RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 KANK3Q6NY19 840 aa9.63□□□□□ -0.87
SUDS3-202ENST00000541280 SLC9A9Q8IVB4 645 aa9.63□□□□□ -0.87
SUDS3-202ENST00000541280 OGFOD1Q8N543 542 aa9.63□□□□□ -0.87
SUDS3-202ENST00000541280 ZIC5Q96T25 663 aa9.63□□□□□ -0.87
SUDS3-202ENST00000541280 GDF2Q9UK05 429 aaPredicted RBP9.63□□□□□ -0.87
SUDS3-202ENST00000541280 MAFBQ9Y5Q3 323 aaPredicted RBP9.63□□□□□ -0.87
SUDS3-202ENST00000541280 GPC6Q9Y625 555 aaPredicted RBP9.63□□□□□ -0.87
SUDS3-202ENST00000541280 ARHGEF11O15085 1522 aa9.62□□□□□ -0.87
SUDS3-202ENST00000541280 ERICH3Q5RHP9 1530 aa9.62□□□□□ -0.87
SUDS3-202ENST00000541280 SAMD5Q5TGI4 173 aa9.62□□□□□ -0.87
SUDS3-202ENST00000541280 SYNJ1O43426 1573 aa9.62□□□□□ -0.87
SUDS3-202ENST00000541280 BIVM-ERCC5R4GMW8 1640 aa9.61□□□□□ -0.87
SUDS3-202ENST00000541280 EML1O00423 815 aa9.61□□□□□ -0.87
SUDS3-202ENST00000541280 C2CD2LO14523 706 aa9.61□□□□□ -0.87
SUDS3-202ENST00000541280 ATXN7O15265 892 aaPredicted RBP9.61□□□□□ -0.87
SUDS3-202ENST00000541280 FAM157BP0CG42 384 aa9.61□□□□□ -0.87
SUDS3-202ENST00000541280 NOS2P35228 1153 aa9.61□□□□□ -0.87
SUDS3-202ENST00000541280 FAM182BQ5T319 152 aa9.61□□□□□ -0.87
SUDS3-202ENST00000541280 TNS4Q8IZW8 715 aa9.61□□□□□ -0.87
SUDS3-202ENST00000541280 TMEM151AQ8N4L1 468 aa9.61□□□□□ -0.87
SUDS3-202ENST00000541280 L3MBTL2Q969R5 705 aa9.61□□□□□ -0.87
SUDS3-202ENST00000541280 TFIP11Q9UBB9 837 aaKnown RBP9.61□□□□□ -0.87
SUDS3-202ENST00000541280 GDF11O95390 407 aa9.6□□□□□ -0.87
SUDS3-202ENST00000541280 BMP4P12644 408 aa9.6□□□□□ -0.87
SUDS3-202ENST00000541280 TXLNAP40222 546 aa9.6□□□□□ -0.87
SUDS3-202ENST00000541280 HIRAP54198 1017 aaPredicted RBP9.6□□□□□ -0.87
SUDS3-202ENST00000541280 CTBSQ01459 385 aa9.6□□□□□ -0.87
SUDS3-202ENST00000541280 TNP2Q05952 138 aa9.6□□□□□ -0.87
SUDS3-202ENST00000541280 GOLGA6L1Q8N7Z2 621 aa9.6□□□□□ -0.87
SUDS3-202ENST00000541280 C7orf43Q8WVR3 580 aa9.6□□□□□ -0.87
SUDS3-202ENST00000541280 HCN2Q9UL51 889 aa9.6□□□□□ -0.87
SUDS3-202ENST00000541280 ABCA5Q8WWZ7 1642 aa9.6□□□□□ -0.87
SUDS3-202ENST00000541280 GRIN2AQ12879 1464 aa9.59□□□□□ -0.87
SUDS3-202ENST00000541280 NUP160Q12769 1436 aa9.59□□□□□ -0.87
SUDS3-202ENST00000541280 ARSJQ5FYB0 599 aaPredicted RBP9.59□□□□□ -0.87
SUDS3-202ENST00000541280 SLCO4C1Q6ZQN7 724 aa9.59□□□□□ -0.87
SUDS3-202ENST00000541280 C1orf229Q6ZS94 237 aaPredicted RBP9.59□□□□□ -0.87
SUDS3-202ENST00000541280 PPP1R12CQ9BZL4 782 aa9.59□□□□□ -0.87
SUDS3-202ENST00000541280 PARP3Q9Y6F1 533 aa9.59□□□□□ -0.87
SUDS3-202ENST00000541280 ARAFP10398 606 aa9.58□□□□□ -0.88
SUDS3-202ENST00000541280 MAPTP10636 758 aaKnown RBP9.58□□□□□ -0.88
SUDS3-202ENST00000541280 IRS1P35568 1242 aa9.58□□□□□ -0.88
SUDS3-202ENST00000541280 PSMA6P60900 246 aaKnown RBP9.58□□□□□ -0.88
SUDS3-202ENST00000541280 NEDD1Q8NHV4 660 aa9.58□□□□□ -0.88
SUDS3-202ENST00000541280 SERTM1A2A2V5 107 aa9.57□□□□□ -0.88
SUDS3-202ENST00000541280 PHF20L1A8MW92 1017 aa9.57□□□□□ -0.88
SUDS3-202ENST00000541280 EFSO43281 561 aa9.57□□□□□ -0.88
SUDS3-202ENST00000541280 LAMC2Q13753 1193 aa9.57□□□□□ -0.88
SUDS3-202ENST00000541280 CALR3Q96L12 384 aaKnown RBP9.57□□□□□ -0.88
SUDS3-202ENST00000541280 TSPAN10Q9H1Z9 355 aaPredicted RBP9.57□□□□□ -0.88
SUDS3-202ENST00000541280 AVENQ9NQS1 362 aaPredicted RBP9.57□□□□□ -0.88
SUDS3-202ENST00000541280 DNMT3AQ9Y6K1 912 aaPredicted RBP9.57□□□□□ -0.88
SUDS3-202ENST00000541280 CLASP1Q7Z460 1538 aa9.56□□□□□ -0.88
SUDS3-202ENST00000541280 CARMIL1Q5VZK9 1371 aa9.56□□□□□ -0.88
SUDS3-202ENST00000541280 SHISA8B8ZZ34 492 aa9.56□□□□□ -0.88
SUDS3-202ENST00000541280 KANK4Q5T7N3 995 aaPredicted RBP9.56□□□□□ -0.88
SUDS3-202ENST00000541280 C1orf53Q5VUE5 145 aa9.56□□□□□ -0.88
SUDS3-202ENST00000541280 BEND7Q8N7W2 519 aaPredicted RBP9.56□□□□□ -0.88
SUDS3-202ENST00000541280 TBCELQ5QJ74 424 aa9.55□□□□□ -0.88
SUDS3-202ENST00000541280 SH3PXD2AQ5TCZ1 1133 aa9.55□□□□□ -0.88
SUDS3-202ENST00000541280 BICDL1Q6ZP65 573 aa9.55□□□□□ -0.88
SUDS3-202ENST00000541280 STAG2Q8N3U4 1231 aa9.55□□□□□ -0.88
SUDS3-202ENST00000541280 GALNT6Q8NCL4 622 aa9.55□□□□□ -0.88
SUDS3-202ENST00000541280 EDARADDQ8WWZ3 215 aa9.55□□□□□ -0.88
SUDS3-202ENST00000541280 ZNF594Q96JF6 807 aaPredicted RBP9.55□□□□□ -0.88
SUDS3-202ENST00000541280 RIMBP3CA6NJZ7 1639 aa9.55□□□□□ -0.88
SUDS3-202ENST00000541280 RIMBP3BA6NNM3 1639 aa9.55□□□□□ -0.88
SUDS3-202ENST00000541280 RIMBP3Q9UFD9 1639 aa9.55□□□□□ -0.88
SUDS3-202ENST00000541280 CNTNAP5Q8WYK1 1306 aa9.55□□□□□ -0.88
SUDS3-202ENST00000541280 DCDC2BA2VCK2 349 aa9.54□□□□□ -0.88
SUDS3-202ENST00000541280 SFI1A8K8P3 1242 aa9.54□□□□□ -0.88
SUDS3-202ENST00000541280 RASA1P20936 1047 aa9.54□□□□□ -0.88
SUDS3-202ENST00000541280 PODNQ7Z5L7 613 aa9.54□□□□□ -0.88
SUDS3-202ENST00000541280 KCTD17Q8N5Z5 321 aa9.54□□□□□ -0.88
SUDS3-202ENST00000541280 TSEN2Q8NCE0 465 aaKnown RBP9.54□□□□□ -0.88
SUDS3-202ENST00000541280 GGA1Q9UJY5 639 aa9.54□□□□□ -0.88
SUDS3-202ENST00000541280 GJA3Q9Y6H8 435 aa9.54□□□□□ -0.88
SUDS3-202ENST00000541280 ARAP1Q96P48 1450 aa9.53□□□□□ -0.88
SUDS3-202ENST00000541280 KHNYNO15037 678 aaKnown RBP9.53□□□□□ -0.88
SUDS3-202ENST00000541280 C21orf2O43822 256 aa9.53□□□□□ -0.88
SUDS3-202ENST00000541280 EPXP11678 715 aa9.53□□□□□ -0.88
SUDS3-202ENST00000541280 SEC13P55735 322 aa9.53□□□□□ -0.88
SUDS3-202ENST00000541280 PTK7Q13308 1070 aa9.53□□□□□ -0.88
SUDS3-202ENST00000541280 GAS2L2Q8NHY3 880 aa9.53□□□□□ -0.88
SUDS3-202ENST00000541280 ZNF232Q9UNY5 417 aa9.53□□□□□ -0.88
SUDS3-202ENST00000541280 RBM19Q9Y4C8 960 aaKnown RBP9.53□□□□□ -0.88
SUDS3-202ENST00000541280 FAM196BA6NMK8 535 aa9.52□□□□□ -0.89
SUDS3-202ENST00000541280 HOXB4P17483 251 aaPredicted RBP9.52□□□□□ -0.89
SUDS3-202ENST00000541280 CD33P20138 364 aa9.52□□□□□ -0.89
SUDS3-202ENST00000541280 ADAMTS12P58397 1594 aa9.52□□□□□ -0.89
SUDS3-202ENST00000541280 CHMP3Q9Y3E7 222 aa9.52□□□□□ -0.89
SUDS3-202ENST00000541280 CHD1O14646 1710 aa9.51□□□□□ -0.89
SUDS3-202ENST00000541280 CRTC2Q53ET0 693 aaPredicted RBP9.51□□□□□ -0.89
SUDS3-202ENST00000541280 LARP1Q6PKG0 1096 aaKnown RBP9.51□□□□□ -0.89
SUDS3-202ENST00000541280 STRN4Q9NRL3 753 aa9.51□□□□□ -0.89
SUDS3-202ENST00000541280 MARK1Q9P0L2 795 aa9.51□□□□□ -0.89
SUDS3-202ENST00000541280 KLF15Q9UIH9 416 aa9.51□□□□□ -0.89
SUDS3-202ENST00000541280 KIAA0586Q9BVV6 1533 aa9.51□□□□□ -0.89
SUDS3-202ENST00000541280 PRG4Q92954 1404 aaPredicted RBP9.5□□□□□ -0.89
SUDS3-202ENST00000541280 ADH6P28332 368 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms