RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 RTN1Q16799 776 aa7.78□□□□□ -1.16
HERC6-207ENST00000506842 GNASQ5JWF2 1037 aa7.78□□□□□ -1.16
HERC6-207ENST00000506842 C1orf53Q5VUE5 145 aa7.78□□□□□ -1.16
HERC6-207ENST00000506842 CYB5RLQ6IPT4 315 aa7.78□□□□□ -1.16
HERC6-207ENST00000506842 ALDH16A1Q8IZ83 802 aa7.78□□□□□ -1.16
HERC6-207ENST00000506842 DCTN4Q9UJW0 460 aa7.78□□□□□ -1.16
HERC6-207ENST00000506842 ZNF232Q9UNY5 417 aa7.78□□□□□ -1.16
HERC6-207ENST00000506842 PARP3Q9Y6F1 533 aa7.78□□□□□ -1.16
HERC6-207ENST00000506842 ARHGEF11O15085 1522 aa7.78□□□□□ -1.16
HERC6-207ENST00000506842 UPP2O95045 317 aa7.77□□□□□ -1.17
HERC6-207ENST00000506842 GTF2E1P29083 439 aaPredicted RBP7.77□□□□□ -1.17
HERC6-207ENST00000506842 CTSOP43234 321 aaPredicted RBP7.77□□□□□ -1.17
HERC6-207ENST00000506842 C4orf17Q53FE4 359 aa7.77□□□□□ -1.17
HERC6-207ENST00000506842 SLC27A3Q5K4L6 730 aa7.77□□□□□ -1.17
HERC6-207ENST00000506842 C7orf43Q8WVR3 580 aa7.77□□□□□ -1.17
HERC6-207ENST00000506842 HCN4Q9Y3Q4 1203 aa7.77□□□□□ -1.17
HERC6-207ENST00000506842 RIMBP3CA6NJZ7 1639 aa7.77□□□□□ -1.17
HERC6-207ENST00000506842 RIMBP3BA6NNM3 1639 aa7.77□□□□□ -1.17
HERC6-207ENST00000506842 RIMBP3Q9UFD9 1639 aa7.77□□□□□ -1.17
HERC6-207ENST00000506842 SYNJ2O15056 1496 aa7.76□□□□□ -1.17
HERC6-207ENST00000506842 CHD1O14646 1710 aa7.76□□□□□ -1.17
HERC6-207ENST00000506842 SMCPP49901 116 aaPredicted RBP7.76□□□□□ -1.17
HERC6-207ENST00000506842 MRPL14Q6P1L8 145 aaKnown RBP7.76□□□□□ -1.17
HERC6-207ENST00000506842 NPAS4Q8IUM7 802 aa7.76□□□□□ -1.17
HERC6-207ENST00000506842 ASB16Q96NS5 453 aa7.76□□□□□ -1.17
HERC6-207ENST00000506842 PHACTR1Q9C0D0 580 aa7.76□□□□□ -1.17
HERC6-207ENST00000506842 POLMQ9NP87 494 aaPredicted RBP7.76□□□□□ -1.17
HERC6-207ENST00000506842 SNAPC4Q5SXM2 1469 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 TOP2BQ02880 1626 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 ANKRD33BA6NCL7 494 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 FAM187AA6NFU0 413 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 TXLNAP40222 546 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 EIF1AXP47813 144 aaKnown RBP7.75□□□□□ -1.17
HERC6-207ENST00000506842 C11orf91Q3C1V1 193 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 WDR44Q5JSH3 913 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 FAM26DQ5JW98 314 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 ALKBH2Q6NS38 261 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 RNF217Q8TC41 542 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 ZNF428Q96B54 188 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 NGLY1Q96IV0 654 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 ZDHHC3Q9NYG2 299 aa7.75□□□□□ -1.17
HERC6-207ENST00000506842 RBM47A0AV96 593 aaKnown RBP7.74□□□□□ -1.17
HERC6-207ENST00000506842 FZD6O60353 706 aa7.74□□□□□ -1.17
HERC6-207ENST00000506842 BMP2P12643 396 aa7.74□□□□□ -1.17
HERC6-207ENST00000506842 BRD2P25440 801 aaKnown RBP7.74□□□□□ -1.17
HERC6-207ENST00000506842 MAPK1P28482 360 aa7.74□□□□□ -1.17
HERC6-207ENST00000506842 PLA2G4AP47712 749 aa7.74□□□□□ -1.17
HERC6-207ENST00000506842 RGL4Q8IZJ4 473 aa7.74□□□□□ -1.17
HERC6-207ENST00000506842 ABTB2Q8N961 1025 aa7.74□□□□□ -1.17
HERC6-207ENST00000506842 RBCK1Q9BYM8 510 aa7.74□□□□□ -1.17
HERC6-207ENST00000506842 BIVM-ERCC5R4GMW8 1640 aa7.74□□□□□ -1.17
HERC6-207ENST00000506842 ZBTB39O15060 712 aa7.73□□□□□ -1.17
HERC6-207ENST00000506842 DGAT1O75907 488 aa7.73□□□□□ -1.17
HERC6-207ENST00000506842 DGKZQ13574 1117 aa7.73□□□□□ -1.17
HERC6-207ENST00000506842 CTC1Q2NKJ3 1217 aa7.73□□□□□ -1.17
HERC6-207ENST00000506842 C6orf118Q5T5N4 469 aa7.73□□□□□ -1.17
HERC6-207ENST00000506842 NBPF10Q6P3W6 841 aaKnown RBP7.73□□□□□ -1.17
HERC6-207ENST00000506842 TRIM46Q7Z4K8 759 aa7.73□□□□□ -1.17
HERC6-207ENST00000506842 ETFBKMTQ8IXQ9 262 aa7.73□□□□□ -1.17
HERC6-207ENST00000506842 GPC6Q9Y625 555 aaPredicted RBP7.73□□□□□ -1.17
HERC6-207ENST00000506842 ABCA5Q8WWZ7 1642 aa7.72□□□□□ -1.17
HERC6-207ENST00000506842 POU4F2Q12837 409 aa7.72□□□□□ -1.17
HERC6-207ENST00000506842 COL19A1Q14993 1142 aa7.72□□□□□ -1.17
HERC6-207ENST00000506842 NBPF1Q3BBV0 1214 aa7.72□□□□□ -1.17
HERC6-207ENST00000506842 LYSMD3Q7Z3D4 306 aa7.72□□□□□ -1.17
HERC6-207ENST00000506842 ZSCAN29Q8IWY8 852 aaPredicted RBP7.72□□□□□ -1.17
HERC6-207ENST00000506842 CRIPAKQ8N1N5 446 aa7.72□□□□□ -1.17
HERC6-207ENST00000506842 IFT43Q96FT9 208 aa7.72□□□□□ -1.17
HERC6-207ENST00000506842 CITED4Q96RK1 184 aa7.72□□□□□ -1.17
HERC6-207ENST00000506842 KLK14Q9P0G3 267 aa7.72□□□□□ -1.17
HERC6-207ENST00000506842 SOS2Q07890 1332 aaPredicted RBP7.72□□□□□ -1.17
HERC6-207ENST00000506842 CLASP1Q7Z460 1538 aa7.72□□□□□ -1.17
HERC6-207ENST00000506842 TTLL8A6PVC2 850 aa7.71□□□□□ -1.18
HERC6-207ENST00000506842 NDUFB5O43674 189 aa7.71□□□□□ -1.18
HERC6-207ENST00000506842 IGHA2P01877 340 aa7.71□□□□□ -1.18
HERC6-207ENST00000506842 RANGAP1P46060 587 aaPredicted RBP7.71□□□□□ -1.18
HERC6-207ENST00000506842 RBM25P49756 843 aaKnown RBP7.71□□□□□ -1.18
HERC6-207ENST00000506842 SCARF1Q14162 830 aa7.71□□□□□ -1.18
HERC6-207ENST00000506842 CCDC87Q9NVE4 849 aa7.71□□□□□ -1.18
HERC6-207ENST00000506842 BCS1LQ9Y276 419 aa7.71□□□□□ -1.18
HERC6-207ENST00000506842 SYNJ1O43426 1573 aa7.71□□□□□ -1.18
HERC6-207ENST00000506842 ARAP1Q96P48 1450 aa7.7□□□□□ -1.18
HERC6-207ENST00000506842 ERICH3Q5RHP9 1530 aa7.7□□□□□ -1.18
HERC6-207ENST00000506842 NRG2O14511 850 aaPredicted RBP7.7□□□□□ -1.18
HERC6-207ENST00000506842 ATP4AP20648 1035 aa7.7□□□□□ -1.18
HERC6-207ENST00000506842 PHKA2P46019 1235 aa7.7□□□□□ -1.18
HERC6-207ENST00000506842 PRICKLE2Q7Z3G6 844 aa7.7□□□□□ -1.18
HERC6-207ENST00000506842 FBXO33Q7Z6M2 555 aa7.7□□□□□ -1.18
HERC6-207ENST00000506842 BRPF3Q9ULD4 1205 aa7.7□□□□□ -1.18
HERC6-207ENST00000506842 PBRM1Q86U86 1689 aa7.7□□□□□ -1.18
HERC6-207ENST00000506842 FHAD1B1AJZ9 1412 aa7.69□□□□□ -1.18
HERC6-207ENST00000506842 NUP160Q12769 1436 aa7.69□□□□□ -1.18
HERC6-207ENST00000506842 BMP1P13497 986 aa7.69□□□□□ -1.18
HERC6-207ENST00000506842 TATP17735 454 aaPredicted RBP7.69□□□□□ -1.18
HERC6-207ENST00000506842 HIF1AQ16665 826 aa7.69□□□□□ -1.18
HERC6-207ENST00000506842 IER5Q5VY09 327 aa7.69□□□□□ -1.18
HERC6-207ENST00000506842 TMC7Q7Z402 723 aa7.69□□□□□ -1.18
HERC6-207ENST00000506842 ATCAYQ86WG3 371 aa7.69□□□□□ -1.18
HERC6-207ENST00000506842 RHPN1Q8TCX5 695 aa7.69□□□□□ -1.18
HERC6-207ENST00000506842 KLRG1Q96E93 195 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms