RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 MBIPQ9NS73 344 aa16.63■□□□□ 0.25
CLCN3-210ENST00000515420 PDZRN3Q9UPQ7 1066 aa16.63■□□□□ 0.25
CLCN3-210ENST00000515420 MAP3K15Q6ZN16 1313 aa16.63■□□□□ 0.25
CLCN3-210ENST00000515420 ATP10DQ9P241 1426 aa16.62■□□□□ 0.25
CLCN3-210ENST00000515420 KCNA3P22001 575 aa16.62■□□□□ 0.25
CLCN3-210ENST00000515420 PDIA6Q15084 440 aa16.62■□□□□ 0.25
CLCN3-210ENST00000515420 KIF6Q6ZMV9 814 aa16.62■□□□□ 0.25
CLCN3-210ENST00000515420 LRP10Q7Z4F1 713 aa16.62■□□□□ 0.25
CLCN3-210ENST00000515420 NGEFQ8N5V2 710 aa16.62■□□□□ 0.25
CLCN3-210ENST00000515420 MYL6BP14649 208 aa16.61■□□□□ 0.25
CLCN3-210ENST00000515420 EIF2S2P20042 333 aaKnown RBP16.61■□□□□ 0.25
CLCN3-210ENST00000515420 PRR5LQ6MZQ0 368 aa16.61■□□□□ 0.25
CLCN3-210ENST00000515420 WWC1Q8IX03 1113 aa16.61■□□□□ 0.25
CLCN3-210ENST00000515420 CNBD1Q8NA66 436 aa16.61■□□□□ 0.25
CLCN3-210ENST00000515420 PIM2Q9P1W9 311 aa16.61■□□□□ 0.25
CLCN3-210ENST00000515420 IL16Q14005 1332 aa16.61■□□□□ 0.25
CLCN3-210ENST00000515420 BRIP1Q9BX63 1249 aa16.6■□□□□ 0.25
CLCN3-210ENST00000515420 CHMP4AQ9BY43 222 aa16.6■□□□□ 0.25
CLCN3-210ENST00000515420 DDX21Q9NR30 783 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLCN3-210ENST00000515420 IBTKQ9P2D0 1353 aaPredicted RBP16.6■□□□□ 0.25
CLCN3-210ENST00000515420 PDE6BP35913 854 aa16.59■□□□□ 0.25
CLCN3-210ENST00000515420 ST5P78524 1137 aa16.59■□□□□ 0.25
CLCN3-210ENST00000515420 HLFQ16534 295 aa16.59■□□□□ 0.25
CLCN3-210ENST00000515420 KRT24Q2M2I5 525 aa16.59■□□□□ 0.25
CLCN3-210ENST00000515420 HDGFL1Q5TGJ6 251 aa16.59■□□□□ 0.25
CLCN3-210ENST00000515420 DUSP27Q5VZP5 1158 aa16.59■□□□□ 0.25
CLCN3-210ENST00000515420 TTLL7Q6ZT98 887 aa16.59■□□□□ 0.25
CLCN3-210ENST00000515420 NIP7Q9Y221 180 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLCN3-210ENST00000515420 BCS1LQ9Y276 419 aa16.59■□□□□ 0.25
CLCN3-210ENST00000515420 ANKRD36CQ5JPF3 1778 aa16.59■□□□□ 0.25
CLCN3-210ENST00000515420 DALRD3Q5D0E6 543 aaKnown RBP16.58■□□□□ 0.24
CLCN3-210ENST00000515420 GIGYF2Q6Y7W6 1299 aaKnown RBP16.58■□□□□ 0.24
CLCN3-210ENST00000515420 NBPF5PQ86XG9 351 aaPredicted RBP16.58■□□□□ 0.24
CLCN3-210ENST00000515420 DBF4Q9UBU7 674 aaPredicted RBP16.58■□□□□ 0.24
CLCN3-210ENST00000515420 COL11A2P13942 1736 aaPredicted RBP16.57■□□□□ 0.24
CLCN3-210ENST00000515420 H0YIN7 160 aa16.57■□□□□ 0.24
CLCN3-210ENST00000515420 NPHP1O15259 732 aa16.57■□□□□ 0.24
CLCN3-210ENST00000515420 CHRNA5P30532 468 aa16.57■□□□□ 0.24
CLCN3-210ENST00000515420 PROSER3Q2NL68 480 aa16.57■□□□□ 0.24
CLCN3-210ENST00000515420 TPTE2Q6XPS3 522 aa16.57■□□□□ 0.24
CLCN3-210ENST00000515420 ARFGEF2Q9Y6D5 1785 aa16.56■□□□□ 0.24
CLCN3-210ENST00000515420 RIC1Q4ADV7 1423 aa16.56■□□□□ 0.24
CLCN3-210ENST00000515420 WDR63Q8IWG1 891 aa16.56■□□□□ 0.24
CLCN3-210ENST00000515420 FAM9BQ8IZU0 186 aa16.56■□□□□ 0.24
CLCN3-210ENST00000515420 NYXQ9GZU5 481 aa16.56■□□□□ 0.24
CLCN3-210ENST00000515420 WWC3Q9ULE0 1092 aa16.56■□□□□ 0.24
CLCN3-210ENST00000515420 C2CD5Q86YS7 1000 aa16.55■□□□□ 0.24
CLCN3-210ENST00000515420 ZNF34Q8IZ26 560 aa16.55■□□□□ 0.24
CLCN3-210ENST00000515420 NECTIN2Q92692 538 aa16.55■□□□□ 0.24
CLCN3-210ENST00000515420 ZBTB3Q9H5J0 574 aa16.55■□□□□ 0.24
CLCN3-210ENST00000515420 HYPKQ9NX55 129 aa16.55■□□□□ 0.24
CLCN3-210ENST00000515420 CHPF2Q9P2E5 772 aa16.55■□□□□ 0.24
CLCN3-210ENST00000515420 KLRG2A4D1S0 409 aaPredicted RBP16.54■□□□□ 0.24
CLCN3-210ENST00000515420 CCER2I3L3R5 266 aa16.54■□□□□ 0.24
CLCN3-210ENST00000515420 ANXA1P04083 346 aa16.54■□□□□ 0.24
CLCN3-210ENST00000515420 MAPK8IP2Q13387 824 aaPredicted RBP16.54■□□□□ 0.24
CLCN3-210ENST00000515420 PARP10Q53GL7 1025 aa16.54■□□□□ 0.24
CLCN3-210ENST00000515420 HSP90AB3PQ58FF7 597 aa16.54■□□□□ 0.24
CLCN3-210ENST00000515420 COPS6Q7L5N1 327 aa16.54■□□□□ 0.24
CLCN3-210ENST00000515420 TTLL6Q8N841 843 aa16.54■□□□□ 0.24
CLCN3-210ENST00000515420 XAGE3Q8WTP9 111 aa16.54■□□□□ 0.24
CLCN3-210ENST00000515420 ADCY9O60503 1353 aa16.53■□□□□ 0.24
CLCN3-210ENST00000515420 RNF123Q5XPI4 1314 aa16.53■□□□□ 0.24
CLCN3-210ENST00000515420 UBN2Q6ZU65 1347 aa16.52■□□□□ 0.24
CLCN3-210ENST00000515420 CACNA1FO60840 1977 aa16.52■□□□□ 0.24
CLCN3-210ENST00000515420 SRGNP10124 158 aa16.52■□□□□ 0.24
CLCN3-210ENST00000515420 STYK1Q6J9G0 422 aa16.52■□□□□ 0.24
CLCN3-210ENST00000515420 C8orf58Q8NAV2 365 aa16.52■□□□□ 0.24
CLCN3-210ENST00000515420 AIMP1Q12904 312 aaKnown RBP16.51■□□□□ 0.23
CLCN3-210ENST00000515420 CCDC30Q5VVM6 783 aa16.51■□□□□ 0.23
CLCN3-210ENST00000515420 PPP1R42Q7Z4L9 355 aa16.51■□□□□ 0.23
CLCN3-210ENST00000515420 ZNF784Q8NCA9 323 aaPredicted RBP16.51■□□□□ 0.23
CLCN3-210ENST00000515420 PLBD2Q8NHP8 589 aa16.51■□□□□ 0.23
CLCN3-210ENST00000515420 TSR2Q969E8 191 aaKnown RBP16.51■□□□□ 0.23
CLCN3-210ENST00000515420 MASTLQ96GX5 879 aa16.51■□□□□ 0.23
CLCN3-210ENST00000515420 GTF2E1P29083 439 aaPredicted RBP16.5■□□□□ 0.23
CLCN3-210ENST00000515420 ANKRD13DQ6ZTN6 518 aa16.5■□□□□ 0.23
CLCN3-210ENST00000515420 ARHGAP27Q6ZUM4 889 aa16.5■□□□□ 0.23
CLCN3-210ENST00000515420 CCDC24Q8N4L8 307 aa16.5■□□□□ 0.23
CLCN3-210ENST00000515420 CNKSR1Q969H4 720 aa16.5■□□□□ 0.23
CLCN3-210ENST00000515420 SBF1O95248 1867 aa16.5■□□□□ 0.23
CLCN3-210ENST00000515420 TNRC6CQ9HCJ0 1690 aaKnown RBP16.5■□□□□ 0.23
CLCN3-210ENST00000515420 FANCIQ9NVI1 1328 aa16.49■□□□□ 0.23
CLCN3-210ENST00000515420 ELL2O00472 640 aaPredicted RBP16.49■□□□□ 0.23
CLCN3-210ENST00000515420 NTSR2O95665 410 aa16.49■□□□□ 0.23
CLCN3-210ENST00000515420 NPR1P16066 1061 aa16.49■□□□□ 0.23
CLCN3-210ENST00000515420 GPTP24298 496 aa16.49■□□□□ 0.23
CLCN3-210ENST00000515420 TCIRG1Q13488 830 aa16.49■□□□□ 0.23
CLCN3-210ENST00000515420 CACNA1SQ13698 1873 aa16.49■□□□□ 0.23
CLCN3-210ENST00000515420 SUSD4Q5VX71 490 aa16.49■□□□□ 0.23
CLCN3-210ENST00000515420 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
CLCN3-210ENST00000515420 FER1L6Q2WGJ9 1857 aa16.48■□□□□ 0.23
CLCN3-210ENST00000515420 SLX4Q8IY92 1834 aa16.48■□□□□ 0.23
CLCN3-210ENST00000515420 FAM177BA6PVY3 158 aa16.48■□□□□ 0.23
CLCN3-210ENST00000515420 CRY2Q49AN0 593 aa16.48■□□□□ 0.23
CLCN3-210ENST00000515420 TSPYL6Q8N831 410 aa16.48■□□□□ 0.23
CLCN3-210ENST00000515420 ZNF622Q969S3 477 aaKnown RBP eCLIP16.48■□□□□ 0.23
CLCN3-210ENST00000515420 ZNF521Q96K83 1311 aa16.47■□□□□ 0.23
CLCN3-210ENST00000515420 SENP3-EIF4A1A0A087X0R7 540 aa16.47■□□□□ 0.23
CLCN3-210ENST00000515420 TWISTNBQ3B726 338 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms