RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 ZBTB39O15060 712 aa8.53□□□□□ -1.04
PPFIA2-226ENST00000552020 GNRH1P01148 92 aa8.53□□□□□ -1.04
PPFIA2-226ENST00000552020 ATP2B1P20020 1258 aa8.53□□□□□ -1.04
PPFIA2-226ENST00000552020 GTF2F1P35269 517 aaKnown RBP eCLIP8.53□□□□□ -1.04
PPFIA2-226ENST00000552020 SMTNP53814 917 aa8.53□□□□□ -1.04
PPFIA2-226ENST00000552020 FOXK2Q01167 660 aa8.53□□□□□ -1.04
PPFIA2-226ENST00000552020 MYT1Q01538 1121 aa8.53□□□□□ -1.04
PPFIA2-226ENST00000552020 STAG2Q8N3U4 1231 aa8.53□□□□□ -1.04
PPFIA2-226ENST00000552020 IQSEC3Q9UPP2 1182 aaPredicted RBP8.53□□□□□ -1.04
PPFIA2-226ENST00000552020 IGHA2P01877 340 aa8.52□□□□□ -1.05
PPFIA2-226ENST00000552020 TLR1Q15399 786 aa8.52□□□□□ -1.05
PPFIA2-226ENST00000552020 EDEM1Q92611 657 aa8.52□□□□□ -1.05
PPFIA2-226ENST00000552020 ARHGEF10LQ9HCE6 1279 aa8.52□□□□□ -1.05
PPFIA2-226ENST00000552020 ZNF232Q9UNY5 417 aa8.52□□□□□ -1.05
PPFIA2-226ENST00000552020 GNA15P30679 374 aa8.51□□□□□ -1.05
PPFIA2-226ENST00000552020 DNAJA1P31689 397 aaKnown RBP8.51□□□□□ -1.05
PPFIA2-226ENST00000552020 TNNI2P48788 182 aa8.51□□□□□ -1.05
PPFIA2-226ENST00000552020 SKOR1P84550 965 aa8.51□□□□□ -1.05
PPFIA2-226ENST00000552020 FAM26DQ5JW98 314 aa8.51□□□□□ -1.05
PPFIA2-226ENST00000552020 MYO19Q96H55 970 aa8.51□□□□□ -1.05
PPFIA2-226ENST00000552020 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.51□□□□□ -1.05
PPFIA2-226ENST00000552020 MZF1P28698 734 aaPredicted RBP8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 USP5P45974 858 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 WNT7BP56706 349 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 DGKZQ13574 1117 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 GIMAP6Q6P9H5 292 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 GJD3Q8N144 294 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 SLC43A3Q8NBI5 491 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 TTC16Q8NEE8 873 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 PDZRN3Q9UPQ7 1066 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 EMILIN1Q9Y6C2 1016 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 USP3Q9Y6I4 520 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 TLL2Q9Y6L7 1015 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 IFT140Q96RY7 1462 aa8.5□□□□□ -1.05
PPFIA2-226ENST00000552020 MROH2BQ7Z745 1585 aa8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 SERTM1A2A2V5 107 aa8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 PDGFAP04085 211 aa8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 PCSK2P16519 638 aa8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 NCLP19338 710 aaKnown RBP8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 ZAP70P43403 619 aa8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 MTFR1Q15390 333 aa8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 PPP1R26Q5T8A7 1209 aaPredicted RBP8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 CCDC116Q8IYX3 515 aa8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 CSRNP1Q96S65 589 aa8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 LNPKQ9C0E8 428 aa8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 INPP5FQ9Y2H2 1132 aa8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 HCN4Q9Y3Q4 1203 aa8.49□□□□□ -1.05
PPFIA2-226ENST00000552020 EIF4G3O43432 1585 aaKnown RBP8.48□□□□□ -1.05
PPFIA2-226ENST00000552020 LILRA1O75019 489 aa8.48□□□□□ -1.05
PPFIA2-226ENST00000552020 C8orf34Q49A92 452 aa8.48□□□□□ -1.05
PPFIA2-226ENST00000552020 SH3PXD2AQ5TCZ1 1133 aa8.48□□□□□ -1.05
PPFIA2-226ENST00000552020 ETFBKMTQ8IXQ9 262 aa8.48□□□□□ -1.05
PPFIA2-226ENST00000552020 NBPF15Q8N660 670 aa8.48□□□□□ -1.05
PPFIA2-226ENST00000552020 PMFBP1Q8TBY8 1022 aa8.48□□□□□ -1.05
PPFIA2-226ENST00000552020 CRELD1Q96HD1 420 aa8.48□□□□□ -1.05
PPFIA2-226ENST00000552020 NLRP2Q9NX02 1062 aa8.48□□□□□ -1.05
PPFIA2-226ENST00000552020 CABP1Q9NZU7 370 aa8.48□□□□□ -1.05
PPFIA2-226ENST00000552020 KLK14Q9P0G3 267 aa8.48□□□□□ -1.05
PPFIA2-226ENST00000552020 ANKRD62A6NC57 917 aa8.47□□□□□ -1.05
PPFIA2-226ENST00000552020 CDK2AP1O14519 115 aa8.47□□□□□ -1.05
PPFIA2-226ENST00000552020 LCE2BO14633 110 aa8.47□□□□□ -1.05
PPFIA2-226ENST00000552020 IL2RAP01589 272 aa8.47□□□□□ -1.05
PPFIA2-226ENST00000552020 ORC1Q13415 861 aa8.47□□□□□ -1.05
PPFIA2-226ENST00000552020 C11orf91Q3C1V1 193 aa8.47□□□□□ -1.05
PPFIA2-226ENST00000552020 ALDH16A1Q8IZ83 802 aa8.47□□□□□ -1.05
PPFIA2-226ENST00000552020 IFT43Q96FT9 208 aa8.47□□□□□ -1.05
PPFIA2-226ENST00000552020 PCDHGB7Q9Y5F8 929 aa8.47□□□□□ -1.05
PPFIA2-226ENST00000552020 ADD1P35611 737 aaKnown RBP8.46□□□□□ -1.06
PPFIA2-226ENST00000552020 GRM5P41594 1212 aa8.46□□□□□ -1.06
PPFIA2-226ENST00000552020 RTN1Q16799 776 aa8.46□□□□□ -1.06
PPFIA2-226ENST00000552020 ZNF394Q53GI3 561 aa8.46□□□□□ -1.06
PPFIA2-226ENST00000552020 GPR152Q8TDT2 470 aa8.46□□□□□ -1.06
PPFIA2-226ENST00000552020 FBF1Q8TES7 1133 aa8.46□□□□□ -1.06
PPFIA2-226ENST00000552020 CNKSR1Q969H4 720 aa8.46□□□□□ -1.06
PPFIA2-226ENST00000552020 XAGE2Q96GT9 111 aa8.46□□□□□ -1.06
PPFIA2-226ENST00000552020 CDK15Q96Q40 435 aa8.46□□□□□ -1.06
PPFIA2-226ENST00000552020 SPG7Q9UQ90 795 aa8.46□□□□□ -1.06
PPFIA2-226ENST00000552020 PARP3Q9Y6F1 533 aa8.46□□□□□ -1.06
PPFIA2-226ENST00000552020 EML1O00423 815 aa8.45□□□□□ -1.06
PPFIA2-226ENST00000552020 EIF1AYO14602 144 aaKnown RBP8.45□□□□□ -1.06
PPFIA2-226ENST00000552020 EIF4BP23588 611 aaKnown RBP8.45□□□□□ -1.06
PPFIA2-226ENST00000552020 PLA2G2CQ5R387 149 aa8.45□□□□□ -1.06
PPFIA2-226ENST00000552020 RC3H1Q5TC82 1133 aaKnown RBP8.45□□□□□ -1.06
PPFIA2-226ENST00000552020 NUDT16Q96DE0 195 aaKnown RBP8.45□□□□□ -1.06
PPFIA2-226ENST00000552020 CFHR5Q9BXR6 569 aa8.45□□□□□ -1.06
PPFIA2-226ENST00000552020 CUEDC1Q9NWM3 386 aaPredicted RBP8.45□□□□□ -1.06
PPFIA2-226ENST00000552020 PGPEP1Q9NXJ5 209 aa8.45□□□□□ -1.06
PPFIA2-226ENST00000552020 TMA7Q9Y2S6 64 aaKnown RBP8.45□□□□□ -1.06
PPFIA2-226ENST00000552020 AK5Q9Y6K8 562 aa8.45□□□□□ -1.06
PPFIA2-226ENST00000552020 ADH1CP00326 375 aa8.44□□□□□ -1.06
PPFIA2-226ENST00000552020 NOS2P35228 1153 aa8.44□□□□□ -1.06
PPFIA2-226ENST00000552020 ARID5AQ03989 594 aa8.44□□□□□ -1.06
PPFIA2-226ENST00000552020 ZNF787Q6DD87 383 aa8.44□□□□□ -1.06
PPFIA2-226ENST00000552020 NOP9Q86U38 636 aaKnown RBP8.44□□□□□ -1.06
PPFIA2-226ENST00000552020 USP48Q86UV5 1035 aa8.44□□□□□ -1.06
PPFIA2-226ENST00000552020 ZNF654Q8IZM8 581 aa8.44□□□□□ -1.06
PPFIA2-226ENST00000552020 FRMD6Q96NE9 622 aa8.44□□□□□ -1.06
PPFIA2-226ENST00000552020 PHACTR1Q9C0D0 580 aa8.44□□□□□ -1.06
PPFIA2-226ENST00000552020 AQRO60306 1485 aaKnown RBP eCLIP8.44□□□□□ -1.06
PPFIA2-226ENST00000552020 CFTRP13569 1480 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms