RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 CFAP70Q5T0N1 1121 aa4.04□□□□□ -1.76
VCAM1-205ENST00000603679 EFCAB3Q8N7B9 438 aa4.04□□□□□ -1.76
VCAM1-205ENST00000603679 SAGE1Q9NXZ1 904 aa4.04□□□□□ -1.76
VCAM1-205ENST00000603679 OXER1Q8TDS5 423 aa4.04□□□□□ -1.76
VCAM1-205ENST00000603679 PKNOX2Q96KN3 472 aa4.04□□□□□ -1.76
VCAM1-205ENST00000603679 FLT4P35916 1363 aa4.04□□□□□ -1.76
VCAM1-205ENST00000603679 IL2RBP14784 551 aa4.04□□□□□ -1.76
VCAM1-205ENST00000603679 CCDC27Q2M243 656 aa4.04□□□□□ -1.76
VCAM1-205ENST00000603679 PRM3Q9NNZ6 103 aa4.04□□□□□ -1.76
VCAM1-205ENST00000603679 PCDH11XQ9BZA7 1347 aa4.04□□□□□ -1.76
VCAM1-205ENST00000603679 PCDH11YQ9BZA8 1340 aa4.04□□□□□ -1.76
VCAM1-205ENST00000603679 TM4SF1P30408 202 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 TTLL12Q14166 644 aaPredicted RBP4.03□□□□□ -1.76
VCAM1-205ENST00000603679 TMEM259Q4ZIN3 620 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 SMARCC1Q92922 1105 aaPredicted RBP4.03□□□□□ -1.76
VCAM1-205ENST00000603679 ZNF428Q96B54 188 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 ATP1B4Q9UN42 357 aaPredicted RBP4.03□□□□□ -1.76
VCAM1-205ENST00000603679 HEG1Q9ULI3 1381 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 ERCC3P19447 782 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 GIGYF2Q6Y7W6 1299 aaKnown RBP4.03□□□□□ -1.76
VCAM1-205ENST00000603679 PRDM11Q9NQV5 511 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 KIF7Q2M1P5 1343 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 EVC2Q86UK5 1308 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 COL4A5P29400 1685 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 A0A0G2JMZ2 1700 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 PPP1R15BQ5SWA1 713 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 PBXIP1Q96AQ6 731 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 POM121Q96HA1 1249 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 TMUB1Q9BVT8 246 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 IGSF5Q9NSI5 407 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 PCDHB8Q9UN66 801 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 PCDHB13Q9Y5F0 798 aa4.03□□□□□ -1.76
VCAM1-205ENST00000603679 PSDA5PKW4 1024 aaPredicted RBP4.02□□□□□ -1.77
VCAM1-205ENST00000603679 CENPBP07199 599 aaPredicted RBP4.02□□□□□ -1.77
VCAM1-205ENST00000603679 MMP14P50281 582 aa4.02□□□□□ -1.77
VCAM1-205ENST00000603679 SND1Q7KZF4 910 aaKnown RBP eCLIP4.02□□□□□ -1.77
VCAM1-205ENST00000603679 REM2Q8IYK8 340 aaPredicted RBP4.02□□□□□ -1.77
VCAM1-205ENST00000603679 PER1O15534 1290 aaPredicted RBP4.02□□□□□ -1.77
VCAM1-205ENST00000603679 CSB-PGBD3P0DP91 1061 aa4.02□□□□□ -1.77
VCAM1-205ENST00000603679 PDE3BQ13370 1112 aa4.02□□□□□ -1.77
VCAM1-205ENST00000603679 RBM47A0AV96 593 aaKnown RBP4.02□□□□□ -1.77
VCAM1-205ENST00000603679 POTECB2RU33 542 aa4.02□□□□□ -1.77
VCAM1-205ENST00000603679 MS4A1P11836 297 aa4.02□□□□□ -1.77
VCAM1-205ENST00000603679 GPHNQ9NQX3 736 aaPredicted RBP4.02□□□□□ -1.77
VCAM1-205ENST00000603679 IGSF1Q8N6C5 1336 aa4.01□□□□□ -1.77
VCAM1-205ENST00000603679 ERVV-2B6SEH9 535 aa4.01□□□□□ -1.77
VCAM1-205ENST00000603679 TBC1D12O60347 775 aa4.01□□□□□ -1.77
VCAM1-205ENST00000603679 CLCN1P35523 988 aa4.01□□□□□ -1.77
VCAM1-205ENST00000603679 COL23A1Q86Y22 540 aaPredicted RBP4.01□□□□□ -1.77
VCAM1-205ENST00000603679 KTN1Q86UP2 1357 aaKnown RBP4.01□□□□□ -1.77
VCAM1-205ENST00000603679 PALLDQ8WX93 1383 aa4.01□□□□□ -1.77
VCAM1-205ENST00000603679 TNRC18O15417 2968 aaPredicted RBP4.01□□□□□ -1.77
VCAM1-205ENST00000603679 PLXNB2O15031 1838 aa4.01□□□□□ -1.77
VCAM1-205ENST00000603679 NUTM2FA1L443 756 aa4.01□□□□□ -1.77
VCAM1-205ENST00000603679 SMC1BQ8NDV3 1235 aa4.01□□□□□ -1.77
VCAM1-205ENST00000603679 WASHC2AQ641Q2 1341 aa4.01□□□□□ -1.77
VCAM1-205ENST00000603679 UNCXA6NJT0 531 aa4.01□□□□□ -1.77
VCAM1-205ENST00000603679 ZNF326Q5BKZ1 582 aaKnown RBP4.01□□□□□ -1.77
VCAM1-205ENST00000603679 COL4A6Q14031 1691 aa4□□□□□ -1.77
VCAM1-205ENST00000603679 POLD1P28340 1107 aa4□□□□□ -1.77
VCAM1-205ENST00000603679 CALR3Q96L12 384 aaKnown RBP4□□□□□ -1.77
VCAM1-205ENST00000603679 CABP2Q9NPB3 220 aa4□□□□□ -1.77
VCAM1-205ENST00000603679 DOCK2Q92608 1830 aa4□□□□□ -1.77
VCAM1-205ENST00000603679 RNF123Q5XPI4 1314 aa4□□□□□ -1.77
VCAM1-205ENST00000603679 EXOC5O00471 708 aa4□□□□□ -1.77
VCAM1-205ENST00000603679 DPYSL4O14531 572 aa4□□□□□ -1.77
VCAM1-205ENST00000603679 PPM1GO15355 546 aaPredicted RBP4□□□□□ -1.77
VCAM1-205ENST00000603679 CA12O43570 354 aa4□□□□□ -1.77
VCAM1-205ENST00000603679 GPR153Q6NV75 609 aa4□□□□□ -1.77
VCAM1-205ENST00000603679 WBP1LQ9NX94 342 aa4□□□□□ -1.77
VCAM1-205ENST00000603679 PTPRFP10586 1907 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 DIXDC1Q155Q3 683 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 B4GALNT3Q6L9W6 998 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 UBE2Q2Q8WVN8 375 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 C7orf43Q8WVR3 580 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 CHIC2Q9UKJ5 165 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 SENP3-EIF4A1A0A087X0R7 540 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 FAM177A1Q8N128 213 aaPredicted RBP3.99□□□□□ -1.77
VCAM1-205ENST00000603679 CABLES1Q8TDN4 633 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.99□□□□□ -1.77
VCAM1-205ENST00000603679 TUSC1Q2TAM9 212 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 RGL3Q3MIN7 710 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 PTF1AQ7RTS3 328 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 NLGN2Q8NFZ4 835 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 GNEQ9Y223 722 aaKnown RBP3.99□□□□□ -1.77
VCAM1-205ENST00000603679 KDM2BQ8NHM5 1336 aa3.99□□□□□ -1.77
VCAM1-205ENST00000603679 RPAP1Q9BWH6 1393 aaPredicted RBP3.98□□□□□ -1.77
VCAM1-205ENST00000603679 HOXC9P31274 260 aa3.98□□□□□ -1.77
VCAM1-205ENST00000603679 NAP1L5Q96NT1 182 aaPredicted RBP3.98□□□□□ -1.77
VCAM1-205ENST00000603679 PDGFDQ9GZP0 370 aaPredicted RBP3.98□□□□□ -1.77
VCAM1-205ENST00000603679 GPCPD1Q9NPB8 672 aa3.98□□□□□ -1.77
VCAM1-205ENST00000603679 MS4A4AQ96JQ5 239 aa3.98□□□□□ -1.77
VCAM1-205ENST00000603679 SOS1Q07889 1333 aaPredicted RBP3.98□□□□□ -1.77
VCAM1-205ENST00000603679 USP42Q9H9J4 1324 aaKnown RBP3.98□□□□□ -1.77
VCAM1-205ENST00000603679 PPP2R2DQ66LE6 453 aa3.98□□□□□ -1.77
VCAM1-205ENST00000603679 PRO3102Q9H379 93 aa3.98□□□□□ -1.77
VCAM1-205ENST00000603679 EMILIN3Q9NT22 766 aa3.98□□□□□ -1.77
VCAM1-205ENST00000603679 PARP14Q460N5 1801 aa3.98□□□□□ -1.77
VCAM1-205ENST00000603679 CDK5RAP2Q96SN8 1893 aa3.98□□□□□ -1.77
VCAM1-205ENST00000603679 TMEM132EQ6IEE7 984 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms