RNA–Protein interactions for RNA: ENST00000605569.1

NDE1P2-201, Transcript of nudE neurodevelopment protein 1 pseudogene 2, humanhuman

BASIC

Gene NDE1P2, Length 1,105 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1P2-201ENST00000605569 RIC3Q7Z5B4 369 aa12.85□□□□□ -0.35
NDE1P2-201ENST00000605569 WBP1LQ9NX94 342 aa12.85□□□□□ -0.35
NDE1P2-201ENST00000605569 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
NDE1P2-201ENST00000605569 NINLQ9Y2I6 1382 aa12.84□□□□□ -0.35
NDE1P2-201ENST00000605569 MOXD2PA6NHM9 499 aa12.84□□□□□ -0.35
NDE1P2-201ENST00000605569 SPTLC1O15269 473 aa12.84□□□□□ -0.35
NDE1P2-201ENST00000605569 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
NDE1P2-201ENST00000605569 FUT2Q10981 343 aa12.84□□□□□ -0.35
NDE1P2-201ENST00000605569 ANKRD36BQ8N2N9 1353 aa12.83□□□□□ -0.36
NDE1P2-201ENST00000605569 TNS1Q9HBL0 1735 aaKnown RBP12.83□□□□□ -0.36
NDE1P2-201ENST00000605569 PARP4Q9UKK3 1724 aaKnown RBP12.83□□□□□ -0.36
NDE1P2-201ENST00000605569 HOXA2O43364 376 aa12.83□□□□□ -0.36
NDE1P2-201ENST00000605569 TRIM37O94972 964 aa12.83□□□□□ -0.36
NDE1P2-201ENST00000605569 GJA5P36382 358 aa12.83□□□□□ -0.36
NDE1P2-201ENST00000605569 ATP6V1AP38606 617 aa12.83□□□□□ -0.36
NDE1P2-201ENST00000605569 CLK2P49760 499 aaKnown RBP12.83□□□□□ -0.36
NDE1P2-201ENST00000605569 SF3B2Q13435 895 aaKnown RBP12.83□□□□□ -0.36
NDE1P2-201ENST00000605569 THRAP3Q9Y2W1 955 aaKnown RBP12.83□□□□□ -0.36
NDE1P2-201ENST00000605569 LTN1O94822 1766 aa12.83□□□□□ -0.36
NDE1P2-201ENST00000605569 LRRC37A3O60309 1634 aa12.82□□□□□ -0.36
NDE1P2-201ENST00000605569 CSB-PGBD3P0DP91 1061 aa12.82□□□□□ -0.36
NDE1P2-201ENST00000605569 NDUFV2P19404 249 aa12.82□□□□□ -0.36
NDE1P2-201ENST00000605569 PDE3BQ13370 1112 aa12.82□□□□□ -0.36
NDE1P2-201ENST00000605569 RSBN1LQ6PCB5 846 aaPredicted RBP12.82□□□□□ -0.36
NDE1P2-201ENST00000605569 SPNS2Q8IVW8 549 aa12.82□□□□□ -0.36
NDE1P2-201ENST00000605569 MYOM1P52179 1685 aa12.81□□□□□ -0.36
NDE1P2-201ENST00000605569 APLP1P51693 650 aa12.81□□□□□ -0.36
NDE1P2-201ENST00000605569 FAM196AQ6ZSG2 479 aa12.81□□□□□ -0.36
NDE1P2-201ENST00000605569 PROCA1Q8NCQ7 364 aaPredicted RBP12.81□□□□□ -0.36
NDE1P2-201ENST00000605569 CARD10Q9BWT7 1032 aa12.81□□□□□ -0.36
NDE1P2-201ENST00000605569 GTF3C3Q9Y5Q9 886 aa12.81□□□□□ -0.36
NDE1P2-201ENST00000605569 RGPD1P0DJD0 1748 aa12.81□□□□□ -0.36
NDE1P2-201ENST00000605569 WNK3Q9BYP7 1800 aa12.81□□□□□ -0.36
NDE1P2-201ENST00000605569 SRCAPQ6ZRS2 3230 aa12.81□□□□□ -0.36
NDE1P2-201ENST00000605569 DISP2A7MBM2 1401 aa12.8□□□□□ -0.36
NDE1P2-201ENST00000605569 ABCC6O95255 1503 aa12.8□□□□□ -0.36
NDE1P2-201ENST00000605569 FYB1O15117 783 aa12.8□□□□□ -0.36
NDE1P2-201ENST00000605569 PTPN5P54829 565 aa12.8□□□□□ -0.36
NDE1P2-201ENST00000605569 TUSC1Q2TAM9 212 aa12.8□□□□□ -0.36
NDE1P2-201ENST00000605569 NYAP1Q6ZVC0 841 aa12.8□□□□□ -0.36
NDE1P2-201ENST00000605569 CARD14Q9BXL6 1004 aa12.8□□□□□ -0.36
NDE1P2-201ENST00000605569 GGNBP2Q9H3C7 697 aa12.8□□□□□ -0.36
NDE1P2-201ENST00000605569 LIMD1Q9UGP4 676 aa12.8□□□□□ -0.36
NDE1P2-201ENST00000605569 PEAK1Q9H792 1746 aa12.79□□□□□ -0.36
NDE1P2-201ENST00000605569 FDX1P10109 184 aa12.79□□□□□ -0.36
NDE1P2-201ENST00000605569 HSPA5P11021 654 aaKnown RBP12.79□□□□□ -0.36
NDE1P2-201ENST00000605569 BAG6P46379 1132 aa12.79□□□□□ -0.36
NDE1P2-201ENST00000605569 PTF1AQ7RTS3 328 aa12.79□□□□□ -0.36
NDE1P2-201ENST00000605569 MAP3K19Q56UN5 1328 aa12.79□□□□□ -0.36
NDE1P2-201ENST00000605569 EZH2Q15910 746 aaKnown RBP12.78□□□□□ -0.36
NDE1P2-201ENST00000605569 DDB1Q16531 1140 aa12.78□□□□□ -0.36
NDE1P2-201ENST00000605569 MARCH10Q8NA82 808 aaPredicted RBP12.78□□□□□ -0.36
NDE1P2-201ENST00000605569 ANKRD24Q8TF21 1146 aa12.78□□□□□ -0.36
NDE1P2-201ENST00000605569 COG3Q96JB2 828 aa12.78□□□□□ -0.36
NDE1P2-201ENST00000605569 APBA3O96018 575 aa12.77□□□□□ -0.37
NDE1P2-201ENST00000605569 RRS1Q15050 365 aaKnown RBP12.77□□□□□ -0.37
NDE1P2-201ENST00000605569 CDCA8Q53HL2 280 aa12.77□□□□□ -0.37
NDE1P2-201ENST00000605569 IP6K1Q92551 441 aa12.77□□□□□ -0.37
NDE1P2-201ENST00000605569 LTV1Q96GA3 475 aaPredicted RBP12.77□□□□□ -0.37
NDE1P2-201ENST00000605569 CAMKK2Q96RR4 588 aa12.77□□□□□ -0.37
NDE1P2-201ENST00000605569 NLRP2Q9NX02 1062 aa12.77□□□□□ -0.37
NDE1P2-201ENST00000605569 MORN1Q5T089 497 aa12.76□□□□□ -0.37
NDE1P2-201ENST00000605569 POLR3GLQ9BT43 218 aa12.76□□□□□ -0.37
NDE1P2-201ENST00000605569 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.76□□□□□ -0.37
NDE1P2-201ENST00000605569 PCDHB3Q9Y5E6 796 aa12.76□□□□□ -0.37
NDE1P2-201ENST00000605569 CCDC7Q96M83 1385 aa12.76□□□□□ -0.37
NDE1P2-201ENST00000605569 NSD3Q9BZ95 1437 aa12.76□□□□□ -0.37
NDE1P2-201ENST00000605569 OVOS2A0A0G2JMS6 1433 aa12.75□□□□□ -0.37
NDE1P2-201ENST00000605569 HOXC9P31274 260 aa12.75□□□□□ -0.37
NDE1P2-201ENST00000605569 EIF4G2P78344 907 aaKnown RBP eCLIP12.75□□□□□ -0.37
NDE1P2-201ENST00000605569 PUS10Q3MIT2 529 aaKnown RBP12.75□□□□□ -0.37
NDE1P2-201ENST00000605569 HLA-CQ95604 372 aa12.75□□□□□ -0.37
NDE1P2-201ENST00000605569 PCDHB15Q9Y5E8 787 aa12.75□□□□□ -0.37
NDE1P2-201ENST00000605569 SBF2Q86WG5 1849 aa12.74□□□□□ -0.37
NDE1P2-201ENST00000605569 KIF20BQ96Q89 1820 aa12.74□□□□□ -0.37
NDE1P2-201ENST00000605569 C11orf95C9JLR9 678 aaPredicted RBP12.74□□□□□ -0.37
NDE1P2-201ENST00000605569 GUCA2AQ02747 115 aa12.74□□□□□ -0.37
NDE1P2-201ENST00000605569 CSPP1Q1MSJ5 1256 aa12.74□□□□□ -0.37
NDE1P2-201ENST00000605569 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
NDE1P2-201ENST00000605569 RGPD2P0DJD1 1756 aa12.74□□□□□ -0.37
NDE1P2-201ENST00000605569 TNS2Q63HR2 1409 aa12.73□□□□□ -0.37
NDE1P2-201ENST00000605569 AMPHP49418 695 aa12.73□□□□□ -0.37
NDE1P2-201ENST00000605569 CDCA7Q9BWT1 371 aaPredicted RBP12.73□□□□□ -0.37
NDE1P2-201ENST00000605569 PCDHGC3Q9UN70 934 aa12.73□□□□□ -0.37
NDE1P2-201ENST00000605569 EXOC5O00471 708 aa12.72□□□□□ -0.37
NDE1P2-201ENST00000605569 IL2RBP14784 551 aa12.72□□□□□ -0.37
NDE1P2-201ENST00000605569 PRPF38BQ5VTL8 546 aaKnown RBP12.72□□□□□ -0.37
NDE1P2-201ENST00000605569 SLC27A5Q9Y2P5 690 aa12.72□□□□□ -0.37
NDE1P2-201ENST00000605569 NR1I2O75469 434 aa12.71□□□□□ -0.37
NDE1P2-201ENST00000605569 R3HDM1Q15032 1099 aaKnown RBP12.71□□□□□ -0.37
NDE1P2-201ENST00000605569 HCSTQ9UBK5 93 aa12.71□□□□□ -0.37
NDE1P2-201ENST00000605569 RREB1Q92766 1687 aa12.7□□□□□ -0.38
NDE1P2-201ENST00000605569 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
NDE1P2-201ENST00000605569 KCNQ2O43526 872 aa12.7□□□□□ -0.38
NDE1P2-201ENST00000605569 LILRB3O75022 631 aa12.7□□□□□ -0.38
NDE1P2-201ENST00000605569 Q3C1V9 767 aa12.7□□□□□ -0.38
NDE1P2-201ENST00000605569 HSP90AB2PQ58FF8 381 aa12.7□□□□□ -0.38
NDE1P2-201ENST00000605569 USHBP1Q8N6Y0 703 aa12.7□□□□□ -0.38
NDE1P2-201ENST00000605569 ZBTB3Q9H5J0 574 aa12.7□□□□□ -0.38
NDE1P2-201ENST00000605569 EMILIN1Q9Y6C2 1016 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms