RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 SENP3-EIF4A1A0A087X0R7 540 aa20.01■□□□□ 0.79
CPSF1-210ENST00000532935 GNAI1P63096 354 aa20.01■□□□□ 0.79
CPSF1-210ENST00000532935 CHRNA5P30532 468 aa20■□□□□ 0.79
CPSF1-210ENST00000532935 PDIA6Q15084 440 aa20■□□□□ 0.79
CPSF1-210ENST00000532935 HLFQ16534 295 aa20■□□□□ 0.79
CPSF1-210ENST00000532935 CCDC27Q2M243 656 aa20■□□□□ 0.79
CPSF1-210ENST00000532935 KIF6Q6ZMV9 814 aa20■□□□□ 0.79
CPSF1-210ENST00000532935 TTLL7Q6ZT98 887 aa20■□□□□ 0.79
CPSF1-210ENST00000532935 NECTIN2Q92692 538 aa20■□□□□ 0.79
CPSF1-210ENST00000532935 MAP3K15Q6ZN16 1313 aa20■□□□□ 0.79
CPSF1-210ENST00000532935 ERVV-1B6SEH8 477 aa19.99■□□□□ 0.79
CPSF1-210ENST00000532935 HOXB7P09629 217 aa19.99■□□□□ 0.79
CPSF1-210ENST00000532935 PROSER3Q2NL68 480 aa19.99■□□□□ 0.79
CPSF1-210ENST00000532935 PRR5LQ6MZQ0 368 aa19.99■□□□□ 0.79
CPSF1-210ENST00000532935 LRP10Q7Z4F1 713 aa19.99■□□□□ 0.79
CPSF1-210ENST00000532935 BCS1LQ9Y276 419 aa19.99■□□□□ 0.79
CPSF1-210ENST00000532935 COL11A2P13942 1736 aaPredicted RBP19.99■□□□□ 0.79
CPSF1-210ENST00000532935 ANXA1P04083 346 aa19.98■□□□□ 0.79
CPSF1-210ENST00000532935 NCBP3Q53F19 620 aaKnown RBP19.98■□□□□ 0.79
CPSF1-210ENST00000532935 WWC1Q8IX03 1113 aa19.98■□□□□ 0.79
CPSF1-210ENST00000532935 FAM9BQ8IZU0 186 aa19.98■□□□□ 0.79
CPSF1-210ENST00000532935 PIM2Q9P1W9 311 aa19.98■□□□□ 0.79
CPSF1-210ENST00000532935 NIP7Q9Y221 180 aaKnown RBP eCLIP19.98■□□□□ 0.79
CPSF1-210ENST00000532935 ANKRD36CQ5JPF3 1778 aa19.98■□□□□ 0.79
CPSF1-210ENST00000532935 DUSP27Q5VZP5 1158 aa19.97■□□□□ 0.79
CPSF1-210ENST00000532935 CNBD1Q8NA66 436 aa19.97■□□□□ 0.79
CPSF1-210ENST00000532935 CACNA1SQ13698 1873 aa19.96■□□□□ 0.79
CPSF1-210ENST00000532935 NPHP1O15259 732 aa19.96■□□□□ 0.79
CPSF1-210ENST00000532935 HDGFL1Q5TGJ6 251 aa19.96■□□□□ 0.79
CPSF1-210ENST00000532935 NBPF5PQ86XG9 351 aaPredicted RBP19.96■□□□□ 0.79
CPSF1-210ENST00000532935 CCDC24Q8N4L8 307 aa19.96■□□□□ 0.79
CPSF1-210ENST00000532935 BRIP1Q9BX63 1249 aa19.96■□□□□ 0.79
CPSF1-210ENST00000532935 ZBTB3Q9H5J0 574 aa19.96■□□□□ 0.79
CPSF1-210ENST00000532935 DDX21Q9NR30 783 aaKnown RBP eCLIP19.96■□□□□ 0.79
CPSF1-210ENST00000532935 ATP10DQ9P241 1426 aa19.95■□□□□ 0.78
CPSF1-210ENST00000532935 ST5P78524 1137 aa19.95■□□□□ 0.78
CPSF1-210ENST00000532935 DALRD3Q5D0E6 543 aaKnown RBP19.95■□□□□ 0.78
CPSF1-210ENST00000532935 C2CD5Q86YS7 1000 aa19.95■□□□□ 0.78
CPSF1-210ENST00000532935 PDE6BP35913 854 aa19.94■□□□□ 0.78
CPSF1-210ENST00000532935 CHPF2Q9P2E5 772 aa19.94■□□□□ 0.78
CPSF1-210ENST00000532935 H0YIN7 160 aa19.93■□□□□ 0.78
CPSF1-210ENST00000532935 COPS6Q7L5N1 327 aa19.93■□□□□ 0.78
CPSF1-210ENST00000532935 PDZRN3Q9UPQ7 1066 aa19.93■□□□□ 0.78
CPSF1-210ENST00000532935 SALL2Q9Y467 1007 aaPredicted RBP19.93■□□□□ 0.78
CPSF1-210ENST00000532935 FAM177BA6PVY3 158 aa19.92■□□□□ 0.78
CPSF1-210ENST00000532935 TPTE2Q6XPS3 522 aa19.92■□□□□ 0.78
CPSF1-210ENST00000532935 GIGYF2Q6Y7W6 1299 aaKnown RBP19.92■□□□□ 0.78
CPSF1-210ENST00000532935 XAGE3Q8WTP9 111 aa19.92■□□□□ 0.78
CPSF1-210ENST00000532935 IL16Q14005 1332 aa19.92■□□□□ 0.78
CPSF1-210ENST00000532935 ARFGEF2Q9Y6D5 1785 aa19.92■□□□□ 0.78
CPSF1-210ENST00000532935 ELL2O00472 640 aaPredicted RBP19.91■□□□□ 0.78
CPSF1-210ENST00000532935 AIMP1Q12904 312 aaKnown RBP19.91■□□□□ 0.78
CPSF1-210ENST00000532935 C8orf58Q8NAV2 365 aa19.91■□□□□ 0.78
CPSF1-210ENST00000532935 TSR2Q969E8 191 aaKnown RBP19.91■□□□□ 0.78
CPSF1-210ENST00000532935 DBF4Q9UBU7 674 aaPredicted RBP19.91■□□□□ 0.78
CPSF1-210ENST00000532935 GPTP24298 496 aa19.9■□□□□ 0.78
CPSF1-210ENST00000532935 ARHGAP27Q6ZUM4 889 aa19.9■□□□□ 0.78
CPSF1-210ENST00000532935 ZNF34Q8IZ26 560 aa19.9■□□□□ 0.78
CPSF1-210ENST00000532935 TTLL6Q8N841 843 aa19.9■□□□□ 0.78
CPSF1-210ENST00000532935 UBN2Q6ZU65 1347 aa19.9■□□□□ 0.78
CPSF1-210ENST00000532935 TNRC6CQ9HCJ0 1690 aaKnown RBP19.9■□□□□ 0.78
CPSF1-210ENST00000532935 SBF1O95248 1867 aa19.9■□□□□ 0.78
CPSF1-210ENST00000532935 ZNF784Q8NCA9 323 aaPredicted RBP19.89■□□□□ 0.77
CPSF1-210ENST00000532935 ZNF622Q969S3 477 aaKnown RBP eCLIP19.89■□□□□ 0.77
CPSF1-210ENST00000532935 NYXQ9GZU5 481 aa19.89■□□□□ 0.77
CPSF1-210ENST00000532935 SLX4Q8IY92 1834 aa19.88■□□□□ 0.77
CPSF1-210ENST00000532935 IBTKQ9P2D0 1353 aaPredicted RBP19.88■□□□□ 0.77
CPSF1-210ENST00000532935 WDR63Q8IWG1 891 aa19.88■□□□□ 0.77
CPSF1-210ENST00000532935 HYPKQ9NX55 129 aa19.88■□□□□ 0.77
CPSF1-210ENST00000532935 SRGNP10124 158 aa19.87■□□□□ 0.77
CPSF1-210ENST00000532935 GTF2E1P29083 439 aaPredicted RBP19.87■□□□□ 0.77
CPSF1-210ENST00000532935 SUSD4Q5VX71 490 aa19.87■□□□□ 0.77
CPSF1-210ENST00000532935 TSPYL6Q8N831 410 aa19.87■□□□□ 0.77
CPSF1-210ENST00000532935 CCDC88AQ3V6T2 1871 aa19.87■□□□□ 0.77
CPSF1-210ENST00000532935 CACNA1FO60840 1977 aa19.86■□□□□ 0.77
CPSF1-210ENST00000532935 PARP10Q53GL7 1025 aa19.86■□□□□ 0.77
CPSF1-210ENST00000532935 HSP90AB3PQ58FF7 597 aa19.86■□□□□ 0.77
CPSF1-210ENST00000532935 NUTM1Q86Y26 1132 aa19.86■□□□□ 0.77
CPSF1-210ENST00000532935 CHMP4AQ9BY43 222 aa19.86■□□□□ 0.77
CPSF1-210ENST00000532935 ADCY9O60503 1353 aa19.85■□□□□ 0.77
CPSF1-210ENST00000532935 ABCC12Q96J65 1359 aa19.85■□□□□ 0.77
CPSF1-210ENST00000532935 KLRG2A4D1S0 409 aaPredicted RBP19.85■□□□□ 0.77
CPSF1-210ENST00000532935 CCER2I3L3R5 266 aa19.85■□□□□ 0.77
CPSF1-210ENST00000532935 STYK1Q6J9G0 422 aa19.85■□□□□ 0.77
CPSF1-210ENST00000532935 PPP1R42Q7Z4L9 355 aa19.85■□□□□ 0.77
CPSF1-210ENST00000532935 PLBD2Q8NHP8 589 aa19.85■□□□□ 0.77
CPSF1-210ENST00000532935 MASTLQ96GX5 879 aa19.85■□□□□ 0.77
CPSF1-210ENST00000532935 FER1L6Q2WGJ9 1857 aa19.84■□□□□ 0.77
CPSF1-210ENST00000532935 FANCIQ9NVI1 1328 aa19.84■□□□□ 0.77
CPSF1-210ENST00000532935 NTSR2O95665 410 aa19.84■□□□□ 0.77
CPSF1-210ENST00000532935 TCIRG1Q13488 830 aa19.84■□□□□ 0.77
CPSF1-210ENST00000532935 ERFEQ4G0M1 354 aa19.84■□□□□ 0.77
CPSF1-210ENST00000532935 CCDC30Q5VVM6 783 aa19.84■□□□□ 0.77
CPSF1-210ENST00000532935 ANKRD13DQ6ZTN6 518 aa19.84■□□□□ 0.77
CPSF1-210ENST00000532935 CNKSR1Q969H4 720 aa19.84■□□□□ 0.77
CPSF1-210ENST00000532935 RIC1Q4ADV7 1423 aa19.84■□□□□ 0.77
CPSF1-210ENST00000532935 TWISTNBQ3B726 338 aaPredicted RBP19.83■□□□□ 0.77
CPSF1-210ENST00000532935 LAMB2P55268 1798 aa19.83■□□□□ 0.76
CPSF1-210ENST00000532935 NPR1P16066 1061 aa19.82■□□□□ 0.76
CPSF1-210ENST00000532935 UTP14AQ9BVJ6 771 aaKnown RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms