RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 SLC16A10Q8TF71 515 aa7.46□□□□□ -1.22
CBX5-203ENST00000547872 SCG3Q8WXD2 468 aaKnown RBP7.46□□□□□ -1.22
CBX5-203ENST00000547872 AIDAQ96BJ3 306 aa7.46□□□□□ -1.22
CBX5-203ENST00000547872 DISP3Q9P2K9 1392 aa7.46□□□□□ -1.22
CBX5-203ENST00000547872 VEGFBP49765 207 aa7.45□□□□□ -1.22
CBX5-203ENST00000547872 GAS2L2Q8NHY3 880 aa7.45□□□□□ -1.22
CBX5-203ENST00000547872 GPAMQ9HCL2 828 aa7.45□□□□□ -1.22
CBX5-203ENST00000547872 ATAD2Q6PL18 1390 aa7.45□□□□□ -1.22
CBX5-203ENST00000547872 SERTM1A2A2V5 107 aa7.44□□□□□ -1.22
CBX5-203ENST00000547872 F11P03951 625 aa7.44□□□□□ -1.22
CBX5-203ENST00000547872 TATP17735 454 aaPredicted RBP7.44□□□□□ -1.22
CBX5-203ENST00000547872 ITGA6P23229 1130 aa7.44□□□□□ -1.22
CBX5-203ENST00000547872 NOS2P35228 1153 aa7.44□□□□□ -1.22
CBX5-203ENST00000547872 TEAD4Q15561 434 aa7.44□□□□□ -1.22
CBX5-203ENST00000547872 ILDR2Q71H61 639 aa7.44□□□□□ -1.22
CBX5-203ENST00000547872 PGBD3Q8N328 593 aa7.44□□□□□ -1.22
CBX5-203ENST00000547872 L3MBTL2Q969R5 705 aa7.44□□□□□ -1.22
CBX5-203ENST00000547872 ZNF775Q96BV0 537 aaPredicted RBP7.44□□□□□ -1.22
CBX5-203ENST00000547872 PARP3Q9Y6F1 533 aa7.44□□□□□ -1.22
CBX5-203ENST00000547872 COL17A1Q9UMD9 1497 aaPredicted RBP7.43□□□□□ -1.22
CBX5-203ENST00000547872 TOP2BQ02880 1626 aa7.43□□□□□ -1.22
CBX5-203ENST00000547872 CDC14CA4D256 554 aa7.43□□□□□ -1.22
CBX5-203ENST00000547872 H3BM21 787 aa7.43□□□□□ -1.22
CBX5-203ENST00000547872 IGFBP4P22692 258 aa7.43□□□□□ -1.22
CBX5-203ENST00000547872 ZNF295-AS1Q8N0V1 137 aa7.43□□□□□ -1.22
CBX5-203ENST00000547872 ZDHHC1Q8WTX9 485 aa7.43□□□□□ -1.22
CBX5-203ENST00000547872 WRNQ14191 1432 aaPredicted RBP eCLIP7.43□□□□□ -1.22
CBX5-203ENST00000547872 H7C1W4 665 aa7.42□□□□□ -1.22
CBX5-203ENST00000547872 PRMT3O60678 531 aa7.42□□□□□ -1.22
CBX5-203ENST00000547872 MSX1P28360 303 aa7.42□□□□□ -1.22
CBX5-203ENST00000547872 C1orf216Q8TAB5 229 aa7.42□□□□□ -1.22
CBX5-203ENST00000547872 VTI1AQ96AJ9 217 aa7.42□□□□□ -1.22
CBX5-203ENST00000547872 ZDHHC3Q9NYG2 299 aa7.42□□□□□ -1.22
CBX5-203ENST00000547872 ASXL2Q76L83 1435 aa7.42□□□□□ -1.22
CBX5-203ENST00000547872 ERICH3Q5RHP9 1530 aa7.42□□□□□ -1.22
CBX5-203ENST00000547872 EML1O00423 815 aa7.41□□□□□ -1.22
CBX5-203ENST00000547872 C21orf2O43822 256 aa7.41□□□□□ -1.22
CBX5-203ENST00000547872 WEE1P30291 646 aa7.41□□□□□ -1.22
CBX5-203ENST00000547872 ARSJQ5FYB0 599 aaPredicted RBP7.41□□□□□ -1.22
CBX5-203ENST00000547872 BICDL1Q6ZP65 573 aa7.41□□□□□ -1.22
CBX5-203ENST00000547872 TRIM22Q8IYM9 498 aa7.41□□□□□ -1.22
CBX5-203ENST00000547872 STAG2Q8N3U4 1231 aa7.41□□□□□ -1.22
CBX5-203ENST00000547872 PRIMPOLQ96LW4 560 aa7.41□□□□□ -1.22
CBX5-203ENST00000547872 RUBCNLQ9H714 662 aa7.41□□□□□ -1.22
CBX5-203ENST00000547872 ABCC2Q92887 1545 aa7.41□□□□□ -1.22
CBX5-203ENST00000547872 FOXO3O43524 673 aa7.4□□□□□ -1.22
CBX5-203ENST00000547872 WFS1O76024 890 aa7.4□□□□□ -1.22
CBX5-203ENST00000547872 TXLNAP40222 546 aa7.4□□□□□ -1.22
CBX5-203ENST00000547872 EFHC2Q5JST6 749 aa7.4□□□□□ -1.22
CBX5-203ENST00000547872 SH3PXD2AQ5TCZ1 1133 aa7.4□□□□□ -1.22
CBX5-203ENST00000547872 SV2AQ7L0J3 742 aa7.4□□□□□ -1.22
CBX5-203ENST00000547872 IRF7Q92985 503 aa7.4□□□□□ -1.22
CBX5-203ENST00000547872 CLP1Q92989 425 aaKnown RBP7.4□□□□□ -1.22
CBX5-203ENST00000547872 GMCL1Q96IK5 515 aa7.4□□□□□ -1.22
CBX5-203ENST00000547872 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
CBX5-203ENST00000547872 NUCKS1Q9H1E3 243 aaKnown RBP7.4□□□□□ -1.22
CBX5-203ENST00000547872 MAP3K4Q9Y6R4 1608 aa7.4□□□□□ -1.22
CBX5-203ENST00000547872 BIVM-ERCC5R4GMW8 1640 aa7.4□□□□□ -1.22
CBX5-203ENST00000547872 SPATA31D1Q6ZQQ2 1576 aa7.39□□□□□ -1.23
CBX5-203ENST00000547872 ATP4AP20648 1035 aa7.39□□□□□ -1.23
CBX5-203ENST00000547872 HIRAP54198 1017 aaPredicted RBP7.39□□□□□ -1.23
CBX5-203ENST00000547872 NFX1Q12986 1120 aaKnown RBP7.39□□□□□ -1.23
CBX5-203ENST00000547872 FOXR1Q6PIV2 292 aa7.39□□□□□ -1.23
CBX5-203ENST00000547872 VWA5B2Q8N398 1253 aa7.39□□□□□ -1.23
CBX5-203ENST00000547872 NGLY1Q96IV0 654 aa7.39□□□□□ -1.23
CBX5-203ENST00000547872 CUEDC1Q9NWM3 386 aaPredicted RBP7.39□□□□□ -1.23
CBX5-203ENST00000547872 USTQ9Y2C2 406 aa7.39□□□□□ -1.23
CBX5-203ENST00000547872 HCN4Q9Y3Q4 1203 aa7.39□□□□□ -1.23
CBX5-203ENST00000547872 GJA3Q9Y6H8 435 aa7.39□□□□□ -1.23
CBX5-203ENST00000547872 TMEM88BA6NKF7 163 aa7.38□□□□□ -1.23
CBX5-203ENST00000547872 ATP2B4P23634 1241 aa7.38□□□□□ -1.23
CBX5-203ENST00000547872 LBRQ14739 615 aaKnown RBP7.38□□□□□ -1.23
CBX5-203ENST00000547872 RHPN1Q8TCX5 695 aa7.38□□□□□ -1.23
CBX5-203ENST00000547872 NANOS1Q8WY41 292 aaKnown RBP7.38□□□□□ -1.23
CBX5-203ENST00000547872 ZNF837Q96EG3 531 aaPredicted RBP7.38□□□□□ -1.23
CBX5-203ENST00000547872 PHACTR1Q9C0D0 580 aa7.38□□□□□ -1.23
CBX5-203ENST00000547872 CRISPLD1Q9H336 500 aa7.38□□□□□ -1.23
CBX5-203ENST00000547872 NEUROD4Q9HD90 331 aa7.38□□□□□ -1.23
CBX5-203ENST00000547872 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.38□□□□□ -1.233e-8■■■■■ 42.4
CBX5-203ENST00000547872 ZCCHC11Q5TAX3 1644 aaKnown RBP7.38□□□□□ -1.23
CBX5-203ENST00000547872 GLI2P10070 1586 aa7.37□□□□□ -1.23
CBX5-203ENST00000547872 TEX14Q8IWB6 1497 aa7.37□□□□□ -1.23
CBX5-203ENST00000547872 PTPRGP23470 1445 aa7.37□□□□□ -1.23
CBX5-203ENST00000547872 PDE4CQ08493 712 aa7.37□□□□□ -1.23
CBX5-203ENST00000547872 DBN1Q16643 649 aa7.37□□□□□ -1.23
CBX5-203ENST00000547872 C1orf53Q5VUE5 145 aa7.37□□□□□ -1.23
CBX5-203ENST00000547872 POTEAQ6S8J7 498 aa7.37□□□□□ -1.23
CBX5-203ENST00000547872 TREML4Q6UXN2 200 aa7.37□□□□□ -1.23
CBX5-203ENST00000547872 ALDH16A1Q8IZ83 802 aa7.37□□□□□ -1.23
CBX5-203ENST00000547872 RETREG2Q8NC44 543 aa7.37□□□□□ -1.23
CBX5-203ENST00000547872 CXXC1Q9P0U4 656 aaPredicted RBP7.37□□□□□ -1.23
CBX5-203ENST00000547872 PLB1Q6P1J6 1458 aa7.36□□□□□ -1.23
CBX5-203ENST00000547872 A0A1W2PNR3 127 aa7.36□□□□□ -1.23
CBX5-203ENST00000547872 VSIG8P0DPA2 414 aa7.36□□□□□ -1.23
CBX5-203ENST00000547872 FKBP5Q13451 457 aaPredicted RBP7.36□□□□□ -1.23
CBX5-203ENST00000547872 OCLNQ16625 522 aa7.36□□□□□ -1.23
CBX5-203ENST00000547872 GTPBP3Q969Y2 492 aaKnown RBP7.36□□□□□ -1.23
CBX5-203ENST00000547872 TRERF1Q96PN7 1200 aa7.36□□□□□ -1.23
CBX5-203ENST00000547872 GPC6Q9Y625 555 aaPredicted RBP7.36□□□□□ -1.23
CBX5-203ENST00000547872 EPRSP07814 1512 aaKnown RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms