RNA–Protein interactions for RNA: ENST00000516278.1

RN7SKP248-201, Transcript of RNA, 7SK small nuclear pseudogene 248, humanhuman

BASIC

Gene RN7SKP248, Length 305 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP248-201ENST00000516278 DBN1Q16643 649 aa8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 SWI5Q1ZZU3 235 aa8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 STAG2Q8N3U4 1231 aa8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 ZDHHC1Q8WTX9 485 aa8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 SCG3Q8WXD2 468 aaKnown RBP8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 GPAMQ9HCL2 828 aa8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 CUEDC1Q9NWM3 386 aaPredicted RBP8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 ZMIZ1Q9ULJ6 1067 aa8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 PARP3Q9Y6F1 533 aa8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 MAPKBP1O60336 1514 aa8.62□□□□□ -1.03
RN7SKP248-201ENST00000516278 ERBB4Q15303 1308 aa8.61□□□□□ -1.03
RN7SKP248-201ENST00000516278 C21orf2O43822 256 aa8.61□□□□□ -1.03
RN7SKP248-201ENST00000516278 IGFBP4P22692 258 aa8.61□□□□□ -1.03
RN7SKP248-201ENST00000516278 ANP32AP39687 249 aaKnown RBP8.61□□□□□ -1.03
RN7SKP248-201ENST00000516278 HIRAP54198 1017 aaPredicted RBP8.61□□□□□ -1.03
RN7SKP248-201ENST00000516278 FOXR1Q6PIV2 292 aa8.61□□□□□ -1.03
RN7SKP248-201ENST00000516278 EML1O00423 815 aa8.6□□□□□ -1.03
RN7SKP248-201ENST00000516278 WEE1P30291 646 aa8.6□□□□□ -1.03
RN7SKP248-201ENST00000516278 DDX10Q13206 875 aaKnown RBP8.6□□□□□ -1.03
RN7SKP248-201ENST00000516278 EFHC2Q5JST6 749 aa8.6□□□□□ -1.03
RN7SKP248-201ENST00000516278 POTEAQ6S8J7 498 aa8.6□□□□□ -1.03
RN7SKP248-201ENST00000516278 ZNF837Q96EG3 531 aaPredicted RBP8.6□□□□□ -1.03
RN7SKP248-201ENST00000516278 ARID3AQ99856 593 aa8.6□□□□□ -1.03
RN7SKP248-201ENST00000516278 NUCKS1Q9H1E3 243 aaKnown RBP8.6□□□□□ -1.03
RN7SKP248-201ENST00000516278 CRISPLD1Q9H336 500 aa8.6□□□□□ -1.03
RN7SKP248-201ENST00000516278 TIAM1Q13009 1591 aa8.6□□□□□ -1.03
RN7SKP248-201ENST00000516278 TONSLQ96HA7 1378 aa8.6□□□□□ -1.03
RN7SKP248-201ENST00000516278 STK32AQ8WU08 396 aa8.59□□□□□ -1.03
RN7SKP248-201ENST00000516278 C2orf49Q9BVC5 232 aaPredicted RBP8.59□□□□□ -1.03
RN7SKP248-201ENST00000516278 RUBCNLQ9H714 662 aa8.59□□□□□ -1.03
RN7SKP248-201ENST00000516278 ATP4AP20648 1035 aa8.58□□□□□ -1.04
RN7SKP248-201ENST00000516278 DEKP35659 375 aaKnown RBP8.58□□□□□ -1.04
RN7SKP248-201ENST00000516278 TXLNAP40222 546 aa8.58□□□□□ -1.04
RN7SKP248-201ENST00000516278 FAM69CQ0P6D2 419 aa8.58□□□□□ -1.04
RN7SKP248-201ENST00000516278 ARSJQ5FYB0 599 aaPredicted RBP8.58□□□□□ -1.04
RN7SKP248-201ENST00000516278 TMEM164Q5U3C3 297 aa8.58□□□□□ -1.04
RN7SKP248-201ENST00000516278 C1orf53Q5VUE5 145 aa8.58□□□□□ -1.04
RN7SKP248-201ENST00000516278 GPR161Q8N6U8 529 aaKnown RBP8.58□□□□□ -1.04
RN7SKP248-201ENST00000516278 CHMP7Q8WUX9 453 aaPredicted RBP8.58□□□□□ -1.04
RN7SKP248-201ENST00000516278 NOP58Q9Y2X3 529 aaKnown RBP8.58□□□□□ -1.04
RN7SKP248-201ENST00000516278 LGR5O75473 907 aa8.57□□□□□ -1.04
RN7SKP248-201ENST00000516278 GMPRP36959 345 aa8.57□□□□□ -1.04
RN7SKP248-201ENST00000516278 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
RN7SKP248-201ENST00000516278 NLRP8Q86W28 1048 aa8.57□□□□□ -1.04
RN7SKP248-201ENST00000516278 GTPBP3Q969Y2 492 aaKnown RBP8.57□□□□□ -1.04
RN7SKP248-201ENST00000516278 ZIC5Q96T25 663 aa8.57□□□□□ -1.04
RN7SKP248-201ENST00000516278 HCN4Q9Y3Q4 1203 aa8.57□□□□□ -1.04
RN7SKP248-201ENST00000516278 GPC6Q9Y625 555 aaPredicted RBP8.57□□□□□ -1.04
RN7SKP248-201ENST00000516278 AQRO60306 1485 aaKnown RBP eCLIP8.57□□□□□ -1.04
RN7SKP248-201ENST00000516278 LRRC9Q6ZRR7 1453 aa8.57□□□□□ -1.04
RN7SKP248-201ENST00000516278 ATAD2BQ9ULI0 1458 aa8.57□□□□□ -1.04
RN7SKP248-201ENST00000516278 A0A1W2PNR3 127 aa8.56□□□□□ -1.04
RN7SKP248-201ENST00000516278 WIPF1O43516 503 aa8.56□□□□□ -1.04
RN7SKP248-201ENST00000516278 FOXO3O43524 673 aa8.56□□□□□ -1.04
RN7SKP248-201ENST00000516278 FIGNL1Q6PIW4 674 aa8.56□□□□□ -1.04
RN7SKP248-201ENST00000516278 BICDL1Q6ZP65 573 aa8.56□□□□□ -1.04
RN7SKP248-201ENST00000516278 C7orf43Q8WVR3 580 aa8.56□□□□□ -1.04
RN7SKP248-201ENST00000516278 TRERF1Q96PN7 1200 aa8.56□□□□□ -1.04
RN7SKP248-201ENST00000516278 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.56□□□□□ -1.04
RN7SKP248-201ENST00000516278 ZBED9Q6R2W3 1325 aa8.55□□□□□ -1.04
RN7SKP248-201ENST00000516278 SH3PXD2AQ5TCZ1 1133 aa8.55□□□□□ -1.04
RN7SKP248-201ENST00000516278 CLP1Q92989 425 aaKnown RBP8.55□□□□□ -1.04
RN7SKP248-201ENST00000516278 CCDC18Q5T9S5 1454 aa8.55□□□□□ -1.04
RN7SKP248-201ENST00000516278 ARHGAP35Q9NRY4 1499 aa8.55□□□□□ -1.04
RN7SKP248-201ENST00000516278 UACAQ9BZF9 1416 aa8.54□□□□□ -1.04
RN7SKP248-201ENST00000516278 WDR97A6NE52 1622 aa8.54□□□□□ -1.04
RN7SKP248-201ENST00000516278 THBS1P07996 1170 aa8.54□□□□□ -1.04
RN7SKP248-201ENST00000516278 VTI1AQ96AJ9 217 aa8.54□□□□□ -1.04
RN7SKP248-201ENST00000516278 PRIMPOLQ96LW4 560 aa8.54□□□□□ -1.04
RN7SKP248-201ENST00000516278 CFHR5Q9BXR6 569 aa8.54□□□□□ -1.04
RN7SKP248-201ENST00000516278 COL25A1Q9BXS0 654 aaPredicted RBP8.54□□□□□ -1.04
RN7SKP248-201ENST00000516278 PHACTR1Q9C0D0 580 aa8.54□□□□□ -1.04
RN7SKP248-201ENST00000516278 NEUROD4Q9HD90 331 aa8.54□□□□□ -1.04
RN7SKP248-201ENST00000516278 PHF24Q9UPV7 400 aa8.54□□□□□ -1.04
RN7SKP248-201ENST00000516278 GJA3Q9Y6H8 435 aa8.54□□□□□ -1.04
RN7SKP248-201ENST00000516278 PPM1GO15355 546 aaPredicted RBP8.53□□□□□ -1.04
RN7SKP248-201ENST00000516278 PRMT3O60678 531 aa8.53□□□□□ -1.04
RN7SKP248-201ENST00000516278 HNRNPUQ00839 825 aaKnown RBP eCLIP8.53□□□□□ -1.04
RN7SKP248-201ENST00000516278 OCLNQ16625 522 aa8.53□□□□□ -1.04
RN7SKP248-201ENST00000516278 ALDH16A1Q8IZ83 802 aa8.53□□□□□ -1.04
RN7SKP248-201ENST00000516278 ZCCHC2Q9C0B9 1178 aaKnown RBP8.53□□□□□ -1.04
RN7SKP248-201ENST00000516278 ANKIB1Q9P2G1 1089 aa8.53□□□□□ -1.04
RN7SKP248-201ENST00000516278 PCDHGC4Q9Y5F7 938 aa8.53□□□□□ -1.04
RN7SKP248-201ENST00000516278 EFCAB5A4FU69 1503 aa8.53□□□□□ -1.04
RN7SKP248-201ENST00000516278 UBAP2LQ14157 1087 aaKnown RBP8.52□□□□□ -1.05
RN7SKP248-201ENST00000516278 HIF1AQ16665 826 aa8.52□□□□□ -1.05
RN7SKP248-201ENST00000516278 RHPN1Q8TCX5 695 aa8.52□□□□□ -1.05
RN7SKP248-201ENST00000516278 IPO9Q96P70 1041 aaKnown RBP8.52□□□□□ -1.05
RN7SKP248-201ENST00000516278 CFAP43Q8NDM7 1665 aa8.52□□□□□ -1.05
RN7SKP248-201ENST00000516278 FYCO1Q9BQS8 1478 aa8.51□□□□□ -1.05
RN7SKP248-201ENST00000516278 CUX1P39880 1505 aa8.51□□□□□ -1.05
RN7SKP248-201ENST00000516278 HMGXB3Q12766 1538 aa8.51□□□□□ -1.05
RN7SKP248-201ENST00000516278 GPR25O00155 361 aa8.51□□□□□ -1.05
RN7SKP248-201ENST00000516278 SAMD5Q5TGI4 173 aa8.51□□□□□ -1.05
RN7SKP248-201ENST00000516278 CNTNAP3BQ96NU0 1288 aa8.51□□□□□ -1.05
RN7SKP248-201ENST00000516278 CNTNAP3Q9BZ76 1288 aa8.51□□□□□ -1.05
RN7SKP248-201ENST00000516278 ATXN7L1Q9ULK2 861 aaPredicted RBP8.51□□□□□ -1.05
RN7SKP248-201ENST00000516278 ARID4BQ4LE39 1312 aaPredicted RBP8.51□□□□□ -1.05
RN7SKP248-201ENST00000516278 HFM1A2PYH4 1435 aa8.5□□□□□ -1.05
RN7SKP248-201ENST00000516278 TMEM88BA6NKF7 163 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms