RNA–Protein interactions for RNA: ENST00000542846.5

LRTOMT-220, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 5

Gene LRTOMT, Length 527 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-220ENST00000542846 PDIA6Q15084 440 aa8.16□□□□□ -1.1
LRTOMT-220ENST00000542846 KRT24Q2M2I5 525 aa8.16□□□□□ -1.1
LRTOMT-220ENST00000542846 MAP3K15Q6ZN16 1313 aa8.16□□□□□ -1.1
LRTOMT-220ENST00000542846 LRP10Q7Z4F1 713 aa8.16□□□□□ -1.1
LRTOMT-220ENST00000542846 SETDB2Q96T68 719 aa8.16□□□□□ -1.1
LRTOMT-220ENST00000542846 MBIPQ9NS73 344 aa8.16□□□□□ -1.1
LRTOMT-220ENST00000542846 ATP10DQ9P241 1426 aa8.16□□□□□ -1.1
LRTOMT-220ENST00000542846 ARFGEF2Q9Y6D5 1785 aa8.15□□□□□ -1.1
LRTOMT-220ENST00000542846 MYL6BP14649 208 aa8.15□□□□□ -1.1
LRTOMT-220ENST00000542846 EIF2S2P20042 333 aaKnown RBP8.15□□□□□ -1.1
LRTOMT-220ENST00000542846 HLFQ16534 295 aa8.15□□□□□ -1.1
LRTOMT-220ENST00000542846 PRR5LQ6MZQ0 368 aa8.15□□□□□ -1.1
LRTOMT-220ENST00000542846 KIF6Q6ZMV9 814 aa8.15□□□□□ -1.1
LRTOMT-220ENST00000542846 TTLL7Q6ZT98 887 aa8.15□□□□□ -1.1
LRTOMT-220ENST00000542846 WWC1Q8IX03 1113 aa8.15□□□□□ -1.1
LRTOMT-220ENST00000542846 PDZRN3Q9UPQ7 1066 aa8.15□□□□□ -1.1
LRTOMT-220ENST00000542846 IBTKQ9P2D0 1353 aaPredicted RBP8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 IL16Q14005 1332 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 CHRNA5P30532 468 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 ST5P78524 1137 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 PROSER3Q2NL68 480 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 HDGFL1Q5TGJ6 251 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 DUSP27Q5VZP5 1158 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 NGEFQ8N5V2 710 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 CNBD1Q8NA66 436 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 BRIP1Q9BX63 1249 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 DDX21Q9NR30 783 aaKnown RBP eCLIP8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 PIM2Q9P1W9 311 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 WWC3Q9ULE0 1092 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 NIP7Q9Y221 180 aaKnown RBP eCLIP8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 BCS1LQ9Y276 419 aa8.14□□□□□ -1.11
LRTOMT-220ENST00000542846 H0YIN7 160 aa8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 ANXA1P04083 346 aa8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 PDE6BP35913 854 aa8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 DALRD3Q5D0E6 543 aaKnown RBP8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 GIGYF2Q6Y7W6 1299 aaKnown RBP8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 NBPF5PQ86XG9 351 aaPredicted RBP8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 C2CD5Q86YS7 1000 aa8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 FAM9BQ8IZU0 186 aa8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 NECTIN2Q92692 538 aa8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 ZBTB3Q9H5J0 574 aa8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 CHPF2Q9P2E5 772 aa8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 DBF4Q9UBU7 674 aaPredicted RBP8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 TNRC6CQ9HCJ0 1690 aaKnown RBP8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 CACNA1SQ13698 1873 aa8.13□□□□□ -1.11
LRTOMT-220ENST00000542846 RIC1Q4ADV7 1423 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 CCER2I3L3R5 266 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 NPHP1O15259 732 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 TPTE2Q6XPS3 522 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 COPS6Q7L5N1 327 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 WDR63Q8IWG1 891 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 ZNF34Q8IZ26 560 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 CCDC24Q8N4L8 307 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 C8orf58Q8NAV2 365 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 XAGE3Q8WTP9 111 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 CHMP4AQ9BY43 222 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 NYXQ9GZU5 481 aa8.12□□□□□ -1.11
LRTOMT-220ENST00000542846 ADCY9O60503 1353 aa8.11□□□□□ -1.11
LRTOMT-220ENST00000542846 UBN2Q6ZU65 1347 aa8.11□□□□□ -1.11
LRTOMT-220ENST00000542846 SENP3-EIF4A1A0A087X0R7 540 aa8.11□□□□□ -1.11
LRTOMT-220ENST00000542846 KLRG2A4D1S0 409 aaPredicted RBP8.11□□□□□ -1.11
LRTOMT-220ENST00000542846 PARP10Q53GL7 1025 aa8.11□□□□□ -1.11
LRTOMT-220ENST00000542846 HSP90AB3PQ58FF7 597 aa8.11□□□□□ -1.11
LRTOMT-220ENST00000542846 TTLL6Q8N841 843 aa8.11□□□□□ -1.11
LRTOMT-220ENST00000542846 TSR2Q969E8 191 aaKnown RBP8.11□□□□□ -1.11
LRTOMT-220ENST00000542846 HYPKQ9NX55 129 aa8.11□□□□□ -1.11
LRTOMT-220ENST00000542846 SBF1O95248 1867 aa8.11□□□□□ -1.11
LRTOMT-220ENST00000542846 ABCC12Q96J65 1359 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 RNF123Q5XPI4 1314 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 FANCIQ9NVI1 1328 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 CACNA1FO60840 1977 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 FAM177BA6PVY3 158 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 ELL2O00472 640 aaPredicted RBP8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 NTSR2O95665 410 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 SRGNP10124 158 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 GPTP24298 496 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 AIMP1Q12904 312 aaKnown RBP8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 STYK1Q6J9G0 422 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 ARHGAP27Q6ZUM4 889 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 ZNF784Q8NCA9 323 aaPredicted RBP8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 PLBD2Q8NHP8 589 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 SALL2Q9Y467 1007 aaPredicted RBP8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 FER1L6Q2WGJ9 1857 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 SLX4Q8IY92 1834 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 LAMB2P55268 1798 aa8.1□□□□□ -1.11
LRTOMT-220ENST00000542846 ZNF521Q96K83 1311 aa8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 GTF2E1P29083 439 aaPredicted RBP8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 TCIRG1Q13488 830 aa8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 TWISTNBQ3B726 338 aaPredicted RBP8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 CCDC30Q5VVM6 783 aa8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 SUSD4Q5VX71 490 aa8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 ANKRD13DQ6ZTN6 518 aa8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 PPP1R42Q7Z4L9 355 aa8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 TSPYL6Q8N831 410 aa8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 CNKSR1Q969H4 720 aa8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 ZNF622Q969S3 477 aaKnown RBP eCLIP8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 MASTLQ96GX5 879 aa8.09□□□□□ -1.11
LRTOMT-220ENST00000542846 NPR1P16066 1061 aa8.08□□□□□ -1.12
LRTOMT-220ENST00000542846 GOLGA2Q08379 1002 aa8.08□□□□□ -1.12
LRTOMT-220ENST00000542846 CRY2Q49AN0 593 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms