RNA–Protein interactions for RNA: ENST00000597928.5

USHBP1-207, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2

Gene USHBP1, Length 3,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-207ENST00000597928 A0A087WWV3 80 aa14.8□□□□□ -0.04
USHBP1-207ENST00000597928 A0A087WZG4 1122 aa14.8□□□□□ -0.04
USHBP1-207ENST00000597928 PLEKHG3A1L390 1219 aa14.8□□□□□ -0.04
USHBP1-207ENST00000597928 GCP02774 474 aa14.8□□□□□ -0.04
USHBP1-207ENST00000597928 TMEM2Q9UHN6 1383 aa14.8□□□□□ -0.04
USHBP1-207ENST00000597928 ATP2B1P20020 1258 aa14.79□□□□□ -0.04
USHBP1-207ENST00000597928 SEC62Q99442 399 aaKnown RBP14.79□□□□□ -0.04
USHBP1-207ENST00000597928 ARHGEF40Q8TER5 1519 aa14.79□□□□□ -0.04
USHBP1-207ENST00000597928 MAP3K5Q99683 1374 aa14.79□□□□□ -0.04
USHBP1-207ENST00000597928 NRXN1Q9ULB1 1477 aa14.79□□□□□ -0.04
USHBP1-207ENST00000597928 SUCLG2Q96I99 432 aa14.79□□□□□ -0.04
USHBP1-207ENST00000597928 RNF20Q5VTR2 975 aa14.79□□□□□ -0.04
USHBP1-207ENST00000597928 ISM2Q6H9L7 571 aa14.79□□□□□ -0.04
USHBP1-207ENST00000597928 ZBTB9Q96C00 473 aa14.79□□□□□ -0.04
USHBP1-207ENST00000597928 A2ML1A8K2U0 1454 aa14.79□□□□□ -0.04
USHBP1-207ENST00000597928 PTCH1Q13635 1447 aa14.78□□□□□ -0.04
USHBP1-207ENST00000597928 ZSCAN22P10073 491 aaPredicted RBP14.78□□□□□ -0.04
USHBP1-207ENST00000597928 BRPF1P55201 1214 aaPredicted RBP14.78□□□□□ -0.04
USHBP1-207ENST00000597928 CABP4P57796 275 aa14.78□□□□□ -0.04
USHBP1-207ENST00000597928 EIF4A1P60842 406 aaKnown RBP14.78□□□□□ -0.04
USHBP1-207ENST00000597928 GOLIM4O00461 696 aa14.78□□□□□ -0.04
USHBP1-207ENST00000597928 CHAF1AQ13111 956 aaPredicted RBP14.78□□□□□ -0.04
USHBP1-207ENST00000597928 FRMPD1Q5SYB0 1578 aa14.78□□□□□ -0.04
USHBP1-207ENST00000597928 CREBRFQ8IUR6 639 aa14.78□□□□□ -0.04
USHBP1-207ENST00000597928 SPATA32Q96LK8 384 aa14.78□□□□□ -0.04
USHBP1-207ENST00000597928 BECN2A8MW95 431 aa14.77□□□□□ -0.04
USHBP1-207ENST00000597928 MYO3AQ8NEV4 1616 aa14.77□□□□□ -0.05
USHBP1-207ENST00000597928 SGSM2O43147 1006 aa14.77□□□□□ -0.05
USHBP1-207ENST00000597928 TIMM10P62072 90 aa14.77□□□□□ -0.05
USHBP1-207ENST00000597928 RUFY3Q7L099 469 aa14.77□□□□□ -0.05
USHBP1-207ENST00000597928 KRT28Q7Z3Y7 464 aa14.77□□□□□ -0.05
USHBP1-207ENST00000597928 ISY1Q9ULR0 285 aaKnown RBP14.77□□□□□ -0.05
USHBP1-207ENST00000597928 GRM8O00222 908 aa14.77□□□□□ -0.05
USHBP1-207ENST00000597928 TATP17735 454 aaPredicted RBP14.77□□□□□ -0.05
USHBP1-207ENST00000597928 TNMDQ9H2S6 317 aa14.77□□□□□ -0.05
USHBP1-207ENST00000597928 ATF3P18847 181 aa14.76□□□□□ -0.05
USHBP1-207ENST00000597928 EVA1CP58658 441 aa14.76□□□□□ -0.05
USHBP1-207ENST00000597928 NCBP3Q53F19 620 aaKnown RBP14.76□□□□□ -0.05
USHBP1-207ENST00000597928 FILIP1Q7Z7B0 1213 aa14.76□□□□□ -0.05
USHBP1-207ENST00000597928 EAF2Q96CJ1 260 aaPredicted RBP14.76□□□□□ -0.05
USHBP1-207ENST00000597928 PIK3C2BO00750 1634 aa14.76□□□□□ -0.05
USHBP1-207ENST00000597928 NEO1Q92859 1461 aa14.76□□□□□ -0.05
USHBP1-207ENST00000597928 SHPRHQ149N8 1683 aa14.76□□□□□ -0.05
USHBP1-207ENST00000597928 SASS6Q6UVJ0 657 aa14.76□□□□□ -0.05
USHBP1-207ENST00000597928 CCDC82Q8N4S0 544 aa14.76□□□□□ -0.05
USHBP1-207ENST00000597928 SBNO1A3KN83 1393 aa14.76□□□□□ -0.05
USHBP1-207ENST00000597928 BRF1Q92994 677 aa14.75□□□□□ -0.05
USHBP1-207ENST00000597928 ZNF594Q96JF6 807 aaPredicted RBP14.75□□□□□ -0.05
USHBP1-207ENST00000597928 GOLGA6L19H0YKK7 550 aa14.75□□□□□ -0.05
USHBP1-207ENST00000597928 BRD1O95696 1058 aa14.75□□□□□ -0.05
USHBP1-207ENST00000597928 KRT85P78386 507 aa14.75□□□□□ -0.05
USHBP1-207ENST00000597928 TOM1L2Q6ZVM7 507 aa14.75□□□□□ -0.05
USHBP1-207ENST00000597928 USP16Q9Y5T5 823 aa14.75□□□□□ -0.05
USHBP1-207ENST00000597928 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.75□□□□□ -0.05
USHBP1-207ENST00000597928 SETBP1Q9Y6X0 1596 aa14.75□□□□□ -0.05
USHBP1-207ENST00000597928 TTC21AQ8NDW8 1320 aa14.75□□□□□ -0.05
USHBP1-207ENST00000597928 VWDEQ8N2E2 1590 aa14.75□□□□□ -0.05
USHBP1-207ENST00000597928 JAK2O60674 1132 aa14.75□□□□□ -0.05
USHBP1-207ENST00000597928 GPTP24298 496 aa14.75□□□□□ -0.05
USHBP1-207ENST00000597928 COL3A1P02461 1466 aaPredicted RBP14.75□□□□□ -0.05
USHBP1-207ENST00000597928 TFCP2Q12800 502 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 RNMTO43148 476 aaKnown RBP14.74□□□□□ -0.05
USHBP1-207ENST00000597928 F13A1P00488 732 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 CREB3L3Q68CJ9 461 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 LMBR1LQ6UX01 489 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 KSR2Q6VAB6 950 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 CCDC144CPQ8IYA2 1237 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 A0A0D9SFI3 127 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 ME3Q16798 604 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 CCDC183Q5T5S1 534 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 BEND3Q5T5X7 828 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 LUZP1Q86V48 1076 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 USP6P35125 1406 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 ARAP3Q8WWN8 1544 aa14.74□□□□□ -0.05
USHBP1-207ENST00000597928 PSMA5P28066 241 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 ME1P48163 572 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 CSPP1Q1MSJ5 1256 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 AATKQ6ZMQ8 1374 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 SSH3Q8TE77 659 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 SDF4Q9BRK5 362 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 ZMYND15Q9H091 742 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 DACT1Q9NYF0 836 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 DDIT3P35638 169 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 PKNOX2Q96KN3 472 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 NUP62CLQ9H1M0 184 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 NCOA5Q9HCD5 579 aaKnown RBP14.73□□□□□ -0.05
USHBP1-207ENST00000597928 IBTKQ9P2D0 1353 aaPredicted RBP14.73□□□□□ -0.05
USHBP1-207ENST00000597928 BIN1O00499 593 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 HSPA4P34932 840 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 OTUD7BQ6GQQ9 843 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 ANKRD13DQ6ZTN6 518 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 CDC37L1Q7L3B6 337 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 IP6K1Q92551 441 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 DBNDD2Q9BQY9 259 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 HDAC5Q9UQL6 1122 aa14.73□□□□□ -0.05
USHBP1-207ENST00000597928 KIAA0232Q92628 1395 aa14.72□□□□□ -0.05
USHBP1-207ENST00000597928 CPLX1O14810 134 aa14.72□□□□□ -0.05
USHBP1-207ENST00000597928 IGSF3O75054 1194 aa14.72□□□□□ -0.05
USHBP1-207ENST00000597928 POLR3DP05423 398 aaPredicted RBP14.72□□□□□ -0.05
USHBP1-207ENST00000597928 LARP1Q6PKG0 1096 aaKnown RBP14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms