RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.99■□□□□ 0.31
RAPGEF3-218ENST00000548919 EIF4A1P60842 406 aaKnown RBP16.98■□□□□ 0.31
RAPGEF3-218ENST00000548919 UBE2HP62256 183 aa16.98■□□□□ 0.31
RAPGEF3-218ENST00000548919 PLCB2Q00722 1185 aa16.98■□□□□ 0.31
RAPGEF3-218ENST00000548919 DNM1Q05193 864 aaKnown RBP16.98■□□□□ 0.31
RAPGEF3-218ENST00000548919 DNTTIP2Q5QJE6 756 aaKnown RBP16.98■□□□□ 0.31
RAPGEF3-218ENST00000548919 PRPF40BQ6NWY9 871 aaKnown RBP16.98■□□□□ 0.31
RAPGEF3-218ENST00000548919 GIMAP6Q6P9H5 292 aa16.98■□□□□ 0.31
RAPGEF3-218ENST00000548919 JAKMIP1Q96N16 626 aaKnown RBP16.98■□□□□ 0.31
RAPGEF3-218ENST00000548919 DIAPH3Q9NSV4 1193 aa16.98■□□□□ 0.31
RAPGEF3-218ENST00000548919 GJB2P29033 226 aa16.98■□□□□ 0.31
RAPGEF3-218ENST00000548919 FAM184AQ8NB25 1140 aa16.97■□□□□ 0.31
RAPGEF3-218ENST00000548919 PA2G4Q9UQ80 394 aaKnown RBP16.97■□□□□ 0.31
RAPGEF3-218ENST00000548919 BABAM1Q9NWV8 329 aa16.97■□□□□ 0.31
RAPGEF3-218ENST00000548919 COL9A3Q14050 684 aaPredicted RBP16.96■□□□□ 0.31
RAPGEF3-218ENST00000548919 NECAB1Q8N987 351 aa16.96■□□□□ 0.31
RAPGEF3-218ENST00000548919 PDRG1Q9NUG6 133 aa16.96■□□□□ 0.31
RAPGEF3-218ENST00000548919 MARF1Q9Y4F3 1742 aaKnown RBP16.96■□□□□ 0.3
RAPGEF3-218ENST00000548919 GLRX3O76003 335 aaKnown RBP16.95■□□□□ 0.3
RAPGEF3-218ENST00000548919 UVSSAQ2YD98 709 aa16.95■□□□□ 0.3
RAPGEF3-218ENST00000548919 NBPF6Q5VWK0 638 aa16.95■□□□□ 0.3
RAPGEF3-218ENST00000548919 PKNOX2Q96KN3 472 aa16.95■□□□□ 0.3
RAPGEF3-218ENST00000548919 NBPF4Q96M43 638 aa16.95■□□□□ 0.3
RAPGEF3-218ENST00000548919 ADCY9O60503 1353 aa16.95■□□□□ 0.3
RAPGEF3-218ENST00000548919 VPS37CA5D8V6 355 aaPredicted RBP16.95■□□□□ 0.3
RAPGEF3-218ENST00000548919 DYNC1I1O14576 645 aa16.95■□□□□ 0.3
RAPGEF3-218ENST00000548919 ST3GAL1Q11201 340 aa16.95■□□□□ 0.3
RAPGEF3-218ENST00000548919 TSC1Q92574 1164 aa16.95■□□□□ 0.3
RAPGEF3-218ENST00000548919 MTMR6Q9Y217 621 aa16.95■□□□□ 0.3
RAPGEF3-218ENST00000548919 CEMIPQ8WUJ3 1361 aa16.94■□□□□ 0.3
RAPGEF3-218ENST00000548919 CLASRPQ8N2M8 674 aaKnown RBP16.94■□□□□ 0.3
RAPGEF3-218ENST00000548919 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.94■□□□□ 0.3
RAPGEF3-218ENST00000548919 AP5Z1O43299 807 aa16.94■□□□□ 0.3
RAPGEF3-218ENST00000548919 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
RAPGEF3-218ENST00000548919 NOLC1Q14978 699 aaKnown RBP eCLIP16.93■□□□□ 0.3
RAPGEF3-218ENST00000548919 ME3Q16798 604 aa16.93■□□□□ 0.3
RAPGEF3-218ENST00000548919 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
RAPGEF3-218ENST00000548919 TTC41PQ6P2S7 1318 aa16.93■□□□□ 0.3
RAPGEF3-218ENST00000548919 KDM4AO75164 1064 aa16.93■□□□□ 0.3
RAPGEF3-218ENST00000548919 PROSER3Q2NL68 480 aa16.93■□□□□ 0.3
RAPGEF3-218ENST00000548919 CWF19L2Q2TBE0 894 aaKnown RBP16.93■□□□□ 0.3
RAPGEF3-218ENST00000548919 HSP90AB4PQ58FF6 505 aa16.93■□□□□ 0.3
RAPGEF3-218ENST00000548919 PIBF1Q8WXW3 757 aa16.93■□□□□ 0.3
RAPGEF3-218ENST00000548919 ECHDC1Q9NTX5 307 aa16.93■□□□□ 0.3
RAPGEF3-218ENST00000548919 TBX22Q9Y458 520 aa16.93■□□□□ 0.3
RAPGEF3-218ENST00000548919 BTBD11A6QL63 1104 aa16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 VPS53Q5VIR6 699 aa16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 FAM227BQ96M60 508 aa16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 FUCA2Q9BTY2 467 aa16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 C9orf78Q9NZ63 289 aaPredicted RBP16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 MAP3K2Q9Y2U5 619 aa16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 ATP6V1DQ9Y5K8 247 aa16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 CYP46A1Q9Y6A2 500 aa16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 USP42Q9H9J4 1324 aaKnown RBP16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 LETM1O95202 739 aaPredicted RBP16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 IFIT2P09913 472 aaKnown RBP16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 KCNA6P17658 529 aa16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 FAM173BQ6P4H8 233 aa16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 TCEANC2Q96MN5 208 aa16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 ZSWIM6Q9HCJ5 1215 aa16.92■□□□□ 0.3
RAPGEF3-218ENST00000548919 PRAMEF22A3QJZ6 481 aa16.91■□□□□ 0.3
RAPGEF3-218ENST00000548919 FERMT3Q86UX7 667 aa16.91■□□□□ 0.3
RAPGEF3-218ENST00000548919 AACSQ86V21 672 aa16.91■□□□□ 0.3
RAPGEF3-218ENST00000548919 RUFY2Q8WXA3 655 aa16.91■□□□□ 0.3
RAPGEF3-218ENST00000548919 LRRC59Q96AG4 307 aaKnown RBP16.91■□□□□ 0.3
RAPGEF3-218ENST00000548919 CRYBG1Q9Y4K1 1723 aa16.91■□□□□ 0.3
RAPGEF3-218ENST00000548919 TEFQ10587 303 aa16.91■□□□□ 0.3
RAPGEF3-218ENST00000548919 RBM33Q96EV2 1170 aaKnown RBP16.91■□□□□ 0.3
RAPGEF3-218ENST00000548919 TPCN1Q9ULQ1 816 aa16.91■□□□□ 0.3
RAPGEF3-218ENST00000548919 FAM177BA6PVY3 158 aa16.9■□□□□ 0.3
RAPGEF3-218ENST00000548919 MAP7D2Q96T17 732 aa16.9■□□□□ 0.3
RAPGEF3-218ENST00000548919 KCNJ4P48050 445 aa16.9■□□□□ 0.3
RAPGEF3-218ENST00000548919 NECTIN1Q15223 517 aa16.9■□□□□ 0.3
RAPGEF3-218ENST00000548919 RBM8AQ9Y5S9 174 aaKnown RBP16.9■□□□□ 0.3
RAPGEF3-218ENST00000548919 ZNF530Q6P9A1 599 aaPredicted RBP16.89■□□□□ 0.3
RAPGEF3-218ENST00000548919 SPC24Q8NBT2 197 aa16.89■□□□□ 0.3
RAPGEF3-218ENST00000548919 CREB3L3Q68CJ9 461 aa16.89■□□□□ 0.29
RAPGEF3-218ENST00000548919 MYRIPQ8NFW9 859 aa16.89■□□□□ 0.29
RAPGEF3-218ENST00000548919 CCDC8Q9H0W5 538 aaPredicted RBP16.89■□□□□ 0.29
RAPGEF3-218ENST00000548919 TAF6LQ9Y6J9 622 aa16.89■□□□□ 0.29
RAPGEF3-218ENST00000548919 CCDC171Q6TFL3 1326 aa16.89■□□□□ 0.29
RAPGEF3-218ENST00000548919 LTN1O94822 1766 aa16.89■□□□□ 0.29
RAPGEF3-218ENST00000548919 CAMK4Q16566 473 aa16.89■□□□□ 0.29
RAPGEF3-218ENST00000548919 CDC37L1Q7L3B6 337 aa16.89■□□□□ 0.29
RAPGEF3-218ENST00000548919 NMIQ13287 307 aaPredicted RBP16.88■□□□□ 0.29
RAPGEF3-218ENST00000548919 SH2B1Q9NRF2 756 aaPredicted RBP16.88■□□□□ 0.29
RAPGEF3-218ENST00000548919 TLR7Q9NYK1 1049 aaKnown RBP16.88■□□□□ 0.29
RAPGEF3-218ENST00000548919 ZKSCAN1P17029 563 aaPredicted RBP16.88■□□□□ 0.29
RAPGEF3-218ENST00000548919 MTX1Q13505 466 aa16.88■□□□□ 0.29
RAPGEF3-218ENST00000548919 LARP1BQ659C4 914 aaKnown RBP16.88■□□□□ 0.29
RAPGEF3-218ENST00000548919 TTC6Q86TZ1 520 aa16.88■□□□□ 0.29
RAPGEF3-218ENST00000548919 IP6K1Q92551 441 aa16.88■□□□□ 0.29
RAPGEF3-218ENST00000548919 EVI5LQ96CN4 794 aa16.88■□□□□ 0.29
RAPGEF3-218ENST00000548919 ZSCAN31Q96LW9 406 aaPredicted RBP16.88■□□□□ 0.29
RAPGEF3-218ENST00000548919 HOXB7P09629 217 aa16.87■□□□□ 0.29
RAPGEF3-218ENST00000548919 KDM3BQ7LBC6 1761 aa16.87■□□□□ 0.29
RAPGEF3-218ENST00000548919 GPATCH3Q96I76 525 aa16.87■□□□□ 0.29
RAPGEF3-218ENST00000548919 TM6SF1Q9BZW5 370 aa16.87■□□□□ 0.29
RAPGEF3-218ENST00000548919 SIL1Q9H173 461 aa16.87■□□□□ 0.29
RAPGEF3-218ENST00000548919 DBF4Q9UBU7 674 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms