RNA–Protein interactions for RNA: ENST00000504274.1

COPS4-203, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 2

Gene COPS4, Length 457 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-203ENST00000504274 SUSD3Q96L08 255 aa9.62□□□□□ -0.87
COPS4-203ENST00000504274 GPR25O00155 361 aa9.61□□□□□ -0.87
COPS4-203ENST00000504274 PTCD1O75127 700 aaKnown RBP9.61□□□□□ -0.87
COPS4-203ENST00000504274 DGKZQ13574 1117 aa9.61□□□□□ -0.87
COPS4-203ENST00000504274 EFHC2Q5JST6 749 aa9.61□□□□□ -0.87
COPS4-203ENST00000504274 ZCCHC2Q9C0B9 1178 aaKnown RBP9.61□□□□□ -0.87
COPS4-203ENST00000504274 TNFRSF10BO14763 440 aa9.6□□□□□ -0.87
COPS4-203ENST00000504274 VSIG8P0DPA2 414 aa9.6□□□□□ -0.87
COPS4-203ENST00000504274 LBRQ14739 615 aaKnown RBP9.6□□□□□ -0.87
COPS4-203ENST00000504274 FAM26DQ5JW98 314 aa9.6□□□□□ -0.87
COPS4-203ENST00000504274 C16orf46Q6P387 395 aa9.6□□□□□ -0.87
COPS4-203ENST00000504274 NLRP8Q86W28 1048 aa9.6□□□□□ -0.87
COPS4-203ENST00000504274 SLC16A10Q8TF71 515 aa9.6□□□□□ -0.87
COPS4-203ENST00000504274 GMCL1Q96IK5 515 aa9.6□□□□□ -0.87
COPS4-203ENST00000504274 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.6□□□□□ -0.87
COPS4-203ENST00000504274 HCN2Q9UL51 889 aa9.6□□□□□ -0.87
COPS4-203ENST00000504274 GPC6Q9Y625 555 aaPredicted RBP9.6□□□□□ -0.87
COPS4-203ENST00000504274 BNIP3LO60238 219 aa9.58□□□□□ -0.88
COPS4-203ENST00000504274 WFS1O76024 890 aa9.58□□□□□ -0.88
COPS4-203ENST00000504274 PDIA4P13667 645 aaKnown RBP9.58□□□□□ -0.88
COPS4-203ENST00000504274 C11orf91Q3C1V1 193 aa9.58□□□□□ -0.88
COPS4-203ENST00000504274 LCE2AQ5TA79 106 aaPredicted RBP9.58□□□□□ -0.88
COPS4-203ENST00000504274 B4GALNT3Q6L9W6 998 aa9.58□□□□□ -0.88
COPS4-203ENST00000504274 TREML4Q6UXN2 200 aa9.58□□□□□ -0.88
COPS4-203ENST00000504274 GTF3C2Q8WUA4 911 aaPredicted RBP9.58□□□□□ -0.88
COPS4-203ENST00000504274 NEUROD4Q9HD90 331 aa9.58□□□□□ -0.88
COPS4-203ENST00000504274 NDFIP2Q9NV92 336 aa9.58□□□□□ -0.88
COPS4-203ENST00000504274 GJA3Q9Y6H8 435 aa9.58□□□□□ -0.88
COPS4-203ENST00000504274 DNMT3AQ9Y6K1 912 aaPredicted RBP9.58□□□□□ -0.88
COPS4-203ENST00000504274 ATXN7O15265 892 aaPredicted RBP9.57□□□□□ -0.88
COPS4-203ENST00000504274 BRD1O95696 1058 aa9.57□□□□□ -0.88
COPS4-203ENST00000504274 MTMR3Q13615 1198 aa9.57□□□□□ -0.88
COPS4-203ENST00000504274 GAS6Q14393 721 aa9.57□□□□□ -0.88
COPS4-203ENST00000504274 TXNDC2Q86VQ3 553 aa9.57□□□□□ -0.88
COPS4-203ENST00000504274 IRF7Q92985 503 aa9.57□□□□□ -0.88
COPS4-203ENST00000504274 ABHD17AQ96GS6 310 aa9.57□□□□□ -0.88
COPS4-203ENST00000504274 DMGDHQ9UI17 866 aaKnown RBP9.57□□□□□ -0.88
COPS4-203ENST00000504274 PCDHGC4Q9Y5F7 938 aa9.57□□□□□ -0.88
COPS4-203ENST00000504274 SERPINB4P48594 390 aa9.56□□□□□ -0.88
COPS4-203ENST00000504274 RNFT1Q5M7Z0 435 aa9.56□□□□□ -0.88
COPS4-203ENST00000504274 IFT43Q96FT9 208 aa9.56□□□□□ -0.88
COPS4-203ENST00000504274 ANO2Q9NQ90 1003 aa9.56□□□□□ -0.88
COPS4-203ENST00000504274 DCDC2BA2VCK2 349 aa9.55□□□□□ -0.88
COPS4-203ENST00000504274 TGFBR3LH3BV60 316 aa9.55□□□□□ -0.88
COPS4-203ENST00000504274 ARID4AP29374 1257 aaPredicted RBP9.55□□□□□ -0.88
COPS4-203ENST00000504274 GMPRP36959 345 aa9.55□□□□□ -0.88
COPS4-203ENST00000504274 KRT76Q01546 638 aa9.55□□□□□ -0.88
COPS4-203ENST00000504274 TNP2Q05952 138 aa9.55□□□□□ -0.88
COPS4-203ENST00000504274 SAMD5Q5TGI4 173 aa9.55□□□□□ -0.88
COPS4-203ENST00000504274 FIGNL1Q6PIW4 674 aa9.55□□□□□ -0.88
COPS4-203ENST00000504274 HOMEZQ8IX15 550 aa9.55□□□□□ -0.88
COPS4-203ENST00000504274 ETFBKMTQ8IXQ9 262 aa9.55□□□□□ -0.88
COPS4-203ENST00000504274 COL25A1Q9BXS0 654 aaPredicted RBP9.55□□□□□ -0.88
COPS4-203ENST00000504274 STRN4Q9NRL3 753 aa9.55□□□□□ -0.88
COPS4-203ENST00000504274 ANKIB1Q9P2G1 1089 aa9.55□□□□□ -0.88
COPS4-203ENST00000504274 KHNYNO15037 678 aaKnown RBP9.54□□□□□ -0.88
COPS4-203ENST00000504274 ZNF211Q13398 564 aaPredicted RBP9.54□□□□□ -0.88
COPS4-203ENST00000504274 BTLAQ7Z6A9 289 aa9.54□□□□□ -0.88
COPS4-203ENST00000504274 ZBTB39O15060 712 aa9.53□□□□□ -0.88
COPS4-203ENST00000504274 EFSO43281 561 aa9.53□□□□□ -0.88
COPS4-203ENST00000504274 ABL1P00519 1130 aa9.53□□□□□ -0.88
COPS4-203ENST00000504274 FAM157BP0CG42 384 aa9.53□□□□□ -0.88
COPS4-203ENST00000504274 MAPTP10636 758 aaKnown RBP9.53□□□□□ -0.88
COPS4-203ENST00000504274 TYRO3Q06418 890 aa9.53□□□□□ -0.88
COPS4-203ENST00000504274 GRIN2CQ14957 1233 aa9.53□□□□□ -0.88
COPS4-203ENST00000504274 FOXR1Q6PIV2 292 aa9.53□□□□□ -0.88
COPS4-203ENST00000504274 HELQQ8TDG4 1101 aa9.53□□□□□ -0.88
COPS4-203ENST00000504274 TRERF1Q96PN7 1200 aa9.53□□□□□ -0.88
COPS4-203ENST00000504274 MICAL2O94851 1124 aa9.52□□□□□ -0.89
COPS4-203ENST00000504274 SFSWAPQ12872 951 aaKnown RBP9.52□□□□□ -0.89
COPS4-203ENST00000504274 IER5Q5VY09 327 aa9.52□□□□□ -0.89
COPS4-203ENST00000504274 CEP63Q96MT8 703 aa9.52□□□□□ -0.89
COPS4-203ENST00000504274 CFHR5Q9BXR6 569 aa9.52□□□□□ -0.89
COPS4-203ENST00000504274 STIM2Q9P246 746 aa9.52□□□□□ -0.89
COPS4-203ENST00000504274 ATXN7L1Q9ULK2 861 aaPredicted RBP9.52□□□□□ -0.89
COPS4-203ENST00000504274 OPLAHO14841 1288 aa9.51□□□□□ -0.89
COPS4-203ENST00000504274 CD33P20138 364 aa9.51□□□□□ -0.89
COPS4-203ENST00000504274 BRD2P25440 801 aaKnown RBP9.51□□□□□ -0.89
COPS4-203ENST00000504274 GRNP28799 593 aaKnown RBP9.51□□□□□ -0.89
COPS4-203ENST00000504274 IDH3AP50213 366 aa9.51□□□□□ -0.89
COPS4-203ENST00000504274 CTBSQ01459 385 aa9.51□□□□□ -0.89
COPS4-203ENST00000504274 HIF1AQ16665 826 aa9.51□□□□□ -0.89
COPS4-203ENST00000504274 TREML1Q86YW5 311 aa9.51□□□□□ -0.89
COPS4-203ENST00000504274 FGFR3P22607 806 aa9.5□□□□□ -0.89
COPS4-203ENST00000504274 INPP5BP32019 993 aa9.5□□□□□ -0.89
COPS4-203ENST00000504274 CNTNAP3BQ96NU0 1288 aa9.5□□□□□ -0.89
COPS4-203ENST00000504274 CNTNAP3Q9BZ76 1288 aa9.5□□□□□ -0.89
COPS4-203ENST00000504274 BRD7Q9NPI1 651 aa9.5□□□□□ -0.89
COPS4-203ENST00000504274 MTMR7Q9Y216 660 aa9.5□□□□□ -0.89
COPS4-203ENST00000504274 GNEQ9Y223 722 aaKnown RBP9.5□□□□□ -0.89
COPS4-203ENST00000504274 USP20Q9Y2K6 914 aa9.5□□□□□ -0.89
COPS4-203ENST00000504274 C2CD2LO14523 706 aa9.49□□□□□ -0.89
COPS4-203ENST00000504274 MPSTP25325 297 aa9.49□□□□□ -0.89
COPS4-203ENST00000504274 AEBP1Q8IUX7 1158 aa9.49□□□□□ -0.89
COPS4-203ENST00000504274 PHF24Q9UPV7 400 aa9.49□□□□□ -0.89
COPS4-203ENST00000504274 FKBP4Q02790 459 aaKnown RBP eCLIP9.48□□□□□ -0.89
COPS4-203ENST00000504274 KCNA1Q09470 495 aa9.48□□□□□ -0.89
COPS4-203ENST00000504274 ECM1Q16610 540 aa9.48□□□□□ -0.89
COPS4-203ENST00000504274 ATCAYQ86WG3 371 aa9.48□□□□□ -0.89
COPS4-203ENST00000504274 CCER1Q8TC90 406 aaPredicted RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms