RNA–Protein interactions for RNA: ENST00000521932.1

VPS13B-210, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 1,055 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-210ENST00000521932 SWT1Q5T5J6 900 aaKnown RBP11.14□□□□□ -0.63
VPS13B-210ENST00000521932 IFFO2Q5TF58 517 aa11.14□□□□□ -0.63
VPS13B-210ENST00000521932 SULT6B1Q6IMI4 303 aa11.14□□□□□ -0.63
VPS13B-210ENST00000521932 RGPD2P0DJD1 1756 aa11.13□□□□□ -0.63
VPS13B-210ENST00000521932 U2SURPO15042 1029 aaKnown RBP11.13□□□□□ -0.63
VPS13B-210ENST00000521932 NYAP1Q6ZVC0 841 aa11.13□□□□□ -0.63
VPS13B-210ENST00000521932 SEPT12Q8IYM1 358 aa11.13□□□□□ -0.63
VPS13B-210ENST00000521932 RAPGEF4Q8WZA2 1011 aa11.13□□□□□ -0.63
VPS13B-210ENST00000521932 CCER2I3L3R5 266 aa11.12□□□□□ -0.63
VPS13B-210ENST00000521932 EXOC5O00471 708 aa11.12□□□□□ -0.63
VPS13B-210ENST00000521932 HMOX1P09601 288 aa11.12□□□□□ -0.63
VPS13B-210ENST00000521932 U2AF1L5P0DN76 240 aaPredicted RBP11.12□□□□□ -0.63
VPS13B-210ENST00000521932 FECHP22830 423 aa11.12□□□□□ -0.63
VPS13B-210ENST00000521932 U2AF1Q01081 240 aaKnown RBP eCLIP11.12□□□□□ -0.636e-6■■■■□ 22.1
VPS13B-210ENST00000521932 AEBP1Q8IUX7 1158 aa11.12□□□□□ -0.63
VPS13B-210ENST00000521932 PNISRQ8TF01 805 aaKnown RBP11.12□□□□□ -0.63
VPS13B-210ENST00000521932 THSD7AQ9UPZ6 1657 aa11.11□□□□□ -0.63
VPS13B-210ENST00000521932 OVOS2A0A0G2JMS6 1433 aa11.11□□□□□ -0.63
VPS13B-210ENST00000521932 TATP17735 454 aaPredicted RBP11.11□□□□□ -0.63
VPS13B-210ENST00000521932 PPP4CP60510 307 aa11.11□□□□□ -0.63
VPS13B-210ENST00000521932 DDB1Q16531 1140 aa11.11□□□□□ -0.63
VPS13B-210ENST00000521932 RSPH6AQ9H0K4 717 aa11.11□□□□□ -0.63
VPS13B-210ENST00000521932 MRS2Q9HD23 443 aa11.11□□□□□ -0.63
VPS13B-210ENST00000521932 MEGF6O75095 1541 aa11.1□□□□□ -0.63
VPS13B-210ENST00000521932 AMOTQ4VCS5 1084 aa11.1□□□□□ -0.63
VPS13B-210ENST00000521932 ZCRB1Q8TBF4 217 aaKnown RBP11.1□□□□□ -0.63
VPS13B-210ENST00000521932 PLEKHF1Q96S99 279 aa11.1□□□□□ -0.63
VPS13B-210ENST00000521932 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
VPS13B-210ENST00000521932 ADAMTS8Q9UP79 889 aa11.1□□□□□ -0.63
VPS13B-210ENST00000521932 RGS12O14924 1447 aa11.09□□□□□ -0.63
VPS13B-210ENST00000521932 PARP4Q9UKK3 1724 aaKnown RBP11.09□□□□□ -0.63
VPS13B-210ENST00000521932 SMYD5Q6GMV2 418 aa11.09□□□□□ -0.63
VPS13B-210ENST00000521932 SPG7Q9UQ90 795 aa11.09□□□□□ -0.63
VPS13B-210ENST00000521932 WNK3Q9BYP7 1800 aa11.08□□□□□ -0.64
VPS13B-210ENST00000521932 A0A0G2JS52 829 aa11.08□□□□□ -0.64
VPS13B-210ENST00000521932 RNF40O75150 1001 aa11.08□□□□□ -0.64
VPS13B-210ENST00000521932 PRKAR2BP31323 418 aa11.08□□□□□ -0.64
VPS13B-210ENST00000521932 APLP1P51693 650 aa11.08□□□□□ -0.64
VPS13B-210ENST00000521932 MYT1Q01538 1121 aa11.08□□□□□ -0.64
VPS13B-210ENST00000521932 PDE3BQ13370 1112 aa11.08□□□□□ -0.64
VPS13B-210ENST00000521932 WDR43Q15061 677 aaKnown RBP eCLIP11.08□□□□□ -0.64
VPS13B-210ENST00000521932 PLEKHO1Q53GL0 409 aaPredicted RBP11.08□□□□□ -0.64
VPS13B-210ENST00000521932 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.08□□□□□ -0.64
VPS13B-210ENST00000521932 KRT27Q7Z3Y8 459 aa11.08□□□□□ -0.64
VPS13B-210ENST00000521932 TNS2Q63HR2 1409 aa11.08□□□□□ -0.64
VPS13B-210ENST00000521932 CYP27B1O15528 508 aa11.07□□□□□ -0.64
VPS13B-210ENST00000521932 HIC1Q14526 733 aa11.07□□□□□ -0.64
VPS13B-210ENST00000521932 MARCH10Q8NA82 808 aaPredicted RBP11.07□□□□□ -0.64
VPS13B-210ENST00000521932 PHACTR3Q96KR7 559 aa11.07□□□□□ -0.64
VPS13B-210ENST00000521932 LRRC37A3O60309 1634 aa11.06□□□□□ -0.64
VPS13B-210ENST00000521932 RCCD1A6NED2 376 aa11.06□□□□□ -0.64
VPS13B-210ENST00000521932 MTHFSDQ2M296 383 aaKnown RBP11.06□□□□□ -0.64
VPS13B-210ENST00000521932 BCL9O00512 1426 aa11.06□□□□□ -0.64
VPS13B-210ENST00000521932 PCDH11XQ9BZA7 1347 aa11.06□□□□□ -0.64
VPS13B-210ENST00000521932 PCDH11YQ9BZA8 1340 aa11.06□□□□□ -0.64
VPS13B-210ENST00000521932 TULP1O00294 542 aaPredicted RBP11.05□□□□□ -0.64
VPS13B-210ENST00000521932 PHKG2P15735 406 aa11.05□□□□□ -0.64
VPS13B-210ENST00000521932 TJAP1Q5JTD0 557 aa11.05□□□□□ -0.64
VPS13B-210ENST00000521932 ILDR2Q71H61 639 aa11.05□□□□□ -0.64
VPS13B-210ENST00000521932 PKD1L3Q7Z443 1732 aa11.05□□□□□ -0.64
VPS13B-210ENST00000521932 IFNL2Q8IZJ0 200 aa11.05□□□□□ -0.64
VPS13B-210ENST00000521932 RBM46Q8TBY0 533 aaKnown RBP11.05□□□□□ -0.64
VPS13B-210ENST00000521932 DDX54Q8TDD1 881 aaKnown RBP11.05□□□□□ -0.64
VPS13B-210ENST00000521932 TMEM134Q9H6X4 195 aa11.05□□□□□ -0.64
VPS13B-210ENST00000521932 GNPATO15228 680 aa11.04□□□□□ -0.64
VPS13B-210ENST00000521932 NEFMP07197 916 aa11.04□□□□□ -0.64
VPS13B-210ENST00000521932 DNAJB2P25686 324 aa11.04□□□□□ -0.64
VPS13B-210ENST00000521932 AKAP4Q5JQC9 854 aa11.04□□□□□ -0.64
VPS13B-210ENST00000521932 FAM196AQ6ZSG2 479 aa11.04□□□□□ -0.64
VPS13B-210ENST00000521932 GAS2L2Q8NHY3 880 aa11.04□□□□□ -0.64
VPS13B-210ENST00000521932 PXYLP1Q8TE99 480 aa11.04□□□□□ -0.64
VPS13B-210ENST00000521932 RUNDC1Q96C34 613 aa11.04□□□□□ -0.64
VPS13B-210ENST00000521932 EP400Q96L91 3159 aa11.04□□□□□ -0.64
VPS13B-210ENST00000521932 BRWD3Q6RI45 1802 aa11.04□□□□□ -0.64
VPS13B-210ENST00000521932 HSP90AB1P08238 724 aaKnown RBP11.03□□□□□ -0.64
VPS13B-210ENST00000521932 FAM182BQ5T319 152 aa11.03□□□□□ -0.64
VPS13B-210ENST00000521932 ZNF530Q6P9A1 599 aaPredicted RBP11.03□□□□□ -0.64
VPS13B-210ENST00000521932 DCAF5Q96JK2 942 aa11.03□□□□□ -0.64
VPS13B-210ENST00000521932 SHANK3Q9BYB0 1731 aa11.03□□□□□ -0.64
VPS13B-210ENST00000521932 HTATSF1O43719 755 aaKnown RBP11.02□□□□□ -0.65
VPS13B-210ENST00000521932 C1orf141Q5JVX7 400 aa11.02□□□□□ -0.65
VPS13B-210ENST00000521932 METTL3Q86U44 580 aaKnown RBP11.02□□□□□ -0.65
VPS13B-210ENST00000521932 GPIHBP1Q8IV16 184 aa11.02□□□□□ -0.65
VPS13B-210ENST00000521932 SLF2Q8IX21 1173 aa11.02□□□□□ -0.65
VPS13B-210ENST00000521932 FAM9BQ8IZU0 186 aa11.02□□□□□ -0.65
VPS13B-210ENST00000521932 GNAT3A8MTJ3 354 aa11.01□□□□□ -0.65
VPS13B-210ENST00000521932 KCNC4Q03721 635 aa11.01□□□□□ -0.65
VPS13B-210ENST00000521932 NFE2L2Q16236 605 aa11.01□□□□□ -0.65
VPS13B-210ENST00000521932 CCDC146Q8IYE0 955 aa11.01□□□□□ -0.65
VPS13B-210ENST00000521932 MTRQ99707 1265 aa11.01□□□□□ -0.65
VPS13B-210ENST00000521932 MAPK8IP3Q9UPT6 1336 aa11.01□□□□□ -0.65
VPS13B-210ENST00000521932 TMPOP42166 694 aaKnown RBP11□□□□□ -0.65
VPS13B-210ENST00000521932 ERVV-2B6SEH9 535 aa10.99□□□□□ -0.65
VPS13B-210ENST00000521932 APAF1O14727 1248 aa10.99□□□□□ -0.65
VPS13B-210ENST00000521932 RNMTO43148 476 aaKnown RBP10.99□□□□□ -0.65
VPS13B-210ENST00000521932 RIPK4P57078 832 aa10.99□□□□□ -0.65
VPS13B-210ENST00000521932 MPRIPQ6WCQ1 1025 aa10.99□□□□□ -0.65
VPS13B-210ENST00000521932 IL17REQ8NFR9 667 aa10.99□□□□□ -0.65
VPS13B-210ENST00000521932 NLRP7Q8WX94 980 aa10.99□□□□□ -0.65
VPS13B-210ENST00000521932 ZNF516Q92618 1163 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms