RNA–Protein interactions for RNA: ENST00000554973.1

FCF1-207, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 3

Gene FCF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-207ENST00000554973 GJD3Q8N144 294 aa8.57□□□□□ -1.04
FCF1-207ENST00000554973 PPP1R12BO60237 982 aaPredicted RBP8.56□□□□□ -1.04
FCF1-207ENST00000554973 RAB11FIP3O75154 756 aa8.56□□□□□ -1.04
FCF1-207ENST00000554973 CTSHP09668 335 aa8.56□□□□□ -1.04
FCF1-207ENST00000554973 SCNN1DP51172 638 aa8.56□□□□□ -1.04
FCF1-207ENST00000554973 GDF10P55107 478 aa8.56□□□□□ -1.04
FCF1-207ENST00000554973 PTPROQ16827 1216 aa8.56□□□□□ -1.04
FCF1-207ENST00000554973 USP48Q86UV5 1035 aa8.56□□□□□ -1.04
FCF1-207ENST00000554973 MICAL1Q8TDZ2 1067 aa8.56□□□□□ -1.04
FCF1-207ENST00000554973 GPATCH3Q96I76 525 aa8.56□□□□□ -1.04
FCF1-207ENST00000554973 SLC4A9Q96Q91 983 aa8.56□□□□□ -1.04
FCF1-207ENST00000554973 C2orf49Q9BVC5 232 aaPredicted RBP8.56□□□□□ -1.04
FCF1-207ENST00000554973 BRINP2Q9C0B6 783 aa8.56□□□□□ -1.04
FCF1-207ENST00000554973 METTL14Q9HCE5 456 aaKnown RBP8.56□□□□□ -1.04
FCF1-207ENST00000554973 SRA1Q9HD15 236 aaKnown RBP8.56□□□□□ -1.04
FCF1-207ENST00000554973 HSD3B2P26439 372 aa8.55□□□□□ -1.04
FCF1-207ENST00000554973 SCTRP47872 440 aa8.55□□□□□ -1.04
FCF1-207ENST00000554973 TCEAL1Q15170 157 aa8.55□□□□□ -1.04
FCF1-207ENST00000554973 ZNF394Q53GI3 561 aa8.55□□□□□ -1.04
FCF1-207ENST00000554973 MCF2L2Q86YR7 1114 aa8.55□□□□□ -1.04
FCF1-207ENST00000554973 ZNF511Q8NB15 262 aa8.55□□□□□ -1.04
FCF1-207ENST00000554973 KCNB2Q92953 911 aa8.55□□□□□ -1.04
FCF1-207ENST00000554973 MYO19Q96H55 970 aa8.55□□□□□ -1.04
FCF1-207ENST00000554973 CFHR5Q9BXR6 569 aa8.55□□□□□ -1.04
FCF1-207ENST00000554973 hCG_2014768A0A024R1R8 64 aa8.54□□□□□ -1.04
FCF1-207ENST00000554973 INHAP05111 366 aa8.54□□□□□ -1.04
FCF1-207ENST00000554973 IBSPP21815 317 aaPredicted RBP8.54□□□□□ -1.04
FCF1-207ENST00000554973 BRD2P25440 801 aaKnown RBP8.54□□□□□ -1.04
FCF1-207ENST00000554973 MZF1P28698 734 aaPredicted RBP8.54□□□□□ -1.04
FCF1-207ENST00000554973 NFE2L2Q16236 605 aa8.54□□□□□ -1.04
FCF1-207ENST00000554973 TRIM52Q96A61 297 aa8.54□□□□□ -1.04
FCF1-207ENST00000554973 CSRNP1Q96S65 589 aa8.54□□□□□ -1.04
FCF1-207ENST00000554973 POLIQ9UNA4 740 aa8.54□□□□□ -1.04
FCF1-207ENST00000554973 ZBTB39O15060 712 aa8.53□□□□□ -1.04
FCF1-207ENST00000554973 FGRP09769 529 aa8.53□□□□□ -1.04
FCF1-207ENST00000554973 ERVK-9P63128 1117 aa8.53□□□□□ -1.04
FCF1-207ENST00000554973 HS2ST1Q7LGA3 356 aa8.53□□□□□ -1.04
FCF1-207ENST00000554973 KCTD15Q96SI1 283 aaPredicted RBP8.53□□□□□ -1.04
FCF1-207ENST00000554973 PKD2L1Q9P0L9 805 aa8.53□□□□□ -1.04
FCF1-207ENST00000554973 SPG7Q9UQ90 795 aa8.53□□□□□ -1.04
FCF1-207ENST00000554973 PCDHGB7Q9Y5F8 929 aa8.53□□□□□ -1.04
FCF1-207ENST00000554973 EIF4BP23588 611 aaKnown RBP8.52□□□□□ -1.05
FCF1-207ENST00000554973 GJA8P48165 433 aa8.52□□□□□ -1.05
FCF1-207ENST00000554973 FOXK2Q01167 660 aa8.52□□□□□ -1.05
FCF1-207ENST00000554973 BMS1Q14692 1282 aaKnown RBP8.52□□□□□ -1.05
FCF1-207ENST00000554973 LINC01559Q495D7 138 aa8.52□□□□□ -1.05
FCF1-207ENST00000554973 CC2D2BQ6DHV5 1058 aa8.52□□□□□ -1.05
FCF1-207ENST00000554973 JAZF1Q86VZ6 243 aa8.52□□□□□ -1.05
FCF1-207ENST00000554973 CERS3Q8IU89 383 aa8.52□□□□□ -1.05
FCF1-207ENST00000554973 CYP4X1Q8N118 509 aa8.52□□□□□ -1.05
FCF1-207ENST00000554973 QTRT2Q9H974 415 aaKnown RBP8.52□□□□□ -1.05
FCF1-207ENST00000554973 SERTAD1Q9UHV2 236 aa8.52□□□□□ -1.05
FCF1-207ENST00000554973 ERVH48-1M5A8F1 160 aa8.51□□□□□ -1.05
FCF1-207ENST00000554973 NEFLP07196 543 aa8.51□□□□□ -1.05
FCF1-207ENST00000554973 ATF4P18848 351 aaPredicted RBP8.51□□□□□ -1.05
FCF1-207ENST00000554973 RAB15P59190 212 aa8.51□□□□□ -1.05
FCF1-207ENST00000554973 ATCAYQ86WG3 371 aa8.51□□□□□ -1.05
FCF1-207ENST00000554973 ZCRB1Q8TBF4 217 aaKnown RBP8.51□□□□□ -1.05
FCF1-207ENST00000554973 MRFAP1L1Q96HT8 127 aa8.51□□□□□ -1.05
FCF1-207ENST00000554973 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.51□□□□□ -1.05
FCF1-207ENST00000554973 OSBPL3Q9H4L5 887 aa8.51□□□□□ -1.05
FCF1-207ENST00000554973 SCHIP1Q9P0W5 487 aaPredicted RBP8.51□□□□□ -1.05
FCF1-207ENST00000554973 LRFN2Q9ULH4 789 aa8.51□□□□□ -1.05
FCF1-207ENST00000554973 USP31Q70CQ4 1352 aa8.5□□□□□ -1.05
FCF1-207ENST00000554973 RNF187Q5TA31 235 aaPredicted RBP8.5□□□□□ -1.05
FCF1-207ENST00000554973 NBPF6Q5VWK0 638 aa8.5□□□□□ -1.05
FCF1-207ENST00000554973 SLC9A9Q8IVB4 645 aa8.5□□□□□ -1.05
FCF1-207ENST00000554973 NBPF4Q96M43 638 aa8.5□□□□□ -1.05
FCF1-207ENST00000554973 DNAJC25Q9H1X3 360 aa8.5□□□□□ -1.05
FCF1-207ENST00000554973 GGT7Q9UJ14 662 aa8.5□□□□□ -1.05
FCF1-207ENST00000554973 NOP58Q9Y2X3 529 aaKnown RBP8.5□□□□□ -1.05
FCF1-207ENST00000554973 EIF1AYO14602 144 aaKnown RBP8.49□□□□□ -1.05
FCF1-207ENST00000554973 GIPC1O14908 333 aa8.49□□□□□ -1.05
FCF1-207ENST00000554973 XRCC5P13010 732 aaKnown RBP8.49□□□□□ -1.05
FCF1-207ENST00000554973 ANAPC15P60006 121 aa8.49□□□□□ -1.05
FCF1-207ENST00000554973 PSMA6P60900 246 aaKnown RBP8.49□□□□□ -1.05
FCF1-207ENST00000554973 DNM1Q05193 864 aaKnown RBP8.49□□□□□ -1.05
FCF1-207ENST00000554973 DMGDHQ9UI17 866 aaKnown RBP8.49□□□□□ -1.05
FCF1-207ENST00000554973 A6NJY4 79 aa8.48□□□□□ -1.05
FCF1-207ENST00000554973 PDGFAP04085 211 aa8.48□□□□□ -1.05
FCF1-207ENST00000554973 PCSK2P16519 638 aa8.48□□□□□ -1.05
FCF1-207ENST00000554973 MTFR1Q15390 333 aa8.48□□□□□ -1.05
FCF1-207ENST00000554973 INTS6LQ5JSJ4 861 aaKnown RBP8.48□□□□□ -1.05
FCF1-207ENST00000554973 FAM26DQ5JW98 314 aa8.48□□□□□ -1.05
FCF1-207ENST00000554973 DHX37Q8IY37 1157 aaKnown RBP8.48□□□□□ -1.05
FCF1-207ENST00000554973 CKAP2LQ8IYA6 745 aa8.48□□□□□ -1.05
FCF1-207ENST00000554973 EDEM1Q92611 657 aa8.48□□□□□ -1.05
FCF1-207ENST00000554973 MKL1Q969V6 931 aa8.48□□□□□ -1.05
FCF1-207ENST00000554973 ETNK1Q9HBU6 452 aa8.48□□□□□ -1.05
FCF1-207ENST00000554973 CHMP3Q9Y3E7 222 aa8.48□□□□□ -1.05
FCF1-207ENST00000554973 MRPL42Q9Y6G3 142 aaKnown RBP8.48□□□□□ -1.05
FCF1-207ENST00000554973 TTC24A2A3L6 582 aaPredicted RBP8.47□□□□□ -1.05
FCF1-207ENST00000554973 STAU1O95793 577 aaKnown RBP8.47□□□□□ -1.05
FCF1-207ENST00000554973 TRIM32Q13049 653 aa8.47□□□□□ -1.05
FCF1-207ENST00000554973 POTEAQ6S8J7 498 aa8.47□□□□□ -1.05
FCF1-207ENST00000554973 AAASQ9NRG9 546 aa8.47□□□□□ -1.05
FCF1-207ENST00000554973 TOR4AQ9NXH8 423 aa8.47□□□□□ -1.05
FCF1-207ENST00000554973 MAP4K5Q9Y4K4 846 aa8.47□□□□□ -1.05
FCF1-207ENST00000554973 K7ELQ4 463 aaPredicted RBP8.46□□□□□ -1.06
FCF1-207ENST00000554973 GNRH1P01148 92 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms