RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 TNS1Q9HBL0 1735 aaKnown RBP9.75□□□□□ -0.85
TRAF3-206ENST00000558880 ZBTB7CA1YPR0 619 aa9.74□□□□□ -0.85
TRAF3-206ENST00000558880 TRIM37O94972 964 aa9.74□□□□□ -0.85
TRAF3-206ENST00000558880 WDR17Q8IZU2 1322 aa9.74□□□□□ -0.85
TRAF3-206ENST00000558880 KDRP35968 1356 aa9.74□□□□□ -0.85
TRAF3-206ENST00000558880 NRAPQ86VF7 1730 aa9.73□□□□□ -0.85
TRAF3-206ENST00000558880 COL14A1Q05707 1796 aaKnown RBP9.73□□□□□ -0.85
TRAF3-206ENST00000558880 MAP2P11137 1827 aaKnown RBP9.73□□□□□ -0.85
TRAF3-206ENST00000558880 APBA3O96018 575 aa9.73□□□□□ -0.85
TRAF3-206ENST00000558880 OATP04181 439 aa9.73□□□□□ -0.85
TRAF3-206ENST00000558880 DNAJB2P25686 324 aa9.73□□□□□ -0.85
TRAF3-206ENST00000558880 C1QTNF8P60827 252 aa9.73□□□□□ -0.85
TRAF3-206ENST00000558880 METTL3Q86U44 580 aaKnown RBP9.73□□□□□ -0.85
TRAF3-206ENST00000558880 PXYLP1Q8TE99 480 aa9.73□□□□□ -0.85
TRAF3-206ENST00000558880 ZC3H15Q8WU90 426 aaKnown RBP9.73□□□□□ -0.85
TRAF3-206ENST00000558880 NWD2Q9ULI1 1742 aa9.73□□□□□ -0.85
TRAF3-206ENST00000558880 LTN1O94822 1766 aa9.73□□□□□ -0.85
TRAF3-206ENST00000558880 DISP2A7MBM2 1401 aa9.73□□□□□ -0.85
TRAF3-206ENST00000558880 FAM208AQ9UK61 1670 aaKnown RBP9.72□□□□□ -0.85
TRAF3-206ENST00000558880 DIAPH1O60610 1272 aaKnown RBP9.72□□□□□ -0.85
TRAF3-206ENST00000558880 USHBP1Q8N6Y0 703 aa9.72□□□□□ -0.85
TRAF3-206ENST00000558880 LTV1Q96GA3 475 aaPredicted RBP9.72□□□□□ -0.85
TRAF3-206ENST00000558880 CAMKK2Q96RR4 588 aa9.72□□□□□ -0.85
TRAF3-206ENST00000558880 PLEKHF1Q96S99 279 aa9.72□□□□□ -0.85
TRAF3-206ENST00000558880 RSPH6AQ9H0K4 717 aa9.72□□□□□ -0.85
TRAF3-206ENST00000558880 SPON1Q9HCB6 807 aa9.72□□□□□ -0.85
TRAF3-206ENST00000558880 MRS2Q9HD23 443 aa9.72□□□□□ -0.85
TRAF3-206ENST00000558880 ADAMTS8Q9UP79 889 aa9.72□□□□□ -0.85
TRAF3-206ENST00000558880 SPATA31A5Q5VU36 1347 aa9.72□□□□□ -0.85
TRAF3-206ENST00000558880 SPATA31A7Q8IWB4 1347 aa9.72□□□□□ -0.85
TRAF3-206ENST00000558880 PHOX2BQ99453 314 aa9.71□□□□□ -0.86
TRAF3-206ENST00000558880 CARD10Q9BWT7 1032 aa9.71□□□□□ -0.86
TRAF3-206ENST00000558880 TSR3Q9UJK0 312 aaKnown RBP9.71□□□□□ -0.86
TRAF3-206ENST00000558880 SPATA31A1Q5TZJ5 1347 aa9.71□□□□□ -0.86
TRAF3-206ENST00000558880 PPP4CP60510 307 aa9.7□□□□□ -0.86
TRAF3-206ENST00000558880 MAP2K5Q13163 448 aa9.7□□□□□ -0.86
TRAF3-206ENST00000558880 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
TRAF3-206ENST00000558880 TMEM134Q9H6X4 195 aa9.7□□□□□ -0.86
TRAF3-206ENST00000558880 STRN4Q9NRL3 753 aa9.7□□□□□ -0.86
TRAF3-206ENST00000558880 CRB1P82279 1406 aa9.7□□□□□ -0.86
TRAF3-206ENST00000558880 MEGF6O75095 1541 aa9.7□□□□□ -0.86
TRAF3-206ENST00000558880 RGPD5Q99666 1765 aa9.7□□□□□ -0.86
TRAF3-206ENST00000558880 KCNQ2O43526 872 aa9.69□□□□□ -0.86
TRAF3-206ENST00000558880 HMOX1P09601 288 aa9.69□□□□□ -0.86
TRAF3-206ENST00000558880 SULT6B1Q6IMI4 303 aa9.69□□□□□ -0.86
TRAF3-206ENST00000558880 KRI1Q8N9T8 703 aaKnown RBP9.69□□□□□ -0.86
TRAF3-206ENST00000558880 PHACTR3Q96KR7 559 aa9.69□□□□□ -0.86
TRAF3-206ENST00000558880 NUP188Q5SRE5 1749 aa9.68□□□□□ -0.86
TRAF3-206ENST00000558880 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.68□□□□□ -0.86
TRAF3-206ENST00000558880 IRF6O14896 467 aa9.68□□□□□ -0.86
TRAF3-206ENST00000558880 CCDC102AQ96A19 550 aa9.68□□□□□ -0.86
TRAF3-206ENST00000558880 U2AF1L5P0DN76 240 aaPredicted RBP9.67□□□□□ -0.86
TRAF3-206ENST00000558880 U2AF1Q01081 240 aaKnown RBP eCLIP9.67□□□□□ -0.86
TRAF3-206ENST00000558880 TOM1L2Q6ZVM7 507 aa9.67□□□□□ -0.86
TRAF3-206ENST00000558880 SLF2Q8IX21 1173 aa9.67□□□□□ -0.86
TRAF3-206ENST00000558880 CFAP53Q96M91 514 aa9.67□□□□□ -0.86
TRAF3-206ENST00000558880 NLRP2Q9NX02 1062 aa9.67□□□□□ -0.86
TRAF3-206ENST00000558880 RGPD2P0DJD1 1756 aa9.67□□□□□ -0.86
TRAF3-206ENST00000558880 RREB1Q92766 1687 aa9.67□□□□□ -0.86
TRAF3-206ENST00000558880 U2SURPO15042 1029 aaKnown RBP9.66□□□□□ -0.86
TRAF3-206ENST00000558880 ZMYND10O75800 440 aa9.66□□□□□ -0.86
TRAF3-206ENST00000558880 PRKAR2BP31323 418 aa9.66□□□□□ -0.86
TRAF3-206ENST00000558880 FAM196AQ6ZSG2 479 aa9.66□□□□□ -0.86
TRAF3-206ENST00000558880 BARGINQ6ZT62 677 aa9.66□□□□□ -0.86
TRAF3-206ENST00000558880 TCP11L2Q8N4U5 519 aa9.66□□□□□ -0.86
TRAF3-206ENST00000558880 OVOS2A0A0G2JMS6 1433 aa9.65□□□□□ -0.86
TRAF3-206ENST00000558880 CSB-PGBD3P0DP91 1061 aa9.65□□□□□ -0.86
TRAF3-206ENST00000558880 EVA1CP58658 441 aa9.65□□□□□ -0.86
TRAF3-206ENST00000558880 MTHFSDQ2M296 383 aaKnown RBP9.65□□□□□ -0.86
TRAF3-206ENST00000558880 CCDC146Q8IYE0 955 aa9.65□□□□□ -0.86
TRAF3-206ENST00000558880 USP35Q9P2H5 1018 aa9.65□□□□□ -0.86
TRAF3-206ENST00000558880 CHD4Q14839 1912 aa9.64□□□□□ -0.87
TRAF3-206ENST00000558880 CYP27B1O15528 508 aa9.64□□□□□ -0.87
TRAF3-206ENST00000558880 SLC4A3P48751 1232 aa9.64□□□□□ -0.87
TRAF3-206ENST00000558880 FAM9BQ8IZU0 186 aa9.64□□□□□ -0.87
TRAF3-206ENST00000558880 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
TRAF3-206ENST00000558880 THRAP3Q9Y2W1 955 aaKnown RBP9.64□□□□□ -0.87
TRAF3-206ENST00000558880 THSD7AQ9UPZ6 1657 aa9.64□□□□□ -0.87
TRAF3-206ENST00000558880 IL2RBP14784 551 aa9.63□□□□□ -0.87
TRAF3-206ENST00000558880 APLP1P51693 650 aa9.63□□□□□ -0.87
TRAF3-206ENST00000558880 PDE3BQ13370 1112 aa9.63□□□□□ -0.87
TRAF3-206ENST00000558880 PLA2G2EQ9NZK7 142 aa9.63□□□□□ -0.87
TRAF3-206ENST00000558880 PLEKHG2Q9H7P9 1386 aa9.63□□□□□ -0.87
TRAF3-206ENST00000558880 APAF1O14727 1248 aa9.62□□□□□ -0.87
TRAF3-206ENST00000558880 ZBTB7AO95365 584 aa9.62□□□□□ -0.87
TRAF3-206ENST00000558880 MDM2Q00987 491 aaPredicted RBP9.62□□□□□ -0.87
TRAF3-206ENST00000558880 RUNDC1Q96C34 613 aa9.62□□□□□ -0.87
TRAF3-206ENST00000558880 ZNF521Q96K83 1311 aa9.61□□□□□ -0.87
TRAF3-206ENST00000558880 DDX11L8A8MPP1 907 aa9.61□□□□□ -0.87
TRAF3-206ENST00000558880 GIGYF1O75420 1035 aaPredicted RBP9.61□□□□□ -0.87
TRAF3-206ENST00000558880 SLC10A3P09131 477 aa9.61□□□□□ -0.87
TRAF3-206ENST00000558880 TMPOP42166 694 aaKnown RBP9.61□□□□□ -0.87
TRAF3-206ENST00000558880 WDR43Q15061 677 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRAF3-206ENST00000558880 NYAP1Q6ZVC0 841 aa9.61□□□□□ -0.87
TRAF3-206ENST00000558880 MARCH10Q8NA82 808 aaPredicted RBP9.61□□□□□ -0.87
TRAF3-206ENST00000558880 SHANK3Q9BYB0 1731 aa9.6□□□□□ -0.87
TRAF3-206ENST00000558880 KDM6AO15550 1401 aaPredicted RBP9.6□□□□□ -0.87
TRAF3-206ENST00000558880 TNS2Q63HR2 1409 aa9.6□□□□□ -0.87
TRAF3-206ENST00000558880 PHKG2P15735 406 aa9.6□□□□□ -0.87
TRAF3-206ENST00000558880 IL17REQ8NFR9 667 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms