RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 ZNF394Q53GI3 561 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 PLEKHG4Q58EX7 1191 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 ZC3H12AQ5D1E8 599 aaKnown RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 RELL1Q8IUW5 271 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 NELL1Q92832 810 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 CCDC47Q96A33 483 aaKnown RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 MRFAP1L1Q96HT8 127 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 CD248Q9HCU0 757 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 ABCF2Q9UG63 623 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 IP6K2Q9UHH9 426 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 IPO8O15397 1037 aaKnown RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 TSPAN6O43657 245 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 AP1G2O75843 785 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 RAPGEF3O95398 923 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 KRT18P05783 430 aaKnown RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 SEC13P55735 322 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 HSP90AA2PQ14568 343 aaPredicted RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 NGEFQ8N5V2 710 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 RNF34Q969K3 372 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 DNAJC25Q9H1X3 360 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 SCUBE2Q9NQ36 999 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 POLG2Q9UHN1 485 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 TAGLN3Q9UI15 199 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 SUPT16HQ9Y5B9 1047 aaKnown RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 FANCD2Q9BXW9 1451 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 PPP1R12AO14974 1030 aaPredicted RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 PRIM1P49642 420 aaKnown RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 ATN1P54259 1190 aaPredicted RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 NFE2Q16621 373 aaPredicted RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 ERAP2Q6P179 960 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 GAS2L2Q8NHY3 880 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 CERKQ8TCT0 537 aa5.85□□□□□ -1.47
SMG1-207ENST00000563235 HMX1Q9NP08 348 aaPredicted RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 FAM217BQ9NTX9 383 aaPredicted RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 EVLQ9UI08 416 aaPredicted RBP5.85□□□□□ -1.47
SMG1-207ENST00000563235 URB2Q14146 1524 aaKnown RBP5.84□□□□□ -1.47
SMG1-207ENST00000563235 SPDYE16A6NNV3 312 aaPredicted RBP5.84□□□□□ -1.47
SMG1-207ENST00000563235 FCHSD2O94868 740 aa5.84□□□□□ -1.47
SMG1-207ENST00000563235 FGRP09769 529 aa5.84□□□□□ -1.47
SMG1-207ENST00000563235 HCLS1P14317 486 aaPredicted RBP5.84□□□□□ -1.47
SMG1-207ENST00000563235 OSBPP22059 807 aa5.84□□□□□ -1.47
SMG1-207ENST00000563235 RACK1P63244 317 aaKnown RBP5.84□□□□□ -1.47
SMG1-207ENST00000563235 E2F5Q15329 346 aa5.84□□□□□ -1.47
SMG1-207ENST00000563235 CRTC2Q53ET0 693 aaPredicted RBP5.84□□□□□ -1.47
SMG1-207ENST00000563235 BRDTQ58F21 947 aaPredicted RBP5.84□□□□□ -1.47
SMG1-207ENST00000563235 LMBRD2Q68DH5 695 aaPredicted RBP5.84□□□□□ -1.47
SMG1-207ENST00000563235 VGLL3A8MV65 326 aa5.84□□□□□ -1.48
SMG1-207ENST00000563235 hCG_1984214I3L0E3 225 aa5.84□□□□□ -1.48
SMG1-207ENST00000563235 KIF3BO15066 747 aa5.84□□□□□ -1.48
SMG1-207ENST00000563235 USP17L8P0C7I0 530 aa5.84□□□□□ -1.48
SMG1-207ENST00000563235 ATICP31939 592 aa5.84□□□□□ -1.48
SMG1-207ENST00000563235 WASHC5Q12768 1159 aa5.84□□□□□ -1.48
SMG1-207ENST00000563235 ALKBH2Q6NS38 261 aa5.84□□□□□ -1.48
SMG1-207ENST00000563235 KMT5AQ9NQR1 393 aa5.84□□□□□ -1.48
SMG1-207ENST00000563235 HOMER2Q9NSB8 354 aa5.84□□□□□ -1.48
SMG1-207ENST00000563235 BMP2KQ9NSY1 1161 aaPredicted RBP5.84□□□□□ -1.48
SMG1-207ENST00000563235 SMC3Q9UQE7 1217 aa5.84□□□□□ -1.48
SMG1-207ENST00000563235 INPP5FQ9Y2H2 1132 aa5.84□□□□□ -1.48
SMG1-207ENST00000563235 SYNJ1O43426 1573 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 SYNJ2O15056 1496 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 CCDC163A0A0D9SF12 145 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 LILRB3O75022 631 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 CAND2O75155 1236 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 POTEJP0CG39 1038 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 SSR1P43307 286 aaKnown RBP5.83□□□□□ -1.48
SMG1-207ENST00000563235 NFX1Q12986 1120 aaKnown RBP5.83□□□□□ -1.48
SMG1-207ENST00000563235 PDE3BQ13370 1112 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 SERINC3Q13530 473 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 IER5LQ5T953 404 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 POTEGQ6S5H5 508 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 STK26Q9P289 416 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 KDM6BO15054 1643 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 RASA1P20936 1047 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 RGS3P49796 1198 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 FAM161AQ3B820 660 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 HELQQ8TDG4 1101 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 E2F7Q96AV8 911 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 PRM3Q9NNZ6 103 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 FANCLQ9NW38 375 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 WDR97A6NE52 1622 aa5.83□□□□□ -1.48
SMG1-207ENST00000563235 MAP3K7O43318 606 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 U2AF1L5P0DN76 240 aaPredicted RBP5.82□□□□□ -1.48
SMG1-207ENST00000563235 ATP2B4P23634 1241 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 U2AF1Q01081 240 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMG1-207ENST00000563235 CALD1Q05682 793 aaKnown RBP5.82□□□□□ -1.48
SMG1-207ENST00000563235 MTMR3Q13615 1198 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 GNL2Q13823 731 aaKnown RBP5.82□□□□□ -1.48
SMG1-207ENST00000563235 ZKSCAN8Q15776 578 aaPredicted RBP5.82□□□□□ -1.48
SMG1-207ENST00000563235 GRAMD1BQ3KR37 738 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 ACBD5Q5T8D3 534 aaPredicted RBP5.82□□□□□ -1.48
SMG1-207ENST00000563235 ZNF710Q8N1W2 664 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 PPP2R3BQ9Y5P8 575 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 DISP3Q9P2K9 1392 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 LZTS3O60299 673 aaPredicted RBP5.82□□□□□ -1.48
SMG1-207ENST00000563235 SCGB1D2O95969 90 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 NOS2P35228 1153 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 GEMIN4P57678 1058 aaKnown RBP5.82□□□□□ -1.48
SMG1-207ENST00000563235 PTGDRQ13258 359 aa5.82□□□□□ -1.48
SMG1-207ENST00000563235 SEPT2Q15019 361 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms