 aa4.41□□□□□ -1.7
SMC5-204ENST00000618375 TMED8Q6PL24 325 aaPredicted RBP4.41□□□□□ -1.7
SMC5-204ENST00000618375 EGFL6Q8IUX8 553 aa4.41□□□□□ -1.7
SMC5-204ENST00000618375 BACH2Q9BYV9 841 aa4.41□□□□□ -1.7
SMC5-204ENST00000618375 EFCC1Q9HA90 598 aa4.41□□□□□ -1.7
SMC5-204ENST00000618375 PHF24Q9UPV7 400 aa4.41□□□□□ -1.7
SMC5-204ENST00000618375 TNIKQ9UKE5 1360 aa4.4□□□□□ -1.7
SMC5-204ENST00000618375 PATL2C9JE40 543 aaKnown RBP4.4□□□□□ -1.71
SMC5-204ENST00000618375 GPR37L1O60883 481 aa4.4□□□□□ -1.71
SMC5-204ENST00000618375 WASHC4Q2M389 1173 aa4.4□□□□□ -1.71
SMC5-204ENST00000618375 EFHC2Q5JST6 749 aa4.4□□□□□ -1.71
SMC5-204ENST00000618375 GPAT2Q6NUI2 795 aa4.4□□□□□ -1.71
SMC5-204ENST00000618375 CEP164Q9UPV0 1460 aa4.4□□□□□ -1.71
SMC5-204ENST00000618375 PRDM2Q13029 1718 aa4.4□□□□□ -1.71
SMC5-204ENST00000618375 CCDC66A2RUB6 948 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 PHF20L1A8MW92 1017 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 ARHGEF15O94989 841 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 BCRP11274 1271 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 NBPF9Q3BBW0 867 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 TSGA10IPQ3SY00 556 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 KANK3Q6NY19 840 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 FAM43BQ6ZT52 329 aaPredicted RBP4.39□□□□□ -1.71
SMC5-204ENST00000618375 CREBRFQ8IUR6 639 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 BEND7Q8N7W2 519 aaPredicted RBP4.39□□□□□ -1.71
SMC5-204ENST00000618375 RHBDD1Q8TEB9 315 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 AIDAQ96BJ3 306 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 RUBCNLQ9H714 662 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 BSDC1Q9NW68 430 aaPredicted RBP4.39□□□□□ -1.71
SMC5-204ENST00000618375 RAI14Q9P0K7 980 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 RB1CC1Q8TDY2 1594 aa4.39□□□□□ -1.71
SMC5-204ENST00000618375 STAU1O95793 577 aaKnown RBP4.38□□□□□ -1.71
SMC5-204ENST00000618375 XRCC6P12956 609 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMC5-204ENST00000618375 AMPD1P23109 780 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 MAP2K3P46734 347 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 PLA2G4AP47712 749 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 SATB1Q01826 763 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 PSME1Q06323 249 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 IRF5Q13568 498 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 C4orf17Q53FE4 359 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 HS1BP3Q53T59 392 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 CTR9Q6PD62 1173 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 TBC1D9Q6ZT07 1266 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.38□□□□□ -1.71
SMC5-204ENST00000618375 GPATCH11Q8N954 259 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 PLPP7Q8NBV4 271 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 XAGE2Q96GT9 111 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 RRAGCQ9HB90 399 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 ETNK1Q9HBU6 452 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 IBTKQ9P2D0 1353 aaPredicted RBP4.38□□□□□ -1.71
SMC5-204ENST00000618375 UNC13AQ9UPW8 1703 aa4.38□□□□□ -1.71
SMC5-204ENST00000618375 TULP2O00295 520 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 FRAT2O75474 233 aaPredicted RBP4.37□□□□□ -1.71
SMC5-204ENST00000618375 BMP4P12644 408 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 UBTFP17480 764 aaKnown RBP4.37□□□□□ -1.71
SMC5-204ENST00000618375 MSX1P28360 303 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 MFAP1P55081 439 aaKnown RBP4.37□□□□□ -1.71
SMC5-204ENST00000618375 GDF10P55107 478 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 ANAPC15P60006 121 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 HNRNPUQ00839 825 aaKnown RBP eCLIP4.37□□□□□ -1.71
SMC5-204ENST00000618375 GABPB1Q06547 395 aaPredicted RBP4.37□□□□□ -1.71
SMC5-204ENST00000618375 MAP7D1Q3KQU3 841 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 ARSJQ5FYB0 599 aaPredicted RBP4.37□□□□□ -1.71
SMC5-204ENST00000618375 ZSCAN30Q86W11 494 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 ACDQ96AP0 544 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 CFHR5Q9BXR6 569 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 OXCT2Q9BYC2 517 aaPredicted RBP4.37□□□□□ -1.71
SMC5-204ENST00000618375 MYH16Q9H6N6 1097 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 RBM28Q9NW13 759 aaKnown RBP4.37□□□□□ -1.71
SMC5-204ENST00000618375 SERTAD1Q9UHV2 236 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 KIF3AQ9Y496 699 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 GJA3Q9Y6H8 435 aa4.37□□□□□ -1.71
SMC5-204ENST00000618375 DNMT3AQ9Y6K1 912 aaPredicted RBP4.37□□□□□ -1.71
SMC5-204ENST00000618375 RSF1Q96T23 1441 aaPredicted RBP4.37□□□□□ -1.71
SMC5-204ENST00000618375 RAD21O60216 631 aa4.36□□□□□ -1.71
SMC5-204ENST00000618375 SOX11P35716 441 aa4.36□□□□□ -1.71
SMC5-204ENST00000618375 GSK3AP49840 483 aa4.36□□□□□ -1.71
SMC5-204ENST00000618375 LBRQ14739 615 aaKnown RBP4.36□□□□□ -1.71
SMC5-204ENST00000618375 EML3Q32P44 896 aa4.36□□□□□ -1.71
SMC5-204ENST00000618375 GALNT6Q8NCL4 622 aa4.36□□□□□ -1.71
SMC5-204ENST00000618375 MYCBPQ99417 103 aaPredicted RBP4.36□□□□□ -1.71
SMC5-204ENST00000618375 NIFKQ9BYG3 293 aaKnown RBP4.36□□□□□ -1.71
SMC5-204ENST00000618375 FHDC1Q9C0D6 1143 aaPredicted RBP4.36□□□□□ -1.71
SMC5-204ENST00000618375 FAM13BQ9NYF5 915 aa4.36□□□□□ -1.71
SMC5-204ENST00000618375 POGKQ9P215 609 aa4.36□□□□□ -1.71
SMC5-204ENST00000618375 CNTNAP5Q8WYK1 1306 aa4.36□□□□□ -1.71
SMC5-204ENST00000618375 RAD50Q92878 1312 aa4.36□□□□□ -1.71
SMC5-204ENST00000618375 NCOA2Q15596 1464 aa4.36□□□□□ -1.71
SMC5-204ENST00000618375 MAPKBP1O60336 1514 aa4.36□□□□□ -1.71
SMC5-204ENST00000618375 UQCRHLA0A096LP55 91 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 OIP5O43482 229 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 ZNF500O60304 480 aaPredicted RBP4.35□□□□□ -1.71
SMC5-204ENST00000618375 INHAP05111 366 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 UQCRHP07919 91 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 SKIP12755 728 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 MCM5P33992 734 aa4.35□□□□□ -1.71
SMC5-204ENST00000618375 FOXK2Q01167 660 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms