RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 WDR62O43379 1518 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 PEG3Q9GZU2 1588 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 PIK3CDO00329 1044 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 IL2RAP01589 272 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 BMP4P12644 408 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 AMPD1P23109 780 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 EML3Q32P44 896 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 KANK4Q5T7N3 995 aaPredicted RBP5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 PHLDB3Q6NSJ2 640 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 TMEM214Q6NUQ4 689 aaKnown RBP5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 TRIM50Q86XT4 487 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 SIRT1Q96EB6 747 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 XAGE2Q96GT9 111 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 RAB6BQ9NRW1 208 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 NOP53Q9NZM5 478 aaKnown RBP5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 HRH3Q9Y5N1 445 aa5.89□□□□□ -1.47
IGHV3-29-201ENST00000604817 RIMBP3CA6NJZ7 1639 aa5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 RIMBP3BA6NNM3 1639 aa5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 RIMBP3Q9UFD9 1639 aa5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 GNB5O14775 395 aa5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 COL8A1P27658 744 aa5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 PHKA2P46019 1235 aa5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 ATP1A2P50993 1020 aa5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 UBAP2LQ14157 1087 aaKnown RBP5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 CYB5RLQ6IPT4 315 aa5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 C1orf229Q6ZS94 237 aaPredicted RBP5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 CCER1Q8TC90 406 aaPredicted RBP5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 FHDC1Q9C0D6 1143 aaPredicted RBP5.88□□□□□ -1.47
IGHV3-29-201ENST00000604817 FGFR3P22607 806 aa5.87□□□□□ -1.47
IGHV3-29-201ENST00000604817 MSX1P28360 303 aa5.87□□□□□ -1.47
IGHV3-29-201ENST00000604817 NCOA4Q13772 614 aa5.87□□□□□ -1.47
IGHV3-29-201ENST00000604817 GRIN2CQ14957 1233 aa5.87□□□□□ -1.47
IGHV3-29-201ENST00000604817 C4orf17Q53FE4 359 aa5.87□□□□□ -1.47
IGHV3-29-201ENST00000604817 FIGNL1Q6PIW4 674 aa5.87□□□□□ -1.47
IGHV3-29-201ENST00000604817 LARP1Q6PKG0 1096 aaKnown RBP5.87□□□□□ -1.47
IGHV3-29-201ENST00000604817 CRISPLD1Q9H336 500 aa5.87□□□□□ -1.47
IGHV3-29-201ENST00000604817 MKRN1Q9UHC7 482 aaKnown RBP5.87□□□□□ -1.47
IGHV3-29-201ENST00000604817 DOLKQ9UPQ8 538 aa5.87□□□□□ -1.47
IGHV3-29-201ENST00000604817 NOD1Q9Y239 953 aa5.87□□□□□ -1.47
IGHV3-29-201ENST00000604817 FURINP09958 794 aa5.86□□□□□ -1.47
IGHV3-29-201ENST00000604817 ARAFP10398 606 aa5.86□□□□□ -1.47
IGHV3-29-201ENST00000604817 TCF3P15923 654 aa5.86□□□□□ -1.47
IGHV3-29-201ENST00000604817 LINC00114Q6XXX2 140 aa5.86□□□□□ -1.47
IGHV3-29-201ENST00000604817 Q8N3U1 123 aa5.86□□□□□ -1.47
IGHV3-29-201ENST00000604817 RHBDD1Q8TEB9 315 aa5.86□□□□□ -1.47
IGHV3-29-201ENST00000604817 DRC1Q96MC2 740 aa5.86□□□□□ -1.47
IGHV3-29-201ENST00000604817 C8orf37Q96NL8 207 aa5.86□□□□□ -1.47
IGHV3-29-201ENST00000604817 RUBCNLQ9H714 662 aa5.86□□□□□ -1.47
IGHV3-29-201ENST00000604817 NDFIP2Q9NV92 336 aa5.86□□□□□ -1.47
IGHV3-29-201ENST00000604817 GGA1Q9UJY5 639 aa5.86□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L15C9J2P7 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L10C9JJH3 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L13C9JLJ4 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L12C9JPN9 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L11C9JVI0 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L21D6R901 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L18D6R9N7 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L22D6RA61 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L17D6RBQ6 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L19D6RCP7 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L20D6RJB6 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 EPXP11678 715 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 RASA1P20936 1047 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP17L24Q0WX57 530 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 USP4Q13107 963 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 TMEM164Q5U3C3 297 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 PPARGC1BQ86YN6 1023 aaKnown RBP5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 C1orf216Q8TAB5 229 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 ABHD17AQ96GS6 310 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 BTBD6Q96KE9 485 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 ZMIZ1Q9ULJ6 1067 aa5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 NOVA2Q9UNW9 492 aaKnown RBP5.85□□□□□ -1.47
IGHV3-29-201ENST00000604817 BNIP3LO60238 219 aa5.84□□□□□ -1.47
IGHV3-29-201ENST00000604817 HOXB4P17483 251 aaPredicted RBP5.84□□□□□ -1.47
IGHV3-29-201ENST00000604817 CANXP27824 592 aaKnown RBP5.84□□□□□ -1.47
IGHV3-29-201ENST00000604817 PTK7Q13308 1070 aa5.84□□□□□ -1.47
IGHV3-29-201ENST00000604817 SWI5Q1ZZU3 235 aa5.84□□□□□ -1.47
IGHV3-29-201ENST00000604817 NLRP8Q86W28 1048 aa5.84□□□□□ -1.47
IGHV3-29-201ENST00000604817 LARGE2Q8N3Y3 721 aa5.84□□□□□ -1.47
IGHV3-29-201ENST00000604817 SREK1Q8WXA9 508 aaKnown RBP5.84□□□□□ -1.47
IGHV3-29-201ENST00000604817 CDCA7Q9BWT1 371 aaPredicted RBP5.84□□□□□ -1.47
IGHV3-29-201ENST00000604817 BCL2L13Q9BXK5 485 aa5.84□□□□□ -1.47
IGHV3-29-201ENST00000604817 RBM19Q9Y4C8 960 aaKnown RBP5.84□□□□□ -1.47
IGHV3-29-201ENST00000604817 CEP164Q9UPV0 1460 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 C1QTNF9BB2RNN3 333 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 C2CD2LO14523 706 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 ARID4AP29374 1257 aaPredicted RBP5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 DGKGP49619 791 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 CTBSQ01459 385 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 TLR1Q15399 786 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 DEPDC4Q8N2C3 294 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 OGFOD1Q8N543 542 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 FAM200AQ8TCP9 573 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 STK32AQ8WU08 396 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 CCDC85AQ96PX6 553 aaPredicted RBP5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 SUV39H2Q9H5I1 410 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 AVENQ9NQS1 362 aaPredicted RBP5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 PCDHGC4Q9Y5F7 938 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 ARHGEF11O15085 1522 aa5.83□□□□□ -1.48
IGHV3-29-201ENST00000604817 SOWAHDA6NJG2 315 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms