RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 H0YGN5 161 aa12.65□□□□□ -0.38
PVT1-210ENST00000521122 CRKLP46109 303 aaKnown RBP12.65□□□□□ -0.38
PVT1-210ENST00000521122 INTS3Q68E01 1043 aaKnown RBP12.65□□□□□ -0.38
PVT1-210ENST00000521122 TTC28Q96AY4 2481 aa12.65□□□□□ -0.38
PVT1-210ENST00000521122 COL11A2P13942 1736 aaPredicted RBP12.65□□□□□ -0.38
PVT1-210ENST00000521122 ANKRD31Q8N7Z5 1873 aa12.64□□□□□ -0.39
PVT1-210ENST00000521122 EPS15P42566 896 aa12.64□□□□□ -0.39
PVT1-210ENST00000521122 HUNKP57058 714 aa12.64□□□□□ -0.39
PVT1-210ENST00000521122 ZNF277Q9NRM2 450 aaPredicted RBP12.64□□□□□ -0.39
PVT1-210ENST00000521122 PAPPA2Q9BXP8 1791 aa12.64□□□□□ -0.39
PVT1-210ENST00000521122 PDE6BP35913 854 aa12.63□□□□□ -0.39
PVT1-210ENST00000521122 PLA2G5P39877 138 aa12.63□□□□□ -0.39
PVT1-210ENST00000521122 SCNN1DP51172 638 aa12.63□□□□□ -0.39
PVT1-210ENST00000521122 FKBP4Q02790 459 aaKnown RBP eCLIP12.63□□□□□ -0.39
PVT1-210ENST00000521122 RGMBQ6NW40 437 aa12.63□□□□□ -0.39
PVT1-210ENST00000521122 PRPF40BQ6NWY9 871 aaKnown RBP12.63□□□□□ -0.39
PVT1-210ENST00000521122 ZNF296Q8WUU4 475 aaPredicted RBP12.63□□□□□ -0.39
PVT1-210ENST00000521122 CNKSR1Q969H4 720 aa12.63□□□□□ -0.39
PVT1-210ENST00000521122 ZNF408Q9H9D4 720 aa12.63□□□□□ -0.39
PVT1-210ENST00000521122 RTL1A6NKG5 1358 aa12.62□□□□□ -0.39
PVT1-210ENST00000521122 CCDC102AQ96A19 550 aa12.62□□□□□ -0.39
PVT1-210ENST00000521122 CSRNP1Q96S65 589 aa12.62□□□□□ -0.39
PVT1-210ENST00000521122 BRIP1Q9BX63 1249 aa12.62□□□□□ -0.39
PVT1-210ENST00000521122 CACNA1SQ13698 1873 aa12.61□□□□□ -0.39
PVT1-210ENST00000521122 BCORQ6W2J9 1755 aa12.61□□□□□ -0.39
PVT1-210ENST00000521122 ARFGEF2Q9Y6D5 1785 aa12.61□□□□□ -0.39
PVT1-210ENST00000521122 CCDC93Q567U6 631 aa12.61□□□□□ -0.39
PVT1-210ENST00000521122 GLIS2Q9BZE0 524 aaPredicted RBP12.61□□□□□ -0.39
PVT1-210ENST00000521122 MUC3AQ02505 3323 aa12.6□□□□□ -0.39
PVT1-210ENST00000521122 C7orf43Q8WVR3 580 aa12.6□□□□□ -0.39
PVT1-210ENST00000521122 GJA3Q9Y6H8 435 aa12.6□□□□□ -0.39
PVT1-210ENST00000521122 EN2P19622 333 aaPredicted RBP12.59□□□□□ -0.39
PVT1-210ENST00000521122 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
PVT1-210ENST00000521122 STYK1Q6J9G0 422 aa12.59□□□□□ -0.39
PVT1-210ENST00000521122 SPG7Q9UQ90 795 aa12.59□□□□□ -0.39
PVT1-210ENST00000521122 EDC4Q6P2E9 1401 aaKnown RBP12.59□□□□□ -0.39
PVT1-210ENST00000521122 IARSP41252 1262 aaKnown RBP12.58□□□□□ -0.4
PVT1-210ENST00000521122 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.58□□□□□ -0.4
PVT1-210ENST00000521122 REM2Q8IYK8 340 aaPredicted RBP12.58□□□□□ -0.4
PVT1-210ENST00000521122 NARFQ9UHQ1 456 aa12.58□□□□□ -0.4
PVT1-210ENST00000521122 ERBB4Q15303 1308 aa12.58□□□□□ -0.4
PVT1-210ENST00000521122 FBLN1P23142 703 aa12.57□□□□□ -0.4
PVT1-210ENST00000521122 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
PVT1-210ENST00000521122 INTS5Q6P9B9 1019 aaKnown RBP12.57□□□□□ -0.4
PVT1-210ENST00000521122 FAM122AQ96E09 287 aa12.57□□□□□ -0.4
PVT1-210ENST00000521122 PRO3102Q9H379 93 aa12.57□□□□□ -0.4
PVT1-210ENST00000521122 BCL2L12Q9HB09 334 aa12.57□□□□□ -0.4
PVT1-210ENST00000521122 ADARB2Q9NS39 739 aaKnown RBP12.57□□□□□ -0.4
PVT1-210ENST00000521122 PGAP2Q9UHJ9 254 aa12.57□□□□□ -0.4
PVT1-210ENST00000521122 STXBP5LQ9Y2K9 1186 aa12.57□□□□□ -0.4
PVT1-210ENST00000521122 ZNF157P51786 506 aaPredicted RBP12.56□□□□□ -0.4
PVT1-210ENST00000521122 NOM1Q5C9Z4 860 aaKnown RBP12.56□□□□□ -0.4
PVT1-210ENST00000521122 CCDC24Q8N4L8 307 aa12.56□□□□□ -0.4
PVT1-210ENST00000521122 JDP2Q8WYK2 163 aa12.56□□□□□ -0.4
PVT1-210ENST00000521122 SOX1O00570 391 aaPredicted RBP12.55□□□□□ -0.4
PVT1-210ENST00000521122 SLC10A3P09131 477 aa12.55□□□□□ -0.4
PVT1-210ENST00000521122 SRGNP10124 158 aa12.55□□□□□ -0.4
PVT1-210ENST00000521122 PHKG2P15735 406 aa12.55□□□□□ -0.4
PVT1-210ENST00000521122 ANKRD13DQ6ZTN6 518 aa12.55□□□□□ -0.4
PVT1-210ENST00000521122 CDC37L1Q7L3B6 337 aa12.55□□□□□ -0.4
PVT1-210ENST00000521122 IFNL2Q8IZJ0 200 aa12.55□□□□□ -0.4
PVT1-210ENST00000521122 MASTLQ96GX5 879 aa12.55□□□□□ -0.4
PVT1-210ENST00000521122 SOS1Q07889 1333 aaPredicted RBP12.55□□□□□ -0.4
PVT1-210ENST00000521122 PRR5LQ6MZQ0 368 aa12.54□□□□□ -0.4
PVT1-210ENST00000521122 RTKN2Q8IZC4 609 aa12.54□□□□□ -0.4
PVT1-210ENST00000521122 LRCH3Q96II8 777 aa12.54□□□□□ -0.4
PVT1-210ENST00000521122 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.54□□□□□ -0.41e-11■□□□□ 9.9
PVT1-210ENST00000521122 RAPGEFL1Q9UHV5 662 aa12.54□□□□□ -0.4
PVT1-210ENST00000521122 A0A1W2PPC1 479 aa12.53□□□□□ -0.4
PVT1-210ENST00000521122 ERVV-2B6SEH9 535 aa12.53□□□□□ -0.4
PVT1-210ENST00000521122 GPR25O00155 361 aa12.53□□□□□ -0.4
PVT1-210ENST00000521122 TBC1D8O95759 1140 aa12.53□□□□□ -0.4
PVT1-210ENST00000521122 HDGFL2Q7Z4V5 671 aaPredicted RBP12.53□□□□□ -0.4
PVT1-210ENST00000521122 ZC3H15Q8WU90 426 aaKnown RBP12.53□□□□□ -0.4
PVT1-210ENST00000521122 TJP1Q07157 1748 aa12.53□□□□□ -0.4
PVT1-210ENST00000521122 LAMB4A4D0S4 1761 aa12.52□□□□□ -0.41
PVT1-210ENST00000521122 PTCD1O75127 700 aaKnown RBP12.52□□□□□ -0.41
PVT1-210ENST00000521122 COG3Q96JB2 828 aa12.52□□□□□ -0.41
PVT1-210ENST00000521122 SNX27Q96L92 541 aa12.52□□□□□ -0.41
PVT1-210ENST00000521122 A0A1W2PP64 1363 aa12.52□□□□□ -0.41
PVT1-210ENST00000521122 COL15A1P39059 1388 aa12.52□□□□□ -0.41
PVT1-210ENST00000521122 PIEZO1Q92508 2521 aa12.51□□□□□ -0.41
PVT1-210ENST00000521122 RRS1Q15050 365 aaKnown RBP12.51□□□□□ -0.41
PVT1-210ENST00000521122 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
PVT1-210ENST00000521122 GPRC5DQ9NZD1 345 aa12.51□□□□□ -0.41
PVT1-210ENST00000521122 NCAPD2Q15021 1401 aa12.51□□□□□ -0.41
PVT1-210ENST00000521122 COL4A5P29400 1685 aa12.51□□□□□ -0.41
PVT1-210ENST00000521122 GPR153Q6NV75 609 aa12.5□□□□□ -0.41
PVT1-210ENST00000521122 OLFM4Q6UX06 510 aa12.5□□□□□ -0.41
PVT1-210ENST00000521122 C2orf69Q8N8R5 385 aa12.5□□□□□ -0.41
PVT1-210ENST00000521122 FKTNO75072 461 aa12.49□□□□□ -0.41
PVT1-210ENST00000521122 HSP90AB2PQ58FF8 381 aa12.49□□□□□ -0.41
PVT1-210ENST00000521122 DEFB123Q8N688 67 aa12.49□□□□□ -0.41
PVT1-210ENST00000521122 ARMC5Q96C12 935 aa12.49□□□□□ -0.41
PVT1-210ENST00000521122 LAMA2P24043 3122 aaKnown RBP12.48□□□□□ -0.41
PVT1-210ENST00000521122 PSMD1Q99460 953 aa12.48□□□□□ -0.41
PVT1-210ENST00000521122 EYSQ5T1H1 3165 aa12.47□□□□□ -0.41
PVT1-210ENST00000521122 TONSLQ96HA7 1378 aa12.47□□□□□ -0.41
PVT1-210ENST00000521122 HIRAP54198 1017 aaPredicted RBP12.47□□□□□ -0.41
PVT1-210ENST00000521122 USP48Q86UV5 1035 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms