RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 LRP10Q7Z4F1 713 aa17.36■□□□□ 0.37
CCDC130-202ENST00000540216 WDR63Q8IWG1 891 aa17.36■□□□□ 0.37
CCDC130-202ENST00000540216 DDX21Q9NR30 783 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCDC130-202ENST00000540216 ATP10DQ9P241 1426 aa17.36■□□□□ 0.37
CCDC130-202ENST00000540216 N4BP2Q86UW6 1770 aaPredicted RBP17.35■□□□□ 0.37
CCDC130-202ENST00000540216 DBF4Q9UBU7 674 aaPredicted RBP17.35■□□□□ 0.37
CCDC130-202ENST00000540216 DPEP1P16444 411 aa17.34■□□□□ 0.37
CCDC130-202ENST00000540216 YBX3P16989 372 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCDC130-202ENST00000540216 PROSER3Q2NL68 480 aa17.34■□□□□ 0.37
CCDC130-202ENST00000540216 DIEXFQ68CQ4 756 aaKnown RBP17.34■□□□□ 0.37
CCDC130-202ENST00000540216 TTLL7Q6ZT98 887 aa17.34■□□□□ 0.37
CCDC130-202ENST00000540216 CNBD1Q8NA66 436 aa17.34■□□□□ 0.37
CCDC130-202ENST00000540216 NECTIN2Q92692 538 aa17.34■□□□□ 0.37
CCDC130-202ENST00000540216 PDZRN3Q9UPQ7 1066 aa17.34■□□□□ 0.37
CCDC130-202ENST00000540216 BRCA1P38398 1863 aaKnown RBP17.33■□□□□ 0.37
CCDC130-202ENST00000540216 NUP98P52948 1817 aa17.33■□□□□ 0.37
CCDC130-202ENST00000540216 SENP3-EIF4A1A0A087X0R7 540 aa17.33■□□□□ 0.36
CCDC130-202ENST00000540216 A0A0G2JLW4 131 aa17.33■□□□□ 0.36
CCDC130-202ENST00000540216 NPHP1O15259 732 aa17.33■□□□□ 0.36
CCDC130-202ENST00000540216 HLFQ16534 295 aa17.33■□□□□ 0.36
CCDC130-202ENST00000540216 PRR5LQ6MZQ0 368 aa17.33■□□□□ 0.36
CCDC130-202ENST00000540216 NBPF5PQ86XG9 351 aaPredicted RBP17.33■□□□□ 0.36
CCDC130-202ENST00000540216 CHPF2Q9P2E5 772 aa17.33■□□□□ 0.36
CCDC130-202ENST00000540216 NIP7Q9Y221 180 aaKnown RBP eCLIP17.33■□□□□ 0.36
CCDC130-202ENST00000540216 IBTKQ9P2D0 1353 aaPredicted RBP17.32■□□□□ 0.36
CCDC130-202ENST00000540216 ST5P78524 1137 aa17.32■□□□□ 0.36
CCDC130-202ENST00000540216 GIGYF2Q6Y7W6 1299 aaKnown RBP17.32■□□□□ 0.36
CCDC130-202ENST00000540216 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
CCDC130-202ENST00000540216 TSR2Q969E8 191 aaKnown RBP17.32■□□□□ 0.36
CCDC130-202ENST00000540216 BRIP1Q9BX63 1249 aa17.32■□□□□ 0.36
CCDC130-202ENST00000540216 ZBTB3Q9H5J0 574 aa17.32■□□□□ 0.36
CCDC130-202ENST00000540216 HYPKQ9NX55 129 aa17.32■□□□□ 0.36
CCDC130-202ENST00000540216 CHD4Q14839 1912 aa17.31■□□□□ 0.36
CCDC130-202ENST00000540216 DLEC1Q9Y238 1755 aa17.31■□□□□ 0.36
CCDC130-202ENST00000540216 ANXA1P04083 346 aa17.31■□□□□ 0.36
CCDC130-202ENST00000540216 KCNA3P22001 575 aa17.31■□□□□ 0.36
CCDC130-202ENST00000540216 PDE6BP35913 854 aa17.31■□□□□ 0.36
CCDC130-202ENST00000540216 TPTE2Q6XPS3 522 aa17.31■□□□□ 0.36
CCDC130-202ENST00000540216 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
CCDC130-202ENST00000540216 XAGE3Q8WTP9 111 aa17.31■□□□□ 0.36
CCDC130-202ENST00000540216 PIM2Q9P1W9 311 aa17.31■□□□□ 0.36
CCDC130-202ENST00000540216 SALL2Q9Y467 1007 aaPredicted RBP17.31■□□□□ 0.36
CCDC130-202ENST00000540216 FANCIQ9NVI1 1328 aa17.3■□□□□ 0.36
CCDC130-202ENST00000540216 ANKRD31Q8N7Z5 1873 aa17.3■□□□□ 0.36
CCDC130-202ENST00000540216 H0YIN7 160 aa17.29■□□□□ 0.36
CCDC130-202ENST00000540216 ELL2O00472 640 aaPredicted RBP17.29■□□□□ 0.36
CCDC130-202ENST00000540216 CHRNA5P30532 468 aa17.29■□□□□ 0.36
CCDC130-202ENST00000540216 HSP90AB3PQ58FF7 597 aa17.29■□□□□ 0.36
CCDC130-202ENST00000540216 CCDC30Q5VVM6 783 aa17.29■□□□□ 0.36
CCDC130-202ENST00000540216 NYXQ9GZU5 481 aa17.29■□□□□ 0.36
CCDC130-202ENST00000540216 MYH16Q9H6N6 1097 aa17.29■□□□□ 0.36
CCDC130-202ENST00000540216 BCS1LQ9Y276 419 aa17.29■□□□□ 0.36
CCDC130-202ENST00000540216 ZNF521Q96K83 1311 aa17.28■□□□□ 0.36
CCDC130-202ENST00000540216 YY1P25490 414 aa17.28■□□□□ 0.36
CCDC130-202ENST00000540216 AIMP1Q12904 312 aaKnown RBP17.28■□□□□ 0.36
CCDC130-202ENST00000540216 PARP10Q53GL7 1025 aa17.28■□□□□ 0.36
CCDC130-202ENST00000540216 DALRD3Q5D0E6 543 aaKnown RBP17.28■□□□□ 0.36
CCDC130-202ENST00000540216 C2CD5Q86YS7 1000 aa17.28■□□□□ 0.36
CCDC130-202ENST00000540216 ZNF34Q8IZ26 560 aa17.28■□□□□ 0.36
CCDC130-202ENST00000540216 PLBD2Q8NHP8 589 aa17.28■□□□□ 0.36
CCDC130-202ENST00000540216 ARFGEF1Q9Y6D6 1849 aa17.28■□□□□ 0.36
CCDC130-202ENST00000540216 ANKRD36CQ5JPF3 1778 aa17.28■□□□□ 0.36
CCDC130-202ENST00000540216 GOLGA2Q08379 1002 aa17.27■□□□□ 0.36
CCDC130-202ENST00000540216 TWISTNBQ3B726 338 aaPredicted RBP17.27■□□□□ 0.36
CCDC130-202ENST00000540216 TSPYL6Q8N831 410 aa17.27■□□□□ 0.36
CCDC130-202ENST00000540216 WWC3Q9ULE0 1092 aa17.27■□□□□ 0.36
CCDC130-202ENST00000540216 RNF123Q5XPI4 1314 aa17.26■□□□□ 0.35
CCDC130-202ENST00000540216 UBN2Q6ZU65 1347 aa17.26■□□□□ 0.35
CCDC130-202ENST00000540216 ANKRD13DQ6ZTN6 518 aa17.26■□□□□ 0.35
CCDC130-202ENST00000540216 RIC1Q4ADV7 1423 aa17.26■□□□□ 0.35
CCDC130-202ENST00000540216 COL11A2P13942 1736 aaPredicted RBP17.25■□□□□ 0.35
CCDC130-202ENST00000540216 GPTP24298 496 aa17.25■□□□□ 0.35
CCDC130-202ENST00000540216 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
CCDC130-202ENST00000540216 PPP1R42Q7Z4L9 355 aa17.25■□□□□ 0.35
CCDC130-202ENST00000540216 STK31Q9BXU1 1019 aa17.25■□□□□ 0.35
CCDC130-202ENST00000540216 KLRG2A4D1S0 409 aaPredicted RBP17.24■□□□□ 0.35
CCDC130-202ENST00000540216 TCIRG1Q13488 830 aa17.24■□□□□ 0.35
CCDC130-202ENST00000540216 CCDC24Q8N4L8 307 aa17.24■□□□□ 0.35
CCDC130-202ENST00000540216 TTLL6Q8N841 843 aa17.24■□□□□ 0.35
CCDC130-202ENST00000540216 FAM177BA6PVY3 158 aa17.23■□□□□ 0.35
CCDC130-202ENST00000540216 NTSR2O95665 410 aa17.23■□□□□ 0.35
CCDC130-202ENST00000540216 SRGNP10124 158 aa17.23■□□□□ 0.35
CCDC130-202ENST00000540216 SUSD4Q5VX71 490 aa17.23■□□□□ 0.35
CCDC130-202ENST00000540216 STYK1Q6J9G0 422 aa17.23■□□□□ 0.35
CCDC130-202ENST00000540216 MIER1Q8N108 512 aa17.23■□□□□ 0.35
CCDC130-202ENST00000540216 ARFGEF2Q9Y6D5 1785 aa17.23■□□□□ 0.35
CCDC130-202ENST00000540216 DDX58O95786 925 aaKnown RBP17.22■□□□□ 0.35
CCDC130-202ENST00000540216 EXOSC9Q06265 439 aaKnown RBP17.22■□□□□ 0.35
CCDC130-202ENST00000540216 CNKSR1Q969H4 720 aa17.22■□□□□ 0.35
CCDC130-202ENST00000540216 MASTLQ96GX5 879 aa17.22■□□□□ 0.35
CCDC130-202ENST00000540216 UTP14AQ9BVJ6 771 aaKnown RBP17.22■□□□□ 0.35
CCDC130-202ENST00000540216 SPINK5Q9NQ38 1064 aaPredicted RBP17.22■□□□□ 0.35
CCDC130-202ENST00000540216 ABCC12Q96J65 1359 aa17.22■□□□□ 0.35
CCDC130-202ENST00000540216 NLRP10Q86W26 655 aa17.21■□□□□ 0.35
CCDC130-202ENST00000540216 ZNF622Q969S3 477 aaKnown RBP eCLIP17.21■□□□□ 0.353e-7■□□□□ 8.4
CCDC130-202ENST00000540216 PHAXQ9H814 394 aaKnown RBP17.21■□□□□ 0.35
CCDC130-202ENST00000540216 GOLGB1Q14789 3259 aaKnown RBP17.21■□□□□ 0.35
CCDC130-202ENST00000540216 CACNA1FO60840 1977 aa17.2■□□□□ 0.34
CCDC130-202ENST00000540216 E9PSI1 815 aa17.2■□□□□ 0.34
CCDC130-202ENST00000540216 VAMP4O75379 141 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms