RNA–Protein interactions for RNA: ENST00000506842.1

HERC6-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 706 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-207ENST00000506842 AEBP2Q6ZN18 517 aaPredicted RBP20.19■□□□□ 0.82
HERC6-207ENST00000506842 CHIC1Q5VXU3 224 aa20.12■□□□□ 0.81
HERC6-207ENST00000506842 PHF23Q9BUL5 403 aaPredicted RBP17.74■□□□□ 0.43
HERC6-207ENST00000506842 SENP3Q9H4L4 574 aaPredicted RBP17.04■□□□□ 0.32
HERC6-207ENST00000506842 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
HERC6-207ENST00000506842 FOXD1Q16676 465 aa15.77■□□□□ 0.12
HERC6-207ENST00000506842 PPP6R1Q9UPN7 881 aa15.51■□□□□ 0.07
HERC6-207ENST00000506842 ADRA2BP18089 450 aa15.49■□□□□ 0.07
HERC6-207ENST00000506842 PIAS4Q8N2W9 510 aaPredicted RBP14.93□□□□□ -0.02
HERC6-207ENST00000506842 KCNA4P22459 653 aa14.72□□□□□ -0.05
HERC6-207ENST00000506842 PPP4R3CPQ6ZMV5 832 aa14.59□□□□□ -0.07
HERC6-207ENST00000506842 MSH5O43196 834 aa14.37□□□□□ -0.11
HERC6-207ENST00000506842 NCBP3Q53F19 620 aaKnown RBP14.31□□□□□ -0.12
HERC6-207ENST00000506842 SCAF1Q9H7N4 1312 aaKnown RBP14.16□□□□□ -0.14
HERC6-207ENST00000506842 NPM3O75607 178 aaKnown RBP14.13□□□□□ -0.15
HERC6-207ENST00000506842 CNKSR2Q8WXI2 1034 aa14.1□□□□□ -0.15
HERC6-207ENST00000506842 EHMT2Q96KQ7 1210 aa14.1□□□□□ -0.15
HERC6-207ENST00000506842 SLC4A1APQ9BWU0 796 aaKnown RBP14.07□□□□□ -0.16
HERC6-207ENST00000506842 MAPK8IP2Q13387 824 aaPredicted RBP13.93□□□□□ -0.18
HERC6-207ENST00000506842 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
HERC6-207ENST00000506842 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
HERC6-207ENST00000506842 RNF216Q9NWF9 866 aaPredicted RBP13.73□□□□□ -0.21
HERC6-207ENST00000506842 DMRT2Q9Y5R5 561 aa13.69□□□□□ -0.22
HERC6-207ENST00000506842 HOXD11P31277 338 aaPredicted RBP13.59□□□□□ -0.23
HERC6-207ENST00000506842 ZBTB22O15209 634 aa13.57□□□□□ -0.24
HERC6-207ENST00000506842 FOXD4L1Q9NU39 408 aa13.43□□□□□ -0.26
HERC6-207ENST00000506842 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
HERC6-207ENST00000506842 POTEDQ86YR6 584 aa13.1□□□□□ -0.31
HERC6-207ENST00000506842 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
HERC6-207ENST00000506842 DCAF8L1A6NGE4 600 aa12.96□□□□□ -0.33
HERC6-207ENST00000506842 ATXN8OSP0DMR3 200 aa12.96□□□□□ -0.33
HERC6-207ENST00000506842 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.35
HERC6-207ENST00000506842 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
HERC6-207ENST00000506842 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.71□□□□□ -0.37
HERC6-207ENST00000506842 HNRNPUL2Q1KMD3 747 aaKnown RBP12.71□□□□□ -0.37
HERC6-207ENST00000506842 SAMD1Q6SPF0 538 aaPredicted RBP12.7□□□□□ -0.38
HERC6-207ENST00000506842 ATF5Q9Y2D1 282 aaPredicted RBP12.66□□□□□ -0.38
HERC6-207ENST00000506842 APLP2Q06481 763 aa12.47□□□□□ -0.41
HERC6-207ENST00000506842 FKBP8Q14318 412 aa12.43□□□□□ -0.42
HERC6-207ENST00000506842 ZNF219Q9P2Y4 722 aaPredicted RBP12.4□□□□□ -0.42
HERC6-207ENST00000506842 RNF39Q9H2S5 420 aa12.37□□□□□ -0.43
HERC6-207ENST00000506842 SPINK5Q9NQ38 1064 aaPredicted RBP12.26□□□□□ -0.45
HERC6-207ENST00000506842 C1QBPQ07021 282 aaKnown RBP12.24□□□□□ -0.45
HERC6-207ENST00000506842 TRHP20396 242 aaPredicted RBP12.18□□□□□ -0.46
HERC6-207ENST00000506842 CAPN15O75808 1086 aa12.15□□□□□ -0.46
HERC6-207ENST00000506842 MKRN4PQ13434 485 aaPredicted RBP12.15□□□□□ -0.46
HERC6-207ENST00000506842 POLA2Q14181 598 aa12.11□□□□□ -0.47
HERC6-207ENST00000506842 AMER1Q5JTC6 1135 aaPredicted RBP12.08□□□□□ -0.48
HERC6-207ENST00000506842 FBLN2P98095 1184 aa12.07□□□□□ -0.48
HERC6-207ENST00000506842 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
HERC6-207ENST00000506842 SPDYE4A6NLX3 237 aa12.04□□□□□ -0.48
HERC6-207ENST00000506842 PROM2Q8N271 834 aa11.99□□□□□ -0.49
HERC6-207ENST00000506842 ZBTB12Q9Y330 459 aaPredicted RBP11.96□□□□□ -0.49
HERC6-207ENST00000506842 ABCB7O75027 752 aa11.95□□□□□ -0.5
HERC6-207ENST00000506842 DSG3P32926 999 aa11.91□□□□□ -0.5
HERC6-207ENST00000506842 FBXO3Q9UK99 471 aa11.89□□□□□ -0.51
HERC6-207ENST00000506842 VASPP50552 380 aaPredicted RBP11.73□□□□□ -0.53
HERC6-207ENST00000506842 SPDYE2BA6NHP3 402 aa11.69□□□□□ -0.54
HERC6-207ENST00000506842 SPDYE6P0CI01 402 aa11.69□□□□□ -0.54
HERC6-207ENST00000506842 CACNB1Q02641 598 aaPredicted RBP11.69□□□□□ -0.54
HERC6-207ENST00000506842 SPDYE2Q495Y8 402 aa11.69□□□□□ -0.54
HERC6-207ENST00000506842 OSCARQ8IYS5 282 aa11.69□□□□□ -0.54
HERC6-207ENST00000506842 ZNF692Q9BU19 519 aaPredicted RBP11.67□□□□□ -0.54
HERC6-207ENST00000506842 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
HERC6-207ENST00000506842 IFNLR1Q8IU57 520 aaPredicted RBP11.6□□□□□ -0.55
HERC6-207ENST00000506842 SLC24A1O60721 1099 aa11.55□□□□□ -0.56
HERC6-207ENST00000506842 PABPN1Q86U42 306 aaKnown RBP eCLIP11.53□□□□□ -0.56
HERC6-207ENST00000506842 STAG3Q9UJ98 1225 aa11.53□□□□□ -0.56
HERC6-207ENST00000506842 PKD2Q13563 968 aa11.39□□□□□ -0.59
HERC6-207ENST00000506842 SPOCK2Q92563 424 aa11.39□□□□□ -0.59
HERC6-207ENST00000506842 KLHL34Q8N239 644 aa11.37□□□□□ -0.59
HERC6-207ENST00000506842 PLCD3Q8N3E9 789 aa11.36□□□□□ -0.59
HERC6-207ENST00000506842 MIER1Q8N108 512 aa11.33□□□□□ -0.6
HERC6-207ENST00000506842 RBM42Q9BTD8 480 aaKnown RBP11.31□□□□□ -0.6
HERC6-207ENST00000506842 AKT1S1Q96B36 256 aa11.29□□□□□ -0.6
HERC6-207ENST00000506842 ZBTB47Q9UFB7 747 aaPredicted RBP11.24□□□□□ -0.61
HERC6-207ENST00000506842 PLEKHG5O94827 1062 aa11.23□□□□□ -0.61
HERC6-207ENST00000506842 SPDYE1Q8NFV5 336 aaPredicted RBP11.23□□□□□ -0.61
HERC6-207ENST00000506842 ECM2O94769 699 aaPredicted RBP11.19□□□□□ -0.62
HERC6-207ENST00000506842 REM2Q8IYK8 340 aaPredicted RBP11.17□□□□□ -0.62
HERC6-207ENST00000506842 DCAF8L2P0C7V8 631 aa11.16□□□□□ -0.62
HERC6-207ENST00000506842 PLCB2Q00722 1185 aa11.16□□□□□ -0.62
HERC6-207ENST00000506842 RGL2O15211 777 aa11.1□□□□□ -0.63
HERC6-207ENST00000506842 CREBZFQ9NS37 354 aa11.09□□□□□ -0.63
HERC6-207ENST00000506842 CIZ1Q9ULV3 898 aaPredicted RBP11.09□□□□□ -0.63
HERC6-207ENST00000506842 CLEC11AQ9Y240 323 aa11.09□□□□□ -0.63
HERC6-207ENST00000506842 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
HERC6-207ENST00000506842 NUBP1P53384 320 aa11.08□□□□□ -0.64
HERC6-207ENST00000506842 TRIM41Q8WV44 630 aa11.08□□□□□ -0.64
HERC6-207ENST00000506842 MNX1P50219 401 aaPredicted RBP11.06□□□□□ -0.64
HERC6-207ENST00000506842 NPM1P06748 294 aaKnown RBP eCLIP11.04□□□□□ -0.64
HERC6-207ENST00000506842 PITPNM1O00562 1244 aa11.03□□□□□ -0.64
HERC6-207ENST00000506842 BBXQ8WY36 941 aaPredicted RBP11.03□□□□□ -0.64
HERC6-207ENST00000506842 GSE1Q14687 1217 aa11.02□□□□□ -0.65
HERC6-207ENST00000506842 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.96□□□□□ -0.65
HERC6-207ENST00000506842 HAP1P54257 671 aaPredicted RBP10.94□□□□□ -0.66
HERC6-207ENST00000506842 DCAF8Q5TAQ9 597 aa10.93□□□□□ -0.66
HERC6-207ENST00000506842 RNF25Q96BH1 459 aaPredicted RBP10.93□□□□□ -0.66
HERC6-207ENST00000506842 FAM212AQ96EL1 285 aa10.93□□□□□ -0.66
HERC6-207ENST00000506842 RASEFQ8IZ41 740 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms