RNA–Protein interactions for RNA: ENST00000538039.5

CLPB-209, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLPB, Length 3,078 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-209ENST00000538039 PKNOX2Q96KN3 472 aa16.97■□□□□ 0.31
CLPB-209ENST00000538039 F13A1P00488 732 aa16.97■□□□□ 0.31
CLPB-209ENST00000538039 PRPF40BQ6NWY9 871 aaKnown RBP16.97■□□□□ 0.31
CLPB-209ENST00000538039 TCEANC2Q96MN5 208 aa16.97■□□□□ 0.31
CLPB-209ENST00000538039 LIMCH1Q9UPQ0 1083 aa16.96■□□□□ 0.31
CLPB-209ENST00000538039 DIP2AQ14689 1571 aa16.96■□□□□ 0.31
CLPB-209ENST00000538039 GJB2P29033 226 aa16.96■□□□□ 0.31
CLPB-209ENST00000538039 MTMR6Q9Y217 621 aa16.96■□□□□ 0.31
CLPB-209ENST00000538039 ME3Q16798 604 aa16.95■□□□□ 0.3
CLPB-209ENST00000538039 MCM5P33992 734 aa16.95■□□□□ 0.3
CLPB-209ENST00000538039 CCDC183Q5T5S1 534 aa16.95■□□□□ 0.3
CLPB-209ENST00000538039 ABTB2Q8N961 1025 aa16.95■□□□□ 0.3
CLPB-209ENST00000538039 KIF1BPQ96EK5 621 aa16.95■□□□□ 0.3
CLPB-209ENST00000538039 FAM227BQ96M60 508 aa16.95■□□□□ 0.3
CLPB-209ENST00000538039 RAB11FIP3O75154 756 aa16.95■□□□□ 0.3
CLPB-209ENST00000538039 CWF19L2Q2TBE0 894 aaKnown RBP16.95■□□□□ 0.3
CLPB-209ENST00000538039 LRRC59Q96AG4 307 aaKnown RBP16.95■□□□□ 0.3
CLPB-209ENST00000538039 DNAAF4Q8WXU2 420 aa16.94■□□□□ 0.3
CLPB-209ENST00000538039 JAKMIP1Q96N16 626 aaKnown RBP16.94■□□□□ 0.3
CLPB-209ENST00000538039 KCNF1Q9H3M0 494 aa16.94■□□□□ 0.3
CLPB-209ENST00000538039 CHMP3Q9Y3E7 222 aa16.94■□□□□ 0.3
CLPB-209ENST00000538039 PXDNLA1KZ92 1463 aa16.94■□□□□ 0.3
CLPB-209ENST00000538039 CRYBG1Q9Y4K1 1723 aa16.94■□□□□ 0.3
CLPB-209ENST00000538039 CHGBP05060 677 aa16.94■□□□□ 0.3
CLPB-209ENST00000538039 ZNF710Q8N1W2 664 aa16.94■□□□□ 0.3
CLPB-209ENST00000538039 TLR7Q9NYK1 1049 aaKnown RBP16.94■□□□□ 0.3
CLPB-209ENST00000538039 SASS6Q6UVJ0 657 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 MPRIPQ6WCQ1 1025 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 TPCN1Q9ULQ1 816 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 CEMIPQ8WUJ3 1361 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 KIAA2012Q0VF49 1180 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 KAZALD1Q96I82 304 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 SMC3Q9UQE7 1217 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 RGPD2P0DJD1 1756 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 PLCB2Q00722 1185 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 C14orf37Q86TY3 774 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 FERMT3Q86UX7 667 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 CNTROBQ8N137 903 aa16.93■□□□□ 0.3
CLPB-209ENST00000538039 UBE2HP62256 183 aa16.92■□□□□ 0.3
CLPB-209ENST00000538039 NOLC1Q14978 699 aaKnown RBP eCLIP16.92■□□□□ 0.3
CLPB-209ENST00000538039 SYAP1Q96A49 352 aaPredicted RBP16.92■□□□□ 0.3
CLPB-209ENST00000538039 KCNA6P17658 529 aa16.92■□□□□ 0.3
CLPB-209ENST00000538039 PYCARDQ9ULZ3 195 aa16.92■□□□□ 0.3
CLPB-209ENST00000538039 KDM4AO75164 1064 aa16.91■□□□□ 0.3
CLPB-209ENST00000538039 KLHDC4Q8TBB5 520 aa16.91■□□□□ 0.3
CLPB-209ENST00000538039 NECTIN1Q15223 517 aa16.91■□□□□ 0.3
CLPB-209ENST00000538039 CSPP1Q1MSJ5 1256 aa16.91■□□□□ 0.3
CLPB-209ENST00000538039 PDRG1Q9NUG6 133 aa16.91■□□□□ 0.3
CLPB-209ENST00000538039 PODXL2Q9NZ53 605 aa16.91■□□□□ 0.3
CLPB-209ENST00000538039 PIBF1Q8WXW3 757 aa16.9■□□□□ 0.3
CLPB-209ENST00000538039 CDC37L1Q7L3B6 337 aa16.9■□□□□ 0.3
CLPB-209ENST00000538039 ZSWIM6Q9HCJ5 1215 aa16.9■□□□□ 0.3
CLPB-209ENST00000538039 USP42Q9H9J4 1324 aaKnown RBP16.9■□□□□ 0.3
CLPB-209ENST00000538039 SASH1O94885 1247 aa16.9■□□□□ 0.3
CLPB-209ENST00000538039 LIG1P18858 919 aa16.9■□□□□ 0.3
CLPB-209ENST00000538039 CAMK4Q16566 473 aa16.9■□□□□ 0.3
CLPB-209ENST00000538039 TTC6Q86TZ1 520 aa16.9■□□□□ 0.3
CLPB-209ENST00000538039 SPC24Q8NBT2 197 aa16.9■□□□□ 0.3
CLPB-209ENST00000538039 EDC3Q96F86 508 aaKnown RBP16.9■□□□□ 0.3
CLPB-209ENST00000538039 CCDC8Q9H0W5 538 aaPredicted RBP16.9■□□□□ 0.3
CLPB-209ENST00000538039 MAP3K2Q9Y2U5 619 aa16.9■□□□□ 0.3
CLPB-209ENST00000538039 VPS37CA5D8V6 355 aaPredicted RBP16.89■□□□□ 0.29
CLPB-209ENST00000538039 DYNC1I1O14576 645 aa16.89■□□□□ 0.29
CLPB-209ENST00000538039 OS9Q13438 667 aaPredicted RBP16.89■□□□□ 0.29
CLPB-209ENST00000538039 EAF2Q96CJ1 260 aaPredicted RBP16.89■□□□□ 0.29
CLPB-209ENST00000538039 DIAPH3Q9NSV4 1193 aa16.88■□□□□ 0.29
CLPB-209ENST00000538039 NDUFB9Q9Y6M9 179 aa16.88■□□□□ 0.29
CLPB-209ENST00000538039 DNTTIP2Q5QJE6 756 aaKnown RBP16.88■□□□□ 0.29
CLPB-209ENST00000538039 A0A0D9SFI3 127 aa16.88■□□□□ 0.29
CLPB-209ENST00000538039 PHF14O94880 888 aa16.88■□□□□ 0.29
CLPB-209ENST00000538039 NMIQ13287 307 aaPredicted RBP16.88■□□□□ 0.29
CLPB-209ENST00000538039 UVSSAQ2YD98 709 aa16.88■□□□□ 0.29
CLPB-209ENST00000538039 PRDM10Q9NQV6 1147 aa16.88■□□□□ 0.29
CLPB-209ENST00000538039 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.88■□□□□ 0.29
CLPB-209ENST00000538039 RBM8AQ9Y5S9 174 aaKnown RBP16.88■□□□□ 0.29
CLPB-209ENST00000538039 EPB41L2O43491 1005 aaKnown RBP16.87■□□□□ 0.29
CLPB-209ENST00000538039 MYRIPQ8NFW9 859 aa16.87■□□□□ 0.29
CLPB-209ENST00000538039 KCNB2Q92953 911 aa16.87■□□□□ 0.29
CLPB-209ENST00000538039 BTBD11A6QL63 1104 aa16.87■□□□□ 0.29
CLPB-209ENST00000538039 GLRX3O76003 335 aaKnown RBP16.87■□□□□ 0.29
CLPB-209ENST00000538039 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
CLPB-209ENST00000538039 CREB3L3Q68CJ9 461 aa16.87■□□□□ 0.29
CLPB-209ENST00000538039 AACSQ86V21 672 aa16.87■□□□□ 0.29
CLPB-209ENST00000538039 SUCLG2Q96I99 432 aa16.87■□□□□ 0.29
CLPB-209ENST00000538039 PXDNQ92626 1479 aa16.87■□□□□ 0.29
CLPB-209ENST00000538039 LTN1O94822 1766 aa16.87■□□□□ 0.29
CLPB-209ENST00000538039 KDM3BQ7LBC6 1761 aa16.86■□□□□ 0.29
CLPB-209ENST00000538039 MED1Q15648 1581 aaPredicted RBP16.86■□□□□ 0.29
CLPB-209ENST00000538039 ZNF589Q86UQ0 364 aaPredicted RBP16.86■□□□□ 0.29
CLPB-209ENST00000538039 ECHDC1Q9NTX5 307 aa16.86■□□□□ 0.29
CLPB-209ENST00000538039 TFIP11Q9UBB9 837 aaKnown RBP16.86■□□□□ 0.29
CLPB-209ENST00000538039 PRDM4Q9UKN5 801 aa16.86■□□□□ 0.29
CLPB-209ENST00000538039 SIL1Q9H173 461 aa16.86■□□□□ 0.29
CLPB-209ENST00000538039 TBX22Q9Y458 520 aa16.86■□□□□ 0.29
CLPB-209ENST00000538039 FAM184AQ8NB25 1140 aa16.85■□□□□ 0.29
CLPB-209ENST00000538039 CCDC171Q6TFL3 1326 aa16.85■□□□□ 0.29
CLPB-209ENST00000538039 COL15A1P39059 1388 aa16.85■□□□□ 0.29
CLPB-209ENST00000538039 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
CLPB-209ENST00000538039 TTC41PQ6P2S7 1318 aa16.85■□□□□ 0.29
CLPB-209ENST00000538039 SLC27A2O14975 620 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms