RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 AEBP2Q6ZN18 517 aaPredicted RBP22.14■■□□□ 1.13
PPFIA2-226ENST00000552020 CHIC1Q5VXU3 224 aa20.98■□□□□ 0.95
PPFIA2-226ENST00000552020 SENP3Q9H4L4 574 aaPredicted RBP18.99■□□□□ 0.63
PPFIA2-226ENST00000552020 PHF23Q9BUL5 403 aaPredicted RBP18.72■□□□□ 0.59
PPFIA2-226ENST00000552020 FOXD1Q16676 465 aa17.67■□□□□ 0.42
PPFIA2-226ENST00000552020 PLPPR3Q6T4P5 718 aa16.77■□□□□ 0.28
PPFIA2-226ENST00000552020 MSH5O43196 834 aa16.62■□□□□ 0.25
PPFIA2-226ENST00000552020 PIAS4Q8N2W9 510 aaPredicted RBP16.56■□□□□ 0.24
PPFIA2-226ENST00000552020 PPP6R1Q9UPN7 881 aa16.43■□□□□ 0.22
PPFIA2-226ENST00000552020 ADRA2BP18089 450 aa16.42■□□□□ 0.22
PPFIA2-226ENST00000552020 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
PPFIA2-226ENST00000552020 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
PPFIA2-226ENST00000552020 KCNA4P22459 653 aa15.36■□□□□ 0.05
PPFIA2-226ENST00000552020 MAPK8IP2Q13387 824 aaPredicted RBP15.1■□□□□ 0.01
PPFIA2-226ENST00000552020 SCAF1Q9H7N4 1312 aaKnown RBP15.1■□□□□ 0.01
PPFIA2-226ENST00000552020 DMRT2Q9Y5R5 561 aa15□□□□□ -0.01
PPFIA2-226ENST00000552020 SLC4A1APQ9BWU0 796 aaKnown RBP14.81□□□□□ -0.04
PPFIA2-226ENST00000552020 CSRNP3Q8WYN3 585 aa14.75□□□□□ -0.05
PPFIA2-226ENST00000552020 PPP4R3CPQ6ZMV5 832 aa14.69□□□□□ -0.06
PPFIA2-226ENST00000552020 NCBP3Q53F19 620 aaKnown RBP14.56□□□□□ -0.08
PPFIA2-226ENST00000552020 DCAF8L1A6NGE4 600 aa14.55□□□□□ -0.08
PPFIA2-226ENST00000552020 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
PPFIA2-226ENST00000552020 HOXD11P31277 338 aaPredicted RBP14.4□□□□□ -0.1
PPFIA2-226ENST00000552020 CACNB1Q02641 598 aaPredicted RBP14.37□□□□□ -0.11
PPFIA2-226ENST00000552020 NPM3O75607 178 aaKnown RBP14.34□□□□□ -0.11
PPFIA2-226ENST00000552020 RNF216Q9NWF9 866 aaPredicted RBP14.3□□□□□ -0.12
PPFIA2-226ENST00000552020 ZBTB22O15209 634 aa14.12□□□□□ -0.15
PPFIA2-226ENST00000552020 RNF39Q9H2S5 420 aa14.12□□□□□ -0.15
PPFIA2-226ENST00000552020 C1QBPQ07021 282 aaKnown RBP13.95□□□□□ -0.18
PPFIA2-226ENST00000552020 DNAJC5BQ9UF47 199 aa13.9□□□□□ -0.18
PPFIA2-226ENST00000552020 FOXD4L1Q9NU39 408 aa13.87□□□□□ -0.19
PPFIA2-226ENST00000552020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.84□□□□□ -0.19
PPFIA2-226ENST00000552020 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
PPFIA2-226ENST00000552020 RTN4Q9NQC3 1192 aaKnown RBP13.69□□□□□ -0.22
PPFIA2-226ENST00000552020 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
PPFIA2-226ENST00000552020 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
PPFIA2-226ENST00000552020 FKBP8Q14318 412 aa13.37□□□□□ -0.27
PPFIA2-226ENST00000552020 CAPN15O75808 1086 aa13.36□□□□□ -0.27
PPFIA2-226ENST00000552020 SLC4A2P04920 1241 aa13.3□□□□□ -0.28
PPFIA2-226ENST00000552020 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
PPFIA2-226ENST00000552020 MYCNP04198 464 aaPredicted RBP13.23□□□□□ -0.29
PPFIA2-226ENST00000552020 ATXN8OSP0DMR3 200 aa13.23□□□□□ -0.29
PPFIA2-226ENST00000552020 DSG3P32926 999 aa13.21□□□□□ -0.29
PPFIA2-226ENST00000552020 APLP2Q06481 763 aa13.17□□□□□ -0.3
PPFIA2-226ENST00000552020 TRHP20396 242 aaPredicted RBP13.12□□□□□ -0.31
PPFIA2-226ENST00000552020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.11□□□□□ -0.31
PPFIA2-226ENST00000552020 HNRNPUL2Q1KMD3 747 aaKnown RBP13.11□□□□□ -0.31
PPFIA2-226ENST00000552020 ZNF219Q9P2Y4 722 aaPredicted RBP13.05□□□□□ -0.32
PPFIA2-226ENST00000552020 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
PPFIA2-226ENST00000552020 ABCB7O75027 752 aa13.01□□□□□ -0.33
PPFIA2-226ENST00000552020 ATF5Q9Y2D1 282 aaPredicted RBP12.82□□□□□ -0.36
PPFIA2-226ENST00000552020 POTEHQ6S545 545 aa12.81□□□□□ -0.36
PPFIA2-226ENST00000552020 POLA2Q14181 598 aa12.71□□□□□ -0.37
PPFIA2-226ENST00000552020 RBM42Q9BTD8 480 aaKnown RBP12.68□□□□□ -0.38
PPFIA2-226ENST00000552020 FBXO3Q9UK99 471 aa12.59□□□□□ -0.39
PPFIA2-226ENST00000552020 PLCB2Q00722 1185 aa12.57□□□□□ -0.4
PPFIA2-226ENST00000552020 DCAF8L2P0C7V8 631 aa12.52□□□□□ -0.41
PPFIA2-226ENST00000552020 HAP1P54257 671 aaPredicted RBP12.5□□□□□ -0.41
PPFIA2-226ENST00000552020 SPDYE4A6NLX3 237 aa12.48□□□□□ -0.41
PPFIA2-226ENST00000552020 ZBTB12Q9Y330 459 aaPredicted RBP12.46□□□□□ -0.41
PPFIA2-226ENST00000552020 VASPP50552 380 aaPredicted RBP12.41□□□□□ -0.42
PPFIA2-226ENST00000552020 CHRDL2Q6WN34 429 aa12.4□□□□□ -0.42
PPFIA2-226ENST00000552020 AKT1S1Q96B36 256 aa12.33□□□□□ -0.44
PPFIA2-226ENST00000552020 BCANQ96GW7 911 aa12.32□□□□□ -0.44
PPFIA2-226ENST00000552020 MKRN4PQ13434 485 aaPredicted RBP12.29□□□□□ -0.44
PPFIA2-226ENST00000552020 OSCARQ8IYS5 282 aa12.29□□□□□ -0.44
PPFIA2-226ENST00000552020 IFNLR1Q8IU57 520 aaPredicted RBP12.28□□□□□ -0.44
PPFIA2-226ENST00000552020 FBLN2P98095 1184 aa12.27□□□□□ -0.45
PPFIA2-226ENST00000552020 PROM2Q8N271 834 aa12.27□□□□□ -0.45
PPFIA2-226ENST00000552020 PRKCSHP14314 528 aaPredicted RBP12.25□□□□□ -0.45
PPFIA2-226ENST00000552020 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.45
PPFIA2-226ENST00000552020 PKD2Q13563 968 aa12.2□□□□□ -0.46
PPFIA2-226ENST00000552020 VSIG10Q8N0Z9 540 aa12.2□□□□□ -0.46
PPFIA2-226ENST00000552020 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
PPFIA2-226ENST00000552020 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.13□□□□□ -0.47
PPFIA2-226ENST00000552020 KLHL34Q8N239 644 aa12.08□□□□□ -0.48
PPFIA2-226ENST00000552020 PITPNM1O00562 1244 aa12.07□□□□□ -0.48
PPFIA2-226ENST00000552020 PAXIP1Q6ZW49 1069 aaPredicted RBP12.06□□□□□ -0.48
PPFIA2-226ENST00000552020 PIP4P2Q8N4L2 257 aa12.06□□□□□ -0.48
PPFIA2-226ENST00000552020 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
PPFIA2-226ENST00000552020 TPRNQ4KMQ1 711 aa12.05□□□□□ -0.48
PPFIA2-226ENST00000552020 BBXQ8WY36 941 aaPredicted RBP12.05□□□□□ -0.48
PPFIA2-226ENST00000552020 CFAP44Q96MT7 982 aa12.05□□□□□ -0.48
PPFIA2-226ENST00000552020 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
PPFIA2-226ENST00000552020 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
PPFIA2-226ENST00000552020 SPDYE2Q495Y8 402 aa12.04□□□□□ -0.48
PPFIA2-226ENST00000552020 SPOCK2Q92563 424 aa12.03□□□□□ -0.48
PPFIA2-226ENST00000552020 KDM2AQ9Y2K7 1162 aa12□□□□□ -0.49
PPFIA2-226ENST00000552020 SP7Q8TDD2 431 aaPredicted RBP11.97□□□□□ -0.49
PPFIA2-226ENST00000552020 HAX1O00165 279 aa11.96□□□□□ -0.49
PPFIA2-226ENST00000552020 NPM1P06748 294 aaKnown RBP eCLIP11.96□□□□□ -0.49
PPFIA2-226ENST00000552020 FXR2P51116 673 aaKnown RBP eCLIP11.96□□□□□ -0.49
PPFIA2-226ENST00000552020 ZNF692Q9BU19 519 aaPredicted RBP11.92□□□□□ -0.5
PPFIA2-226ENST00000552020 CLEC11AQ9Y240 323 aa11.92□□□□□ -0.5
PPFIA2-226ENST00000552020 PLCD3Q8N3E9 789 aa11.88□□□□□ -0.51
PPFIA2-226ENST00000552020 SPDYE1Q8NFV5 336 aaPredicted RBP11.88□□□□□ -0.51
PPFIA2-226ENST00000552020 RGL2O15211 777 aa11.87□□□□□ -0.51
PPFIA2-226ENST00000552020 SPRYD3Q8NCJ5 442 aa11.87□□□□□ -0.51
PPFIA2-226ENST00000552020 TSHZ2Q9NRE2 1034 aa11.85□□□□□ -0.51
PPFIA2-226ENST00000552020 STAG3Q9UJ98 1225 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms