RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 TBC1D9BQ66K14 1250 aa17.26■□□□□ 0.35
RPAIN-216ENST00000575599 NECTIN2Q92692 538 aa17.26■□□□□ 0.35
RPAIN-216ENST00000575599 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
RPAIN-216ENST00000575599 IFT57Q9NWB7 429 aa17.26■□□□□ 0.35
RPAIN-216ENST00000575599 AFDNP55196 1824 aaKnown RBP17.25■□□□□ 0.35
RPAIN-216ENST00000575599 PXDNLA1KZ92 1463 aa17.25■□□□□ 0.35
RPAIN-216ENST00000575599 UTRNP46939 3433 aa17.25■□□□□ 0.35
RPAIN-216ENST00000575599 GNAI1P63096 354 aa17.25■□□□□ 0.35
RPAIN-216ENST00000575599 SALL2Q9Y467 1007 aaPredicted RBP17.25■□□□□ 0.35
RPAIN-216ENST00000575599 N4BP2Q86UW6 1770 aaPredicted RBP17.24■□□□□ 0.35
RPAIN-216ENST00000575599 REM2Q8IYK8 340 aaPredicted RBP17.24■□□□□ 0.35
RPAIN-216ENST00000575599 GOLGB1Q14789 3259 aaKnown RBP17.24■□□□□ 0.35
RPAIN-216ENST00000575599 KIAA1551Q9HCM1 1747 aa17.24■□□□□ 0.35
RPAIN-216ENST00000575599 NRXN2Q9P2S2 1712 aa17.23■□□□□ 0.35
RPAIN-216ENST00000575599 ERBB4Q15303 1308 aa17.23■□□□□ 0.35
RPAIN-216ENST00000575599 SERPINB2P05120 415 aa17.23■□□□□ 0.35
RPAIN-216ENST00000575599 ZNF853P0CG23 659 aa17.23■□□□□ 0.35
RPAIN-216ENST00000575599 YBX3P16989 372 aaKnown RBP eCLIP17.23■□□□□ 0.351e-7■□□□□ 10.3
RPAIN-216ENST00000575599 ZNF652Q9Y2D9 606 aa17.23■□□□□ 0.35
RPAIN-216ENST00000575599 CARMIL3Q8ND23 1372 aa17.22■□□□□ 0.35
RPAIN-216ENST00000575599 ANXA1P04083 346 aa17.22■□□□□ 0.35
RPAIN-216ENST00000575599 TGFB2P61812 414 aa17.22■□□□□ 0.35
RPAIN-216ENST00000575599 CCDC27Q2M243 656 aa17.22■□□□□ 0.35
RPAIN-216ENST00000575599 KIF6Q6ZMV9 814 aa17.22■□□□□ 0.35
RPAIN-216ENST00000575599 WWC1Q8IX03 1113 aa17.22■□□□□ 0.35
RPAIN-216ENST00000575599 A0A0G2JLW4 131 aa17.21■□□□□ 0.35
RPAIN-216ENST00000575599 DPEP1P16444 411 aa17.21■□□□□ 0.35
RPAIN-216ENST00000575599 PROSER3Q2NL68 480 aa17.21■□□□□ 0.35
RPAIN-216ENST00000575599 TTLL7Q6ZT98 887 aa17.21■□□□□ 0.35
RPAIN-216ENST00000575599 SETDB2Q96T68 719 aa17.21■□□□□ 0.35
RPAIN-216ENST00000575599 NPHP1O15259 732 aa17.2■□□□□ 0.34
RPAIN-216ENST00000575599 HDGFL1Q5TGJ6 251 aa17.2■□□□□ 0.34
RPAIN-216ENST00000575599 DUSP27Q5VZP5 1158 aa17.2■□□□□ 0.34
RPAIN-216ENST00000575599 CLEC4GQ6UXB4 293 aa17.2■□□□□ 0.34
RPAIN-216ENST00000575599 CCER2I3L3R5 266 aa17.19■□□□□ 0.34
RPAIN-216ENST00000575599 HOXB7P09629 217 aa17.19■□□□□ 0.34
RPAIN-216ENST00000575599 PDIA6Q15084 440 aa17.19■□□□□ 0.34
RPAIN-216ENST00000575599 HLFQ16534 295 aa17.19■□□□□ 0.34
RPAIN-216ENST00000575599 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
RPAIN-216ENST00000575599 ZBTB3Q9H5J0 574 aa17.19■□□□□ 0.34
RPAIN-216ENST00000575599 MAP3K15Q6ZN16 1313 aa17.19■□□□□ 0.34
RPAIN-216ENST00000575599 ELL2O00472 640 aaPredicted RBP17.18■□□□□ 0.34
RPAIN-216ENST00000575599 CHRNA5P30532 468 aa17.18■□□□□ 0.34
RPAIN-216ENST00000575599 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
RPAIN-216ENST00000575599 CHPF2Q9P2E5 772 aa17.18■□□□□ 0.34
RPAIN-216ENST00000575599 NIP7Q9Y221 180 aaKnown RBP eCLIP17.18■□□□□ 0.34
RPAIN-216ENST00000575599 PRR5LQ6MZQ0 368 aa17.17■□□□□ 0.34
RPAIN-216ENST00000575599 LRP10Q7Z4F1 713 aa17.17■□□□□ 0.34
RPAIN-216ENST00000575599 CNBD1Q8NA66 436 aa17.17■□□□□ 0.34
RPAIN-216ENST00000575599 FAM177BA6PVY3 158 aa17.16■□□□□ 0.34
RPAIN-216ENST00000575599 ERVV-1B6SEH8 477 aa17.16■□□□□ 0.34
RPAIN-216ENST00000575599 RGL2O15211 777 aa17.16■□□□□ 0.34
RPAIN-216ENST00000575599 GRIN3BO60391 1043 aa17.16■□□□□ 0.34
RPAIN-216ENST00000575599 YY1P25490 414 aa17.16■□□□□ 0.34
RPAIN-216ENST00000575599 AIMP1Q12904 312 aaKnown RBP17.16■□□□□ 0.34
RPAIN-216ENST00000575599 NBPF5PQ86XG9 351 aaPredicted RBP17.16■□□□□ 0.34
RPAIN-216ENST00000575599 DDX21Q9NR30 783 aaKnown RBP eCLIP17.16■□□□□ 0.34
RPAIN-216ENST00000575599 BCS1LQ9Y276 419 aa17.16■□□□□ 0.34
RPAIN-216ENST00000575599 BRCA1P38398 1863 aaKnown RBP17.16■□□□□ 0.34
RPAIN-216ENST00000575599 NUP98P52948 1817 aa17.16■□□□□ 0.34
RPAIN-216ENST00000575599 ST5P78524 1137 aa17.15■□□□□ 0.34
RPAIN-216ENST00000575599 C8orf58Q8NAV2 365 aa17.15■□□□□ 0.34
RPAIN-216ENST00000575599 XAGE3Q8WTP9 111 aa17.15■□□□□ 0.34
RPAIN-216ENST00000575599 ANKRD31Q8N7Z5 1873 aa17.15■□□□□ 0.34
RPAIN-216ENST00000575599 IL16Q14005 1332 aa17.15■□□□□ 0.34
RPAIN-216ENST00000575599 CHD4Q14839 1912 aa17.15■□□□□ 0.34
RPAIN-216ENST00000575599 KCNA3P22001 575 aa17.15■□□□□ 0.34
RPAIN-216ENST00000575599 COPS6Q7L5N1 327 aa17.15■□□□□ 0.34
RPAIN-216ENST00000575599 PIM2Q9P1W9 311 aa17.15■□□□□ 0.34
RPAIN-216ENST00000575599 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
RPAIN-216ENST00000575599 ATP10DQ9P241 1426 aa17.14■□□□□ 0.33
RPAIN-216ENST00000575599 GPTP24298 496 aa17.14■□□□□ 0.33
RPAIN-216ENST00000575599 C2CD5Q86YS7 1000 aa17.14■□□□□ 0.33
RPAIN-216ENST00000575599 FXR2P51116 673 aaKnown RBP eCLIP17.13■□□□□ 0.33
RPAIN-216ENST00000575599 WDR63Q8IWG1 891 aa17.13■□□□□ 0.33
RPAIN-216ENST00000575599 TSPYL6Q8N831 410 aa17.13■□□□□ 0.33
RPAIN-216ENST00000575599 DLEC1Q9Y238 1755 aa17.12■□□□□ 0.33
RPAIN-216ENST00000575599 FANCIQ9NVI1 1328 aa17.12■□□□□ 0.33
RPAIN-216ENST00000575599 COL11A2P13942 1736 aaPredicted RBP17.12■□□□□ 0.33
RPAIN-216ENST00000575599 DALRD3Q5D0E6 543 aaKnown RBP17.12■□□□□ 0.33
RPAIN-216ENST00000575599 GIGYF2Q6Y7W6 1299 aaKnown RBP17.12■□□□□ 0.33
RPAIN-216ENST00000575599 BRIP1Q9BX63 1249 aa17.12■□□□□ 0.33
RPAIN-216ENST00000575599 H0YIN7 160 aa17.11■□□□□ 0.33
RPAIN-216ENST00000575599 GTF2E1P29083 439 aaPredicted RBP17.11■□□□□ 0.33
RPAIN-216ENST00000575599 PDE6BP35913 854 aa17.11■□□□□ 0.33
RPAIN-216ENST00000575599 TPTE2Q6XPS3 522 aa17.11■□□□□ 0.33
RPAIN-216ENST00000575599 HYPKQ9NX55 129 aa17.11■□□□□ 0.33
RPAIN-216ENST00000575599 UBN2Q6ZU65 1347 aa17.11■□□□□ 0.33
RPAIN-216ENST00000575599 ZBTB12Q9Y330 459 aaPredicted RBP17.1■□□□□ 0.33
RPAIN-216ENST00000575599 ANKRD36CQ5JPF3 1778 aa17.1■□□□□ 0.33
RPAIN-216ENST00000575599 ARFGEF1Q9Y6D6 1849 aa17.1■□□□□ 0.33
RPAIN-216ENST00000575599 TWISTNBQ3B726 338 aaPredicted RBP17.09■□□□□ 0.33
RPAIN-216ENST00000575599 CCDC30Q5VVM6 783 aa17.09■□□□□ 0.33
RPAIN-216ENST00000575599 NUTM1Q86Y26 1132 aa17.09■□□□□ 0.33
RPAIN-216ENST00000575599 ZNF34Q8IZ26 560 aa17.09■□□□□ 0.33
RPAIN-216ENST00000575599 ZNF622Q969S3 477 aaKnown RBP eCLIP17.09■□□□□ 0.33
RPAIN-216ENST00000575599 NYXQ9GZU5 481 aa17.09■□□□□ 0.33
RPAIN-216ENST00000575599 TCERG1O14776 1098 aaKnown RBP17.08■□□□□ 0.32
RPAIN-216ENST00000575599 HSP90AB3PQ58FF7 597 aa17.08■□□□□ 0.32
RPAIN-216ENST00000575599 SUSD4Q5VX71 490 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms