RNA–Protein interactions for RNA: ENST00000557718.5

FOXN3-218, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-218ENST00000557718 KDM4CQ9H3R0 1056 aa8.46□□□□□ -1.06
FOXN3-218ENST00000557718 NWD1Q149M9 1564 aa8.45□□□□□ -1.06
FOXN3-218ENST00000557718 UPP2O95045 317 aa8.45□□□□□ -1.06
FOXN3-218ENST00000557718 BMP2P12643 396 aa8.45□□□□□ -1.06
FOXN3-218ENST00000557718 SH3D19Q5HYK7 790 aa8.45□□□□□ -1.06
FOXN3-218ENST00000557718 PDXDC2PQ6P474 469 aa8.45□□□□□ -1.06
FOXN3-218ENST00000557718 FAM117AQ9C073 453 aa8.45□□□□□ -1.06
FOXN3-218ENST00000557718 C14orf93Q9H972 538 aaKnown RBP8.45□□□□□ -1.06
FOXN3-218ENST00000557718 EMILIN1Q9Y6C2 1016 aa8.45□□□□□ -1.06
FOXN3-218ENST00000557718 MYOM1P52179 1685 aa8.45□□□□□ -1.06
FOXN3-218ENST00000557718 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.45□□□□□ -1.06
FOXN3-218ENST00000557718 ROCK2O75116 1388 aaKnown RBP8.45□□□□□ -1.06
FOXN3-218ENST00000557718 PTPRUQ92729 1446 aa8.45□□□□□ -1.06
FOXN3-218ENST00000557718 RGPD8O14715 1765 aaPredicted RBP8.44□□□□□ -1.06
FOXN3-218ENST00000557718 LORP23490 312 aaPredicted RBP8.44□□□□□ -1.06
FOXN3-218ENST00000557718 CCDC116Q8IYX3 515 aa8.44□□□□□ -1.06
FOXN3-218ENST00000557718 THEMISQ8N1K5 641 aaPredicted RBP8.44□□□□□ -1.06
FOXN3-218ENST00000557718 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.44□□□□□ -1.06
FOXN3-218ENST00000557718 FKBPLQ9UIM3 349 aa8.44□□□□□ -1.06
FOXN3-218ENST00000557718 METP08581 1390 aa8.44□□□□□ -1.06
FOXN3-218ENST00000557718 USP47Q96K76 1375 aa8.44□□□□□ -1.06
FOXN3-218ENST00000557718 DLC1Q96QB1 1528 aa8.44□□□□□ -1.06
FOXN3-218ENST00000557718 NALCNQ8IZF0 1738 aa8.43□□□□□ -1.06
FOXN3-218ENST00000557718 HSPA2P54652 639 aa8.43□□□□□ -1.06
FOXN3-218ENST00000557718 PPP2R2DQ66LE6 453 aa8.43□□□□□ -1.06
FOXN3-218ENST00000557718 TXNDC2Q86VQ3 553 aa8.43□□□□□ -1.06
FOXN3-218ENST00000557718 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.43□□□□□ -1.06
FOXN3-218ENST00000557718 DDRGK1Q96HY6 314 aa8.43□□□□□ -1.06
FOXN3-218ENST00000557718 ARHGAP9Q9BRR9 750 aa8.43□□□□□ -1.06
FOXN3-218ENST00000557718 NPHP4O75161 1426 aaPredicted RBP8.43□□□□□ -1.06
FOXN3-218ENST00000557718 YTHDC2Q9H6S0 1430 aaKnown RBP8.43□□□□□ -1.06
FOXN3-218ENST00000557718 NR6A1Q15406 480 aa8.42□□□□□ -1.06
FOXN3-218ENST00000557718 TMEM132EQ6IEE7 984 aa8.42□□□□□ -1.06
FOXN3-218ENST00000557718 ZSCAN1Q8NBB4 408 aa8.42□□□□□ -1.06
FOXN3-218ENST00000557718 HIRIP3Q9BW71 556 aaPredicted RBP8.42□□□□□ -1.06
FOXN3-218ENST00000557718 TECPR2O15040 1411 aa8.42□□□□□ -1.06
FOXN3-218ENST00000557718 SOS2Q07890 1332 aaPredicted RBP8.41□□□□□ -1.06
FOXN3-218ENST00000557718 VSIG8P0DPA2 414 aa8.41□□□□□ -1.06
FOXN3-218ENST00000557718 HSPA5P11021 654 aaKnown RBP8.41□□□□□ -1.06
FOXN3-218ENST00000557718 PPP1R26Q5T8A7 1209 aaPredicted RBP8.41□□□□□ -1.06
FOXN3-218ENST00000557718 TSEN34Q9BSV6 310 aaKnown RBP8.41□□□□□ -1.06
FOXN3-218ENST00000557718 CARD11Q9BXL7 1154 aa8.41□□□□□ -1.06
FOXN3-218ENST00000557718 TULP4Q9NRJ4 1543 aa8.4□□□□□ -1.06
FOXN3-218ENST00000557718 LRPPRCP42704 1394 aaKnown RBP8.4□□□□□ -1.06
FOXN3-218ENST00000557718 ZC3H4Q9UPT8 1303 aaKnown RBP8.4□□□□□ -1.06
FOXN3-218ENST00000557718 FAM181BA6NEQ2 426 aa8.4□□□□□ -1.06
FOXN3-218ENST00000557718 ZBTB33Q86T24 672 aa8.4□□□□□ -1.06
FOXN3-218ENST00000557718 DNMT3LQ9UJW3 386 aa8.4□□□□□ -1.06
FOXN3-218ENST00000557718 USP32Q8NFA0 1604 aa8.4□□□□□ -1.07
FOXN3-218ENST00000557718 ADGRB2O60241 1585 aa8.39□□□□□ -1.07
FOXN3-218ENST00000557718 AP1G2O75843 785 aa8.39□□□□□ -1.07
FOXN3-218ENST00000557718 ANKLE2Q86XL3 938 aa8.39□□□□□ -1.07
FOXN3-218ENST00000557718 SLC10A4Q96EP9 437 aa8.39□□□□□ -1.07
FOXN3-218ENST00000557718 SLC26A8Q96RN1 970 aa8.39□□□□□ -1.07
FOXN3-218ENST00000557718 KCTD15Q96SI1 283 aaPredicted RBP8.39□□□□□ -1.07
FOXN3-218ENST00000557718 OCSTAMPQ9BR26 566 aa8.39□□□□□ -1.07
FOXN3-218ENST00000557718 PGPEP1Q9NXJ5 209 aa8.39□□□□□ -1.07
FOXN3-218ENST00000557718 CDV3Q9UKY7 258 aaKnown RBP8.39□□□□□ -1.07
FOXN3-218ENST00000557718 EID1Q9Y6B2 187 aa8.39□□□□□ -1.07
FOXN3-218ENST00000557718 TOPAZ1Q8N9V7 1692 aa8.39□□□□□ -1.07
FOXN3-218ENST00000557718 PLEKHH1Q9ULM0 1364 aa8.38□□□□□ -1.07
FOXN3-218ENST00000557718 FMN2Q9NZ56 1722 aa8.38□□□□□ -1.07
FOXN3-218ENST00000557718 PPFIA3O75145 1194 aa8.38□□□□□ -1.07
FOXN3-218ENST00000557718 CBLBQ13191 982 aa8.38□□□□□ -1.07
FOXN3-218ENST00000557718 TESK2Q96S53 571 aa8.38□□□□□ -1.07
FOXN3-218ENST00000557718 PTCH1Q13635 1447 aa8.37□□□□□ -1.07
FOXN3-218ENST00000557718 ABCC11Q96J66 1382 aa8.37□□□□□ -1.07
FOXN3-218ENST00000557718 ROBO2Q9HCK4 1378 aa8.37□□□□□ -1.07
FOXN3-218ENST00000557718 DISP3Q9P2K9 1392 aa8.37□□□□□ -1.07
FOXN3-218ENST00000557718 ST20-MTHFSA0A0A6YYL1 179 aa8.37□□□□□ -1.07
FOXN3-218ENST00000557718 EIF4G2P78344 907 aaKnown RBP eCLIP8.37□□□□□ -1.07
FOXN3-218ENST00000557718 PTK2Q05397 1052 aa8.37□□□□□ -1.07
FOXN3-218ENST00000557718 Q6ZVU0 165 aa8.37□□□□□ -1.07
FOXN3-218ENST00000557718 BCANQ96GW7 911 aa8.37□□□□□ -1.07
FOXN3-218ENST00000557718 TBX22Q9Y458 520 aa8.37□□□□□ -1.07
FOXN3-218ENST00000557718 AKAP12Q02952 1782 aa8.37□□□□□ -1.07
FOXN3-218ENST00000557718 PIK3R4Q99570 1358 aa8.36□□□□□ -1.07
FOXN3-218ENST00000557718 SBNO2Q9Y2G9 1366 aa8.36□□□□□ -1.07
FOXN3-218ENST00000557718 TTLL8A6PVC2 850 aa8.36□□□□□ -1.07
FOXN3-218ENST00000557718 EPS8L1Q8TE68 723 aa8.36□□□□□ -1.07
FOXN3-218ENST00000557718 TRAK1Q9UPV9 953 aa8.36□□□□□ -1.07
FOXN3-218ENST00000557718 GPSM3Q9Y4H4 160 aa8.36□□□□□ -1.07
FOXN3-218ENST00000557718 ITSN1Q15811 1721 aa8.36□□□□□ -1.07
FOXN3-218ENST00000557718 FAM135BQ49AJ0 1406 aa8.36□□□□□ -1.07
FOXN3-218ENST00000557718 DHX9Q08211 1270 aaKnown RBP8.35□□□□□ -1.07
FOXN3-218ENST00000557718 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.35□□□□□ -1.078e-7■■■□□ 14.6
FOXN3-218ENST00000557718 INTS6LQ5JSJ4 861 aaKnown RBP8.35□□□□□ -1.07
FOXN3-218ENST00000557718 ADAM32Q8TC27 787 aa8.35□□□□□ -1.07
FOXN3-218ENST00000557718 HMX1Q9NP08 348 aaPredicted RBP8.35□□□□□ -1.07
FOXN3-218ENST00000557718 STK26Q9P289 416 aa8.35□□□□□ -1.07
FOXN3-218ENST00000557718 EIF3AQ14152 1382 aaKnown RBP8.35□□□□□ -1.07
FOXN3-218ENST00000557718 CCDC7Q96M83 1385 aa8.35□□□□□ -1.07
FOXN3-218ENST00000557718 WASHC2AQ641Q2 1341 aa8.34□□□□□ -1.07
FOXN3-218ENST00000557718 NKTRP30414 1462 aaKnown RBP8.34□□□□□ -1.07
FOXN3-218ENST00000557718 SPINT1O43278 529 aa8.34□□□□□ -1.07
FOXN3-218ENST00000557718 USP17L8P0C7I0 530 aa8.34□□□□□ -1.07
FOXN3-218ENST00000557718 CDC42BPGQ6DT37 1551 aa8.34□□□□□ -1.07
FOXN3-218ENST00000557718 MON2Q7Z3U7 1717 aa8.34□□□□□ -1.07
FOXN3-218ENST00000557718 KIF7Q2M1P5 1343 aa8.33□□□□□ -1.08
FOXN3-218ENST00000557718 CENPJQ9HC77 1338 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms