RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 CFAP44Q96MT7 982 aa17.83■□□□□ 0.45
SERF1B-204ENST00000506542 EXOSC9Q06265 439 aaKnown RBP17.82■□□□□ 0.44
SERF1B-204ENST00000506542 NFIXQ14938 502 aa17.82■□□□□ 0.44
SERF1B-204ENST00000506542 PROSER3Q2NL68 480 aa17.82■□□□□ 0.44
SERF1B-204ENST00000506542 KIAA1551Q9HCM1 1747 aa17.81■□□□□ 0.44
SERF1B-204ENST00000506542 DZIP3Q86Y13 1208 aaKnown RBP17.81■□□□□ 0.44
SERF1B-204ENST00000506542 CAMTA2O94983 1202 aa17.8■□□□□ 0.44
SERF1B-204ENST00000506542 TM4SF1P30408 202 aa17.8■□□□□ 0.44
SERF1B-204ENST00000506542 TBC1D9BQ66K14 1250 aa17.8■□□□□ 0.44
SERF1B-204ENST00000506542 PELP1Q8IZL8 1130 aaKnown RBP17.8■□□□□ 0.44
SERF1B-204ENST00000506542 KIF13BQ9NQT8 1826 aa17.8■□□□□ 0.44
SERF1B-204ENST00000506542 POLRMTO00411 1230 aaKnown RBP17.8■□□□□ 0.44
SERF1B-204ENST00000506542 ELL2O00472 640 aaPredicted RBP17.8■□□□□ 0.44
SERF1B-204ENST00000506542 BCAR3O75815 825 aa17.8■□□□□ 0.44
SERF1B-204ENST00000506542 RARSP54136 660 aaKnown RBP17.8■□□□□ 0.44
SERF1B-204ENST00000506542 CCDC24Q8N4L8 307 aa17.8■□□□□ 0.44
SERF1B-204ENST00000506542 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.8■□□□□ 0.44
SERF1B-204ENST00000506542 PARP3Q9Y6F1 533 aa17.8■□□□□ 0.44
SERF1B-204ENST00000506542 PLIN1O60240 522 aa17.79■□□□□ 0.44
SERF1B-204ENST00000506542 PDIA6Q15084 440 aa17.79■□□□□ 0.44
SERF1B-204ENST00000506542 TTLL7Q6ZT98 887 aa17.79■□□□□ 0.44
SERF1B-204ENST00000506542 HLFQ16534 295 aa17.78■□□□□ 0.44
SERF1B-204ENST00000506542 BABAM1Q9NWV8 329 aa17.78■□□□□ 0.44
SERF1B-204ENST00000506542 C10orf71Q711Q0 1435 aa17.78■□□□□ 0.44
SERF1B-204ENST00000506542 A0A087WZG4 1122 aa17.77■□□□□ 0.44
SERF1B-204ENST00000506542 NUP98P52948 1817 aa17.77■□□□□ 0.43
SERF1B-204ENST00000506542 YBX3P16989 372 aaKnown RBP eCLIP17.77■□□□□ 0.43
SERF1B-204ENST00000506542 C8orf58Q8NAV2 365 aa17.77■□□□□ 0.43
SERF1B-204ENST00000506542 CD2APQ9Y5K6 639 aa17.77■□□□□ 0.43
SERF1B-204ENST00000506542 CARMIL3Q8ND23 1372 aa17.77■□□□□ 0.43
SERF1B-204ENST00000506542 A0A0G2JLW4 131 aa17.76■□□□□ 0.43
SERF1B-204ENST00000506542 LRP10Q7Z4F1 713 aa17.76■□□□□ 0.43
SERF1B-204ENST00000506542 NPM2Q86SE8 214 aaKnown RBP17.76■□□□□ 0.43
SERF1B-204ENST00000506542 NRXN2Q9P2S2 1712 aa17.76■□□□□ 0.43
SERF1B-204ENST00000506542 PXDNLA1KZ92 1463 aa17.75■□□□□ 0.43
SERF1B-204ENST00000506542 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
SERF1B-204ENST00000506542 ZNF428Q96B54 188 aa17.75■□□□□ 0.43
SERF1B-204ENST00000506542 ZBTB3Q9H5J0 574 aa17.75■□□□□ 0.43
SERF1B-204ENST00000506542 ANKRD31Q8N7Z5 1873 aa17.74■□□□□ 0.43
SERF1B-204ENST00000506542 SERPINB2P05120 415 aa17.74■□□□□ 0.43
SERF1B-204ENST00000506542 PPP4R2Q9NY27 417 aa17.74■□□□□ 0.43
SERF1B-204ENST00000506542 CHPF2Q9P2E5 772 aa17.74■□□□□ 0.43
SERF1B-204ENST00000506542 FAM177BA6PVY3 158 aa17.74■□□□□ 0.43
SERF1B-204ENST00000506542 GPR162Q16538 588 aa17.74■□□□□ 0.43
SERF1B-204ENST00000506542 TCERG1O14776 1098 aaKnown RBP17.73■□□□□ 0.43
SERF1B-204ENST00000506542 DPEP1P16444 411 aa17.73■□□□□ 0.43
SERF1B-204ENST00000506542 CHRNA5P30532 468 aa17.73■□□□□ 0.43
SERF1B-204ENST00000506542 AIMP1Q12904 312 aaKnown RBP17.73■□□□□ 0.43
SERF1B-204ENST00000506542 HDGFL1Q5TGJ6 251 aa17.73■□□□□ 0.43
SERF1B-204ENST00000506542 BRCA1P38398 1863 aaKnown RBP17.72■□□□□ 0.43
SERF1B-204ENST00000506542 VAMP4O75379 141 aa17.72■□□□□ 0.43
SERF1B-204ENST00000506542 ALDH1L2Q3SY69 923 aa17.72■□□□□ 0.43
SERF1B-204ENST00000506542 TWISTNBQ3B726 338 aaPredicted RBP17.71■□□□□ 0.43
SERF1B-204ENST00000506542 C20orf194Q5TEA3 1177 aa17.71■□□□□ 0.43
SERF1B-204ENST00000506542 SSH1Q8WYL5 1049 aa17.71■□□□□ 0.43
SERF1B-204ENST00000506542 BCL2L13Q9BXK5 485 aa17.71■□□□□ 0.43
SERF1B-204ENST00000506542 EXOC6Q8TAG9 804 aa17.71■□□□□ 0.42
SERF1B-204ENST00000506542 XAGE3Q8WTP9 111 aa17.71■□□□□ 0.42
SERF1B-204ENST00000506542 SMC4Q9NTJ3 1288 aa17.71■□□□□ 0.42
SERF1B-204ENST00000506542 KCNA3P22001 575 aa17.7■□□□□ 0.42
SERF1B-204ENST00000506542 GPTP24298 496 aa17.7■□□□□ 0.42
SERF1B-204ENST00000506542 PDE3AQ14432 1141 aa17.7■□□□□ 0.42
SERF1B-204ENST00000506542 COPS6Q7L5N1 327 aa17.7■□□□□ 0.42
SERF1B-204ENST00000506542 SETDB2Q96T68 719 aa17.7■□□□□ 0.42
SERF1B-204ENST00000506542 NIP7Q9Y221 180 aaKnown RBP eCLIP17.7■□□□□ 0.42
SERF1B-204ENST00000506542 MAP3K15Q6ZN16 1313 aa17.7■□□□□ 0.42
SERF1B-204ENST00000506542 CACNA1FO60840 1977 aa17.7■□□□□ 0.42
SERF1B-204ENST00000506542 COL11A2P13942 1736 aaPredicted RBP17.69■□□□□ 0.42
SERF1B-204ENST00000506542 PRR5LQ6MZQ0 368 aa17.69■□□□□ 0.42
SERF1B-204ENST00000506542 KIF6Q6ZMV9 814 aa17.69■□□□□ 0.42
SERF1B-204ENST00000506542 CRBNQ96SW2 442 aa17.69■□□□□ 0.42
SERF1B-204ENST00000506542 BRPF1P55201 1214 aaPredicted RBP17.68■□□□□ 0.42
SERF1B-204ENST00000506542 ERBB4Q15303 1308 aa17.68■□□□□ 0.42
SERF1B-204ENST00000506542 FRAT1Q92837 279 aaPredicted RBP17.67■□□□□ 0.42
SERF1B-204ENST00000506542 DDX21Q9NR30 783 aaKnown RBP eCLIP17.67■□□□□ 0.42
SERF1B-204ENST00000506542 UBN2Q6ZU65 1347 aa17.67■□□□□ 0.42
SERF1B-204ENST00000506542 CACNA1SQ13698 1873 aa17.67■□□□□ 0.42
SERF1B-204ENST00000506542 PHAXQ9H814 394 aaKnown RBP17.67■□□□□ 0.42
SERF1B-204ENST00000506542 KIF16BQ96L93 1317 aa17.66■□□□□ 0.42
SERF1B-204ENST00000506542 DCAF8L1A6NGE4 600 aa17.66■□□□□ 0.42
SERF1B-204ENST00000506542 CLEC4GQ6UXB4 293 aa17.66■□□□□ 0.42
SERF1B-204ENST00000506542 NBPF5PQ86XG9 351 aaPredicted RBP17.66■□□□□ 0.42
SERF1B-204ENST00000506542 ZNF652Q9Y2D9 606 aa17.66■□□□□ 0.42
SERF1B-204ENST00000506542 ANKRD36CQ5JPF3 1778 aa17.66■□□□□ 0.42
SERF1B-204ENST00000506542 TNRC6CQ9HCJ0 1690 aaKnown RBP17.65■□□□□ 0.42
SERF1B-204ENST00000506542 HOXB7P09629 217 aa17.65■□□□□ 0.42
SERF1B-204ENST00000506542 TGFB2P61812 414 aa17.65■□□□□ 0.42
SERF1B-204ENST00000506542 ZKSCAN2Q63HK3 967 aa17.65■□□□□ 0.42
SERF1B-204ENST00000506542 NUTM1Q86Y26 1132 aa17.65■□□□□ 0.42
SERF1B-204ENST00000506542 CNBD1Q8NA66 436 aa17.65■□□□□ 0.42
SERF1B-204ENST00000506542 BCS1LQ9Y276 419 aa17.65■□□□□ 0.42
SERF1B-204ENST00000506542 CHD4Q14839 1912 aa17.65■□□□□ 0.42
SERF1B-204ENST00000506542 DLEC1Q9Y238 1755 aa17.65■□□□□ 0.42
SERF1B-204ENST00000506542 ERVV-1B6SEH8 477 aa17.64■□□□□ 0.42
SERF1B-204ENST00000506542 NPHP1O15259 732 aa17.64■□□□□ 0.42
SERF1B-204ENST00000506542 DBF4Q9UBU7 674 aaPredicted RBP17.64■□□□□ 0.42
SERF1B-204ENST00000506542 ARFGEF2Q9Y6D5 1785 aa17.64■□□□□ 0.42
SERF1B-204ENST00000506542 GIGYF2Q6Y7W6 1299 aaKnown RBP17.64■□□□□ 0.41
SERF1B-204ENST00000506542 MRPL50Q8N5N7 158 aaKnown RBP17.64■□□□□ 0.41
SERF1B-204ENST00000506542 ABCC12Q96J65 1359 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms