RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 MKNK1Q9BUB5 465 aa4.38□□□□□ -1.71
YBX3-214ENST00000544501 RUBCNLQ9H714 662 aa4.38□□□□□ -1.71
YBX3-214ENST00000544501 GPAMQ9HCL2 828 aa4.38□□□□□ -1.71
YBX3-214ENST00000544501 GNEQ9Y223 722 aaKnown RBP4.38□□□□□ -1.71
YBX3-214ENST00000544501 GJA3Q9Y6H8 435 aa4.38□□□□□ -1.71
YBX3-214ENST00000544501 UBAP2LQ14157 1087 aaKnown RBP4.37□□□□□ -1.71
YBX3-214ENST00000544501 NAA30Q147X3 362 aaPredicted RBP4.37□□□□□ -1.71
YBX3-214ENST00000544501 CAPN12Q6ZSI9 719 aa4.37□□□□□ -1.71
YBX3-214ENST00000544501 TXNDC2Q86VQ3 553 aa4.37□□□□□ -1.71
YBX3-214ENST00000544501 HELQQ8TDG4 1101 aa4.37□□□□□ -1.71
YBX3-214ENST00000544501 GTF3C2Q8WUA4 911 aaPredicted RBP4.37□□□□□ -1.71
YBX3-214ENST00000544501 ZNF837Q96EG3 531 aaPredicted RBP4.37□□□□□ -1.71
YBX3-214ENST00000544501 SUSD3Q96L08 255 aa4.37□□□□□ -1.71
YBX3-214ENST00000544501 CFHR5Q9BXR6 569 aa4.37□□□□□ -1.71
YBX3-214ENST00000544501 CUEDC1Q9NWM3 386 aaPredicted RBP4.37□□□□□ -1.71
YBX3-214ENST00000544501 SEPT3Q9UH03 358 aa4.37□□□□□ -1.71
YBX3-214ENST00000544501 EGFL7Q9UHF1 273 aa4.37□□□□□ -1.71
YBX3-214ENST00000544501 LRFN2Q9ULH4 789 aa4.37□□□□□ -1.71
YBX3-214ENST00000544501 PCDHGC4Q9Y5F7 938 aa4.37□□□□□ -1.71
YBX3-214ENST00000544501 TGFBR3LH3BV60 316 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 THBS1P07996 1170 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 FAM157BP0CG42 384 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 BRD2P25440 801 aaKnown RBP4.36□□□□□ -1.71
YBX3-214ENST00000544501 NFX1Q12986 1120 aaKnown RBP4.36□□□□□ -1.71
YBX3-214ENST00000544501 SF3B2Q13435 895 aaKnown RBP4.36□□□□□ -1.71
YBX3-214ENST00000544501 DGKZQ13574 1117 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 LAMC2Q13753 1193 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 LRRC69Q6ZNQ3 347 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 VWA5B2Q8N398 1253 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 IRF7Q92985 503 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 TRERF1Q96PN7 1200 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 ZCCHC2Q9C0B9 1178 aaKnown RBP4.36□□□□□ -1.71
YBX3-214ENST00000544501 SAP130Q9H0E3 1048 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 STIM2Q9P246 746 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 PHF24Q9UPV7 400 aa4.36□□□□□ -1.71
YBX3-214ENST00000544501 CDC14CA4D256 554 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 TNFRSF10BO14763 440 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 ATXN7O15265 892 aaPredicted RBP4.35□□□□□ -1.71
YBX3-214ENST00000544501 NPR3P17342 541 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 SCNN1AP37088 669 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 FKBP4Q02790 459 aaKnown RBP eCLIP4.35□□□□□ -1.71
YBX3-214ENST00000544501 BTLAQ7Z6A9 289 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 ABTB2Q8N961 1025 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 ZNF280CQ8ND82 737 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 GTPBP3Q969Y2 492 aaKnown RBP4.35□□□□□ -1.71
YBX3-214ENST00000544501 IFT43Q96FT9 208 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 C11orf16Q9NQ32 467 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 NDFIP2Q9NV92 336 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 KLK14Q9P0G3 267 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 DMGDHQ9UI17 866 aaKnown RBP4.35□□□□□ -1.71
YBX3-214ENST00000544501 ATXN7L1Q9ULK2 861 aaPredicted RBP4.35□□□□□ -1.71
YBX3-214ENST00000544501 BCS1LQ9Y276 419 aa4.35□□□□□ -1.71
YBX3-214ENST00000544501 EFSO43281 561 aa4.34□□□□□ -1.71
YBX3-214ENST00000544501 BNIP3LO60238 219 aa4.34□□□□□ -1.71
YBX3-214ENST00000544501 WFS1O76024 890 aa4.34□□□□□ -1.71
YBX3-214ENST00000544501 MICAL2O94851 1124 aa4.34□□□□□ -1.71
YBX3-214ENST00000544501 FAM13AO94988 1023 aa4.34□□□□□ -1.71
YBX3-214ENST00000544501 VEGFBP49765 207 aa4.34□□□□□ -1.71
YBX3-214ENST00000544501 KCNQ4P56696 695 aa4.34□□□□□ -1.71
YBX3-214ENST00000544501 TNP2Q05952 138 aa4.34□□□□□ -1.71
YBX3-214ENST00000544501 ZNF775Q96BV0 537 aaPredicted RBP4.34□□□□□ -1.71
YBX3-214ENST00000544501 KLRG1Q96E93 195 aa4.34□□□□□ -1.71
YBX3-214ENST00000544501 HSH2DQ96JZ2 352 aa4.34□□□□□ -1.71
YBX3-214ENST00000544501 DNMT3AQ9Y6K1 912 aaPredicted RBP4.34□□□□□ -1.71
YBX3-214ENST00000544501 ICMTO60725 284 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 ABL1P00519 1130 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 MAPTP10636 758 aaKnown RBP4.33□□□□□ -1.72
YBX3-214ENST00000544501 EPB42P16452 691 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 INPP5BP32019 993 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 SERPINB4P48594 390 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 TYRO3Q06418 890 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 FAM182BQ5T319 152 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 ALKBH2Q6NS38 261 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 TREML4Q6UXN2 200 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 TREML1Q86YW5 311 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 ETFBKMTQ8IXQ9 262 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 CEP63Q96MT8 703 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 EFCC1Q9HA90 598 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 BRD7Q9NPI1 651 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 FAM13BQ9NYF5 915 aa4.33□□□□□ -1.72
YBX3-214ENST00000544501 ERBB4Q15303 1308 aa4.32□□□□□ -1.72
YBX3-214ENST00000544501 OPLAHO14841 1288 aa4.32□□□□□ -1.72
YBX3-214ENST00000544501 KHNYNO15037 678 aaKnown RBP4.32□□□□□ -1.72
YBX3-214ENST00000544501 FGFR3P22607 806 aa4.32□□□□□ -1.72
YBX3-214ENST00000544501 IDH3AP50213 366 aa4.32□□□□□ -1.72
YBX3-214ENST00000544501 ARSDP51689 593 aa4.32□□□□□ -1.72
YBX3-214ENST00000544501 NOM1Q5C9Z4 860 aaKnown RBP4.32□□□□□ -1.72
YBX3-214ENST00000544501 AEBP1Q8IUX7 1158 aa4.32□□□□□ -1.72
YBX3-214ENST00000544501 GPR161Q8N6U8 529 aaKnown RBP4.32□□□□□ -1.72
YBX3-214ENST00000544501 ABHD17AQ96GS6 310 aa4.32□□□□□ -1.72
YBX3-214ENST00000544501 MARK1Q9P0L2 795 aa4.32□□□□□ -1.72
YBX3-214ENST00000544501 IVNS1ABPQ9Y6Y0 642 aa4.32□□□□□ -1.72
YBX3-214ENST00000544501 DCDC2BA2VCK2 349 aa4.31□□□□□ -1.72
YBX3-214ENST00000544501 SOWAHDA6NJG2 315 aa4.31□□□□□ -1.72
YBX3-214ENST00000544501 H3BRB1 525 aa4.31□□□□□ -1.72
YBX3-214ENST00000544501 GPR25O00155 361 aa4.31□□□□□ -1.72
YBX3-214ENST00000544501 ZBTB39O15060 712 aa4.31□□□□□ -1.72
YBX3-214ENST00000544501 RPLP1P05386 114 aaKnown RBP4.31□□□□□ -1.72
YBX3-214ENST00000544501 MPSTP25325 297 aa4.31□□□□□ -1.72
YBX3-214ENST00000544501 ZAP70P43403 619 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms