RNA–Protein interactions for RNA: ENST00000553058.5

PPFIA2-228, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 5

Gene PPFIA2, Length 917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-228ENST00000553058 ERBINQ96RT1 1412 aa11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 TREHO43280 583 aa11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 GTF2F1P35269 517 aaKnown RBP eCLIP11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 FANCCQ00597 558 aa11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 PTPRNQ16849 979 aa11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 CCDC144BQ3MJ40 725 aa11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 DHX37Q8IY37 1157 aaKnown RBP11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 ADAM32Q8TC27 787 aa11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 GPKOWQ92917 476 aaPredicted RBP eCLIP11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 RNF34Q969K3 372 aa11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 ZBED2Q9BTP6 218 aa11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 MRS2Q9HD23 443 aa11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 METTL5Q9NRN9 209 aaKnown RBP11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 RRP7BPQ9NSQ0 103 aa11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 PARP2Q9UGN5 583 aa11.46□□□□□ -0.57
PPFIA2-228ENST00000553058 PTPN23Q9H3S7 1636 aa11.46□□□□□ -0.58
PPFIA2-228ENST00000553058 ARHGAP23Q9P227 1491 aa11.45□□□□□ -0.58
PPFIA2-228ENST00000553058 LTKP29376 864 aa11.45□□□□□ -0.58
PPFIA2-228ENST00000553058 PSME1Q06323 249 aa11.45□□□□□ -0.58
PPFIA2-228ENST00000553058 HELQQ8TDG4 1101 aa11.45□□□□□ -0.58
PPFIA2-228ENST00000553058 ARMC5Q96C12 935 aa11.45□□□□□ -0.58
PPFIA2-228ENST00000553058 DCBLD2Q96PD2 775 aa11.45□□□□□ -0.58
PPFIA2-228ENST00000553058 PURBQ96QR8 312 aaKnown RBP11.45□□□□□ -0.58
PPFIA2-228ENST00000553058 FAM13AO94988 1023 aa11.44□□□□□ -0.58
PPFIA2-228ENST00000553058 NPR3P17342 541 aa11.44□□□□□ -0.58
PPFIA2-228ENST00000553058 BLOC1S3Q6QNY0 202 aa11.44□□□□□ -0.58
PPFIA2-228ENST00000553058 SAMD7Q7Z3H4 446 aa11.44□□□□□ -0.58
PPFIA2-228ENST00000553058 ARMC2Q8NEN0 867 aa11.44□□□□□ -0.58
PPFIA2-228ENST00000553058 IQSEC3Q9UPP2 1182 aaPredicted RBP11.44□□□□□ -0.58
PPFIA2-228ENST00000553058 PCDHGA11Q9Y5H2 935 aa11.44□□□□□ -0.58
PPFIA2-228ENST00000553058 SBNO2Q9Y2G9 1366 aa11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 CROCC2H7BZ55 1655 aa11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 PRPF40AO75400 957 aaKnown RBP11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 LDHBP07195 334 aaKnown RBP11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 HSPA1LP34931 641 aa11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 ITGAEP38570 1179 aa11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 FGD1P98174 961 aa11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 TMC4Q7Z404 712 aa11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 DUSP9Q99956 384 aaKnown RBP11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 RABGEF1Q9UJ41 708 aa11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 SLIT1O75093 1534 aa11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 LMTK2Q8IWU2 1503 aa11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 CEP152O94986 1710 aa11.43□□□□□ -0.58
PPFIA2-228ENST00000553058 LRRC7Q96NW7 1537 aa11.42□□□□□ -0.58
PPFIA2-228ENST00000553058 SORBS3O60504 671 aa11.42□□□□□ -0.58
PPFIA2-228ENST00000553058 JUNDP17535 347 aa11.42□□□□□ -0.58
PPFIA2-228ENST00000553058 NAA30Q147X3 362 aaPredicted RBP11.42□□□□□ -0.58
PPFIA2-228ENST00000553058 FAM98CQ17RN3 349 aaKnown RBP11.42□□□□□ -0.58
PPFIA2-228ENST00000553058 COL26A1Q96A83 441 aa11.42□□□□□ -0.58
PPFIA2-228ENST00000553058 ACBD3Q9H3P7 528 aa11.42□□□□□ -0.58
PPFIA2-228ENST00000553058 STRCP1A6NGW2 1772 aa11.41□□□□□ -0.58
PPFIA2-228ENST00000553058 UBR1Q8IWV7 1749 aa11.41□□□□□ -0.58
PPFIA2-228ENST00000553058 IQGAP1P46940 1657 aa11.41□□□□□ -0.58
PPFIA2-228ENST00000553058 ADGRL2O95490 1459 aa11.41□□□□□ -0.58
PPFIA2-228ENST00000553058 SCAF11Q99590 1463 aaKnown RBP11.41□□□□□ -0.58
PPFIA2-228ENST00000553058 NDUFB5O43674 189 aa11.41□□□□□ -0.58
PPFIA2-228ENST00000553058 ACTN4O43707 911 aaKnown RBP11.41□□□□□ -0.58
PPFIA2-228ENST00000553058 RNF40O75150 1001 aa11.41□□□□□ -0.58
PPFIA2-228ENST00000553058 BRICD5Q6PL45 260 aa11.41□□□□□ -0.58
PPFIA2-228ENST00000553058 ARHGAP9Q9BRR9 750 aa11.41□□□□□ -0.58
PPFIA2-228ENST00000553058 RNF19AQ9NV58 838 aa11.41□□□□□ -0.58
PPFIA2-228ENST00000553058 MARCH6O60337 910 aa11.4□□□□□ -0.58
PPFIA2-228ENST00000553058 ZNF76P36508 570 aa11.4□□□□□ -0.58
PPFIA2-228ENST00000553058 GNL2Q13823 731 aaKnown RBP11.4□□□□□ -0.58
PPFIA2-228ENST00000553058 DSC3Q14574 896 aa11.4□□□□□ -0.58
PPFIA2-228ENST00000553058 NBPF14Q5TI25 921 aa11.4□□□□□ -0.58
PPFIA2-228ENST00000553058 SDE2Q6IQ49 451 aa11.4□□□□□ -0.58
PPFIA2-228ENST00000553058 TSEN2Q8NCE0 465 aaKnown RBP11.4□□□□□ -0.58
PPFIA2-228ENST00000553058 GMLQ99445 158 aa11.4□□□□□ -0.58
PPFIA2-228ENST00000553058 VTI1BQ9UEU0 232 aa11.4□□□□□ -0.58
PPFIA2-228ENST00000553058 NOS1P29475 1434 aa11.4□□□□□ -0.58
PPFIA2-228ENST00000553058 ANKRD30AQ9BXX3 1397 aa11.4□□□□□ -0.59
PPFIA2-228ENST00000553058 TMEM2Q9UHN6 1383 aa11.4□□□□□ -0.59
PPFIA2-228ENST00000553058 TOM1O60784 492 aa11.39□□□□□ -0.59
PPFIA2-228ENST00000553058 MAPK8P45983 427 aa11.39□□□□□ -0.59
PPFIA2-228ENST00000553058 PIP4K2BP78356 416 aa11.39□□□□□ -0.59
PPFIA2-228ENST00000553058 DAB2P98082 770 aa11.39□□□□□ -0.59
PPFIA2-228ENST00000553058 PLCB3Q01970 1234 aa11.39□□□□□ -0.59
PPFIA2-228ENST00000553058 IDI1Q13907 227 aa11.39□□□□□ -0.59
PPFIA2-228ENST00000553058 NOL8Q76FK4 1167 aaKnown RBP11.39□□□□□ -0.59
PPFIA2-228ENST00000553058 DZIP3Q86Y13 1208 aaKnown RBP11.39□□□□□ -0.59
PPFIA2-228ENST00000553058 PIF1Q9H611 641 aa11.39□□□□□ -0.59
PPFIA2-228ENST00000553058 TBX22Q9Y458 520 aa11.39□□□□□ -0.59
PPFIA2-228ENST00000553058 SALL2Q9Y467 1007 aaPredicted RBP11.39□□□□□ -0.59
PPFIA2-228ENST00000553058 SYNMO15061 1565 aa11.38□□□□□ -0.59
PPFIA2-228ENST00000553058 TNNI2P48788 182 aa11.38□□□□□ -0.59
PPFIA2-228ENST00000553058 PSMD2Q13200 908 aa11.38□□□□□ -0.59
PPFIA2-228ENST00000553058 EGFLAMQ63HQ2 1017 aa11.38□□□□□ -0.59
PPFIA2-228ENST00000553058 TMC1Q8TDI8 760 aa11.38□□□□□ -0.59
PPFIA2-228ENST00000553058 MPSTP25325 297 aa11.37□□□□□ -0.59
PPFIA2-228ENST00000553058 DNAJA1P31689 397 aaKnown RBP11.37□□□□□ -0.59
PPFIA2-228ENST00000553058 ZBTB33Q86T24 672 aa11.37□□□□□ -0.59
PPFIA2-228ENST00000553058 GAS2L2Q8NHY3 880 aa11.37□□□□□ -0.59
PPFIA2-228ENST00000553058 PMFBP1Q8TBY8 1022 aa11.37□□□□□ -0.59
PPFIA2-228ENST00000553058 CITED4Q96RK1 184 aa11.37□□□□□ -0.59
PPFIA2-228ENST00000553058 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.37□□□□□ -0.59
PPFIA2-228ENST00000553058 EFCAB6Q5THR3 1501 aa11.36□□□□□ -0.59
PPFIA2-228ENST00000553058 PIK3C2BO00750 1634 aa11.36□□□□□ -0.59
PPFIA2-228ENST00000553058 M0R2N6 131 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms