RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 TMOD3Q9NYL9 352 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 NCOA1Q15788 1441 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 GSTTP1A0A1W2PQM5 241 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 GCOM1H8Y6P7 765 aaPredicted RBP12.24□□□□□ -0.45
NEK1-206ENST00000510533 MYZAPP0CAP1 466 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 PRIMPOLQ96LW4 560 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 NAA15Q9BXJ9 866 aaKnown RBP12.24□□□□□ -0.45
NEK1-206ENST00000510533 GOPCQ9HD26 462 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 IFT140Q96RY7 1462 aa12.24□□□□□ -0.45
NEK1-206ENST00000510533 DYNC1I1O14576 645 aa12.23□□□□□ -0.45
NEK1-206ENST00000510533 MTIF2P46199 727 aaKnown RBP12.23□□□□□ -0.45
NEK1-206ENST00000510533 MAPK8IP2Q13387 824 aaPredicted RBP12.23□□□□□ -0.45
NEK1-206ENST00000510533 CCDC150Q8NCX0 1101 aa12.23□□□□□ -0.45
NEK1-206ENST00000510533 USP16Q9Y5T5 823 aa12.23□□□□□ -0.45
NEK1-206ENST00000510533 CDK13Q14004 1512 aaKnown RBP12.23□□□□□ -0.45
NEK1-206ENST00000510533 GOLGA6L10A0A0M3HER8 536 aa12.23□□□□□ -0.45
NEK1-206ENST00000510533 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
NEK1-206ENST00000510533 SMC1AQ14683 1233 aaKnown RBP12.23□□□□□ -0.45
NEK1-206ENST00000510533 CATIPQ7Z7H3 387 aa12.23□□□□□ -0.45
NEK1-206ENST00000510533 DZIP1Q86YF9 867 aaKnown RBP12.23□□□□□ -0.45
NEK1-206ENST00000510533 ZNF444Q8N0Y2 327 aaPredicted RBP12.23□□□□□ -0.45
NEK1-206ENST00000510533 USHBP1Q8N6Y0 703 aa12.23□□□□□ -0.45
NEK1-206ENST00000510533 IARSP41252 1262 aaKnown RBP12.23□□□□□ -0.45
NEK1-206ENST00000510533 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.23□□□□□ -0.45
NEK1-206ENST00000510533 PAXBP1Q9Y5B6 917 aa12.23□□□□□ -0.45
NEK1-206ENST00000510533 CEP135Q66GS9 1140 aa12.23□□□□□ -0.45
NEK1-206ENST00000510533 CRACR2BQ8N4Y2 399 aaPredicted RBP12.23□□□□□ -0.45
NEK1-206ENST00000510533 HMG20BQ9P0W2 317 aa12.23□□□□□ -0.45
NEK1-206ENST00000510533 PPP1R1BQ9UD71 204 aaPredicted RBP12.23□□□□□ -0.45
NEK1-206ENST00000510533 GTF2F1P35269 517 aaKnown RBP eCLIP12.22□□□□□ -0.45
NEK1-206ENST00000510533 LRSAM1Q6UWE0 723 aa12.22□□□□□ -0.45
NEK1-206ENST00000510533 NEK1Q96PY6 1258 aa12.22□□□□□ -0.45
NEK1-206ENST00000510533 BCCIPQ9P287 314 aaKnown RBP eCLIP12.22□□□□□ -0.45
NEK1-206ENST00000510533 A0A087WZG4 1122 aa12.22□□□□□ -0.45
NEK1-206ENST00000510533 RNF187Q5TA31 235 aaPredicted RBP12.22□□□□□ -0.45
NEK1-206ENST00000510533 TRIM21P19474 475 aaKnown RBP12.22□□□□□ -0.45
NEK1-206ENST00000510533 BMS1Q14692 1282 aaKnown RBP12.22□□□□□ -0.45
NEK1-206ENST00000510533 MPRIPQ6WCQ1 1025 aa12.22□□□□□ -0.45
NEK1-206ENST00000510533 ANKRD18BA2A2Z9 1011 aa12.22□□□□□ -0.45
NEK1-206ENST00000510533 SPECC1Q5M775 1068 aa12.22□□□□□ -0.45
NEK1-206ENST00000510533 KANK3Q6NY19 840 aa12.22□□□□□ -0.45
NEK1-206ENST00000510533 ORC3Q9UBD5 711 aaPredicted RBP12.22□□□□□ -0.45
NEK1-206ENST00000510533 NSD2O96028 1365 aa12.21□□□□□ -0.45
NEK1-206ENST00000510533 PYM1Q9BRP8 204 aaKnown RBP12.21□□□□□ -0.45
NEK1-206ENST00000510533 GOLIM4O00461 696 aa12.21□□□□□ -0.45
NEK1-206ENST00000510533 HCLS1P14317 486 aaPredicted RBP12.21□□□□□ -0.45
NEK1-206ENST00000510533 HLTFQ14527 1009 aaKnown RBP eCLIP12.21□□□□□ -0.45
NEK1-206ENST00000510533 CCDC102BQ68D86 513 aa12.21□□□□□ -0.45
NEK1-206ENST00000510533 CTR9Q6PD62 1173 aa12.21□□□□□ -0.45
NEK1-206ENST00000510533 ZSCAN16Q9H4T2 348 aaPredicted RBP12.21□□□□□ -0.45
NEK1-206ENST00000510533 AMPD3Q01432 767 aa12.21□□□□□ -0.45
NEK1-206ENST00000510533 TRMT112Q9UI30 125 aaKnown RBP12.21□□□□□ -0.45
NEK1-206ENST00000510533 TMX3Q96JJ7 454 aa12.21□□□□□ -0.46
NEK1-206ENST00000510533 PHF23Q9BUL5 403 aaPredicted RBP12.21□□□□□ -0.46
NEK1-206ENST00000510533 MRC2Q9UBG0 1479 aa12.21□□□□□ -0.46
NEK1-206ENST00000510533 IL16Q14005 1332 aa12.21□□□□□ -0.46
NEK1-206ENST00000510533 ZSCAN22P10073 491 aaPredicted RBP12.2□□□□□ -0.46
NEK1-206ENST00000510533 ANAPC15P60006 121 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 HDAC1Q13547 482 aaPredicted RBP12.2□□□□□ -0.46
NEK1-206ENST00000510533 CCDC96Q2M329 555 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 FAM114A1Q8IWE2 563 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 CTNNBL1Q8WYA6 563 aaPredicted RBP12.2□□□□□ -0.46
NEK1-206ENST00000510533 TAOK3Q9H2K8 898 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 TCP11L1Q9NUJ3 509 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 GNG11P61952 73 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 TTF1Q15361 905 aaPredicted RBP12.2□□□□□ -0.46
NEK1-206ENST00000510533 TMEM67Q5HYA8 995 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 CALML4Q96GE6 196 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 MAP3K2Q9Y2U5 619 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 CCDC171Q6TFL3 1326 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 NUCB1Q02818 461 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 PPP1R42Q7Z4L9 355 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 MBIPQ9NS73 344 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 TOPBP1Q92547 1522 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 CAMSAP2Q08AD1 1489 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 CCDC175P0C221 793 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 CCDC40Q4G0X9 1142 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 GIMAP6Q6P9H5 292 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 CUL5Q93034 780 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 SNAPC4Q5SXM2 1469 aa12.2□□□□□ -0.46
NEK1-206ENST00000510533 PPP4R3AQ6IN85 833 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 CCDC12Q8WUD4 166 aaPredicted RBP12.19□□□□□ -0.46
NEK1-206ENST00000510533 PANK2Q9BZ23 570 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 TMCO5BA8MYB1 307 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 IBSPP21815 317 aaPredicted RBP12.19□□□□□ -0.46
NEK1-206ENST00000510533 METAP2P50579 478 aaKnown RBP eCLIP12.19□□□□□ -0.46
NEK1-206ENST00000510533 NCOA7Q8NI08 942 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 TRERF1Q96PN7 1200 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 DNAI2Q9GZS0 605 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 TSHZ3Q63HK5 1081 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 HOOK3Q86VS8 718 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 ANKIB1Q9P2G1 1089 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 PIK3R4Q99570 1358 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 PTPN23Q9H3S7 1636 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 CETN1Q12798 172 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 ISM2Q6H9L7 571 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 ARHGEF11O15085 1522 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 ABCC5O15440 1437 aa12.19□□□□□ -0.46
NEK1-206ENST00000510533 TTC21BQ7Z4L5 1316 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms