RNA–Protein interactions for RNA: ENST00000511092.5

CLCN3-207, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-207ENST00000511092 ABT1Q9ULW3 272 aaKnown RBP9.53□□□□□ -0.88
CLCN3-207ENST00000511092 PKD1L2Q7Z442 2459 aa9.53□□□□□ -0.88
CLCN3-207ENST00000511092 GRXCR2A6NFK2 248 aa9.52□□□□□ -0.89
CLCN3-207ENST00000511092 NBR1Q14596 966 aa9.52□□□□□ -0.89
CLCN3-207ENST00000511092 MYOM3Q5VTT5 1437 aa9.52□□□□□ -0.89
CLCN3-207ENST00000511092 TOM1L2Q6ZVM7 507 aa9.52□□□□□ -0.89
CLCN3-207ENST00000511092 ARHGEF1Q92888 912 aaKnown RBP9.52□□□□□ -0.89
CLCN3-207ENST00000511092 DCAF5Q96JK2 942 aa9.52□□□□□ -0.89
CLCN3-207ENST00000511092 STAC3Q96MF2 364 aa9.52□□□□□ -0.89
CLCN3-207ENST00000511092 LAMA2P24043 3122 aaKnown RBP9.51□□□□□ -0.89
CLCN3-207ENST00000511092 C4BP0C0L5 1744 aa9.51□□□□□ -0.89
CLCN3-207ENST00000511092 HPS5Q9UPZ3 1129 aa9.51□□□□□ -0.89
CLCN3-207ENST00000511092 LAMA3Q16787 3333 aa9.51□□□□□ -0.89
CLCN3-207ENST00000511092 CACNA1GO43497 2377 aa9.51□□□□□ -0.89
CLCN3-207ENST00000511092 ZC3H4Q9UPT8 1303 aaKnown RBP9.51□□□□□ -0.89
CLCN3-207ENST00000511092 ZBTB7CA1YPR0 619 aa9.5□□□□□ -0.89
CLCN3-207ENST00000511092 KCNA3P22001 575 aa9.5□□□□□ -0.89
CLCN3-207ENST00000511092 MUC3AQ02505 3323 aa9.49□□□□□ -0.89
CLCN3-207ENST00000511092 ANKARQ7Z5J8 1434 aa9.49□□□□□ -0.89
CLCN3-207ENST00000511092 EXOC5O00471 708 aa9.49□□□□□ -0.89
CLCN3-207ENST00000511092 C6orf132Q5T0Z8 1188 aa9.49□□□□□ -0.89
CLCN3-207ENST00000511092 CCDC24Q8N4L8 307 aa9.49□□□□□ -0.89
CLCN3-207ENST00000511092 KCTD12Q96CX2 325 aaKnown RBP9.49□□□□□ -0.89
CLCN3-207ENST00000511092 NBPF3Q9H094 633 aa9.49□□□□□ -0.89
CLCN3-207ENST00000511092 CCNL1Q9UK58 526 aaPredicted RBP9.49□□□□□ -0.89
CLCN3-207ENST00000511092 RBBP6Q7Z6E9 1792 aaKnown RBP9.49□□□□□ -0.89
CLCN3-207ENST00000511092 NSD2O96028 1365 aa9.49□□□□□ -0.89
CLCN3-207ENST00000511092 DAPK1P53355 1430 aa9.48□□□□□ -0.89
CLCN3-207ENST00000511092 C4AP0C0L4 1744 aa9.48□□□□□ -0.89
CLCN3-207ENST00000511092 SCN4AP35499 1836 aa9.48□□□□□ -0.89
CLCN3-207ENST00000511092 MAP3K7O43318 606 aa9.48□□□□□ -0.89
CLCN3-207ENST00000511092 CHIC2Q9UKJ5 165 aa9.48□□□□□ -0.89
CLCN3-207ENST00000511092 ERBB4Q15303 1308 aa9.48□□□□□ -0.89
CLCN3-207ENST00000511092 PIEZO1Q92508 2521 aa9.48□□□□□ -0.89
CLCN3-207ENST00000511092 TGFB2P61812 414 aa9.47□□□□□ -0.89
CLCN3-207ENST00000511092 FMR1Q06787 632 aaKnown RBP eCLIP9.47□□□□□ -0.89
CLCN3-207ENST00000511092 RABGEF1Q9UJ41 708 aa9.47□□□□□ -0.89
CLCN3-207ENST00000511092 KIAA0100Q14667 2235 aaKnown RBP9.46□□□□□ -0.89
CLCN3-207ENST00000511092 MRPL50Q8N5N7 158 aaKnown RBP9.46□□□□□ -0.9
CLCN3-207ENST00000511092 MINK1Q8N4C8 1332 aaPredicted RBP9.46□□□□□ -0.9
CLCN3-207ENST00000511092 PPIP5K1Q6PFW1 1433 aa9.46□□□□□ -0.9
CLCN3-207ENST00000511092 CA12O43570 354 aa9.45□□□□□ -0.9
CLCN3-207ENST00000511092 LDHDQ86WU2 507 aa9.45□□□□□ -0.9
CLCN3-207ENST00000511092 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.45□□□□□ -0.9
CLCN3-207ENST00000511092 CDCA7Q9BWT1 371 aaPredicted RBP9.45□□□□□ -0.9
CLCN3-207ENST00000511092 WDR17Q8IZU2 1322 aa9.45□□□□□ -0.9
CLCN3-207ENST00000511092 EYSQ5T1H1 3165 aa9.45□□□□□ -0.9
CLCN3-207ENST00000511092 SOX1O00570 391 aaPredicted RBP9.44□□□□□ -0.9
CLCN3-207ENST00000511092 MMP10P09238 476 aa9.44□□□□□ -0.9
CLCN3-207ENST00000511092 CIAPIN1Q6FI81 312 aa9.44□□□□□ -0.9
CLCN3-207ENST00000511092 THSD4Q6ZMP0 1018 aa9.44□□□□□ -0.9
CLCN3-207ENST00000511092 PLA2G2EQ9NZK7 142 aa9.44□□□□□ -0.9
CLCN3-207ENST00000511092 RBM27Q9P2N5 1060 aaKnown RBP9.44□□□□□ -0.9
CLCN3-207ENST00000511092 KDM2AQ9Y2K7 1162 aa9.44□□□□□ -0.9
CLCN3-207ENST00000511092 AKAP11Q9UKA4 1901 aa9.44□□□□□ -0.9
CLCN3-207ENST00000511092 HTTP42858 3142 aa9.43□□□□□ -0.9
CLCN3-207ENST00000511092 ANKRD30AQ9BXX3 1397 aa9.43□□□□□ -0.9
CLCN3-207ENST00000511092 ECE1P42892 770 aa9.43□□□□□ -0.9
CLCN3-207ENST00000511092 SAFB2Q14151 953 aaKnown RBP eCLIP9.43□□□□□ -0.9
CLCN3-207ENST00000511092 TSR1Q2NL82 804 aaKnown RBP9.43□□□□□ -0.9
CLCN3-207ENST00000511092 PROX2Q3B8N5 592 aa9.43□□□□□ -0.9
CLCN3-207ENST00000511092 TMEM132EQ6IEE7 984 aa9.43□□□□□ -0.9
CLCN3-207ENST00000511092 VSIG10Q8N0Z9 540 aa9.43□□□□□ -0.9
CLCN3-207ENST00000511092 CENPFP49454 3210 aa9.43□□□□□ -0.9
CLCN3-207ENST00000511092 ABCC11Q96J66 1382 aa9.42□□□□□ -0.9
CLCN3-207ENST00000511092 LMNB1P20700 586 aa9.42□□□□□ -0.9
CLCN3-207ENST00000511092 OSBPP22059 807 aa9.42□□□□□ -0.9
CLCN3-207ENST00000511092 LAPTM4BQ86VI4 370 aa9.42□□□□□ -0.9
CLCN3-207ENST00000511092 LRCH3Q96II8 777 aa9.42□□□□□ -0.9
CLCN3-207ENST00000511092 ZIC5Q96T25 663 aa9.42□□□□□ -0.9
CLCN3-207ENST00000511092 BAHCC1Q9P281 2608 aa9.41□□□□□ -0.9
CLCN3-207ENST00000511092 GOLGA8CPA6NN73 597 aa9.41□□□□□ -0.9
CLCN3-207ENST00000511092 H0YGN5 161 aa9.41□□□□□ -0.9
CLCN3-207ENST00000511092 MAP2K2P36507 400 aa9.41□□□□□ -0.9
CLCN3-207ENST00000511092 DALRD3Q5D0E6 543 aaKnown RBP9.41□□□□□ -0.9
CLCN3-207ENST00000511092 MAP1SQ66K74 1059 aaPredicted RBP9.41□□□□□ -0.9
CLCN3-207ENST00000511092 NGDNQ8NEJ9 315 aaKnown RBP9.41□□□□□ -0.9
CLCN3-207ENST00000511092 WNT2BQ93097 391 aa9.41□□□□□ -0.9
CLCN3-207ENST00000511092 PRUNE2Q8WUY3 3088 aa9.41□□□□□ -0.9
CLCN3-207ENST00000511092 ANKRD50Q9ULJ7 1429 aa9.4□□□□□ -0.9
CLCN3-207ENST00000511092 DLEC1Q9Y238 1755 aa9.4□□□□□ -0.9
CLCN3-207ENST00000511092 DDNO94850 711 aaPredicted RBP9.4□□□□□ -0.9
CLCN3-207ENST00000511092 MLLT3P42568 568 aaPredicted RBP9.4□□□□□ -0.9
CLCN3-207ENST00000511092 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.9
CLCN3-207ENST00000511092 BRPF1P55201 1214 aaPredicted RBP9.4□□□□□ -0.9
CLCN3-207ENST00000511092 EAPPQ56P03 285 aaPredicted RBP9.4□□□□□ -0.9
CLCN3-207ENST00000511092 CTU1Q7Z7A3 348 aaKnown RBP9.4□□□□□ -0.9
CLCN3-207ENST00000511092 YTHDC2Q9H6S0 1430 aaKnown RBP9.39□□□□□ -0.91
CLCN3-207ENST00000511092 TRIM6-TRIM34B2RNG4 842 aa9.39□□□□□ -0.91
CLCN3-207ENST00000511092 FLAD1Q8NFF5 587 aa9.39□□□□□ -0.91
CLCN3-207ENST00000511092 SYTL4Q96C24 671 aaPredicted RBP9.39□□□□□ -0.91
CLCN3-207ENST00000511092 PIM2Q9P1W9 311 aa9.39□□□□□ -0.91
CLCN3-207ENST00000511092 FER1L6Q2WGJ9 1857 aa9.38□□□□□ -0.91
CLCN3-207ENST00000511092 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.38□□□□□ -0.91
CLCN3-207ENST00000511092 SEMA3EO15041 775 aa9.38□□□□□ -0.91
CLCN3-207ENST00000511092 CHRNA5P30532 468 aa9.38□□□□□ -0.91
CLCN3-207ENST00000511092 CARD10Q9BWT7 1032 aa9.38□□□□□ -0.91
CLCN3-207ENST00000511092 TAF1DQ9H5J8 278 aaPredicted RBP9.38□□□□□ -0.91
CLCN3-207ENST00000511092 KIAA1468Q9P260 1216 aa9.38□□□□□ -0.91
CLCN3-207ENST00000511092 TMEM265A0A087WTH1 108 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms