RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 LRP10Q7Z4F1 713 aa29.48■■■□□ 2.31
SNIP1-203ENST00000493916 PIM2Q9P1W9 311 aa29.48■■■□□ 2.31
SNIP1-203ENST00000493916 DLEC1Q9Y238 1755 aa29.48■■■□□ 2.31
SNIP1-203ENST00000493916 MAP3K15Q6ZN16 1313 aa29.47■■■□□ 2.31
SNIP1-203ENST00000493916 CHRNA5P30532 468 aa29.47■■■□□ 2.31
SNIP1-203ENST00000493916 GNAI1P63096 354 aa29.47■■■□□ 2.31
SNIP1-203ENST00000493916 PRR5LQ6MZQ0 368 aa29.47■■■□□ 2.31
SNIP1-203ENST00000493916 KIF6Q6ZMV9 814 aa29.47■■■□□ 2.31
SNIP1-203ENST00000493916 NGEFQ8N5V2 710 aa29.47■■■□□ 2.31
SNIP1-203ENST00000493916 BCS1LQ9Y276 419 aa29.47■■■□□ 2.31
SNIP1-203ENST00000493916 HLFQ16534 295 aa29.46■■■□□ 2.31
SNIP1-203ENST00000493916 CNBD1Q8NA66 436 aa29.46■■■□□ 2.31
SNIP1-203ENST00000493916 ANKRD31Q8N7Z5 1873 aa29.46■■■□□ 2.31
SNIP1-203ENST00000493916 ARFGEF1Q9Y6D6 1849 aa29.45■■■□□ 2.31
SNIP1-203ENST00000493916 TTLL7Q6ZT98 887 aa29.45■■■□□ 2.31
SNIP1-203ENST00000493916 BRIP1Q9BX63 1249 aa29.45■■■□□ 2.31
SNIP1-203ENST00000493916 ATP10DQ9P241 1426 aa29.45■■■□□ 2.3
SNIP1-203ENST00000493916 NIP7Q9Y221 180 aaKnown RBP eCLIP29.44■■■□□ 2.3
SNIP1-203ENST00000493916 PROSER3Q2NL68 480 aa29.43■■■□□ 2.3
SNIP1-203ENST00000493916 DALRD3Q5D0E6 543 aaKnown RBP29.43■■■□□ 2.3
SNIP1-203ENST00000493916 PDZRN3Q9UPQ7 1066 aa29.43■■■□□ 2.3
SNIP1-203ENST00000493916 ST5P78524 1137 aa29.42■■■□□ 2.3
SNIP1-203ENST00000493916 NBPF5PQ86XG9 351 aaPredicted RBP29.42■■■□□ 2.3
SNIP1-203ENST00000493916 NUP98P52948 1817 aa29.41■■■□□ 2.3
SNIP1-203ENST00000493916 PDE6BP35913 854 aa29.41■■■□□ 2.3
SNIP1-203ENST00000493916 C2CD5Q86YS7 1000 aa29.41■■■□□ 2.3
SNIP1-203ENST00000493916 DDX21Q9NR30 783 aaKnown RBP eCLIP29.41■■■□□ 2.3
SNIP1-203ENST00000493916 NPHP1O15259 732 aa29.4■■■□□ 2.3
SNIP1-203ENST00000493916 HDGFL1Q5TGJ6 251 aa29.4■■■□□ 2.3
SNIP1-203ENST00000493916 DUSP27Q5VZP5 1158 aa29.4■■■□□ 2.3
SNIP1-203ENST00000493916 WWC1Q8IX03 1113 aa29.4■■■□□ 2.3
SNIP1-203ENST00000493916 NECTIN2Q92692 538 aa29.4■■■□□ 2.3
SNIP1-203ENST00000493916 ZBTB3Q9H5J0 574 aa29.4■■■□□ 2.3
SNIP1-203ENST00000493916 COL11A2P13942 1736 aaPredicted RBP29.4■■■□□ 2.3
SNIP1-203ENST00000493916 H0YIN7 160 aa29.39■■■□□ 2.3
SNIP1-203ENST00000493916 ANXA1P04083 346 aa29.39■■■□□ 2.3
SNIP1-203ENST00000493916 CCDC24Q8N4L8 307 aa29.38■■■□□ 2.29
SNIP1-203ENST00000493916 ZNF784Q8NCA9 323 aaPredicted RBP29.38■■■□□ 2.29
SNIP1-203ENST00000493916 TPTE2Q6XPS3 522 aa29.37■■■□□ 2.29
SNIP1-203ENST00000493916 GIGYF2Q6Y7W6 1299 aaKnown RBP29.37■■■□□ 2.29
SNIP1-203ENST00000493916 CHPF2Q9P2E5 772 aa29.37■■■□□ 2.29
SNIP1-203ENST00000493916 IBTKQ9P2D0 1353 aaPredicted RBP29.37■■■□□ 2.29
SNIP1-203ENST00000493916 IL16Q14005 1332 aa29.36■■■□□ 2.29
SNIP1-203ENST00000493916 DBF4Q9UBU7 674 aaPredicted RBP29.35■■■□□ 2.29
SNIP1-203ENST00000493916 ADCY9O60503 1353 aa29.35■■■□□ 2.29
SNIP1-203ENST00000493916 SENP3-EIF4A1A0A087X0R7 540 aa29.34■■■□□ 2.29
SNIP1-203ENST00000493916 COPS6Q7L5N1 327 aa29.34■■■□□ 2.29
SNIP1-203ENST00000493916 ZNF34Q8IZ26 560 aa29.34■■■□□ 2.29
SNIP1-203ENST00000493916 FAM9BQ8IZU0 186 aa29.34■■■□□ 2.29
SNIP1-203ENST00000493916 TTLL6Q8N841 843 aa29.34■■■□□ 2.29
SNIP1-203ENST00000493916 XAGE3Q8WTP9 111 aa29.34■■■□□ 2.29
SNIP1-203ENST00000493916 ARHGAP27Q6ZUM4 889 aa29.33■■■□□ 2.29
SNIP1-203ENST00000493916 NYXQ9GZU5 481 aa29.33■■■□□ 2.29
SNIP1-203ENST00000493916 UBN2Q6ZU65 1347 aa29.33■■■□□ 2.29
SNIP1-203ENST00000493916 C8orf58Q8NAV2 365 aa29.31■■■□□ 2.28
SNIP1-203ENST00000493916 RIC1Q4ADV7 1423 aa29.3■■■□□ 2.28
SNIP1-203ENST00000493916 KLRG2A4D1S0 409 aaPredicted RBP29.3■■■□□ 2.28
SNIP1-203ENST00000493916 FAM177BA6PVY3 158 aa29.3■■■□□ 2.28
SNIP1-203ENST00000493916 SRGNP10124 158 aa29.3■■■□□ 2.28
SNIP1-203ENST00000493916 GPTP24298 496 aa29.3■■■□□ 2.28
SNIP1-203ENST00000493916 AIMP1Q12904 312 aaKnown RBP29.3■■■□□ 2.28
SNIP1-203ENST00000493916 STYK1Q6J9G0 422 aa29.3■■■□□ 2.28
SNIP1-203ENST00000493916 HYPKQ9NX55 129 aa29.3■■■□□ 2.28
SNIP1-203ENST00000493916 ANKRD36CQ5JPF3 1778 aa29.3■■■□□ 2.28
SNIP1-203ENST00000493916 PARP10Q53GL7 1025 aa29.29■■■□□ 2.28
SNIP1-203ENST00000493916 WDR63Q8IWG1 891 aa29.29■■■□□ 2.28
SNIP1-203ENST00000493916 TSR2Q969E8 191 aaKnown RBP29.29■■■□□ 2.28
SNIP1-203ENST00000493916 ZNF622Q969S3 477 aaKnown RBP eCLIP29.29■■■□□ 2.282e-9■□□□□ 10.5
SNIP1-203ENST00000493916 HSP90AB3PQ58FF7 597 aa29.28■■■□□ 2.28
SNIP1-203ENST00000493916 MASTLQ96GX5 879 aa29.28■■■□□ 2.28
SNIP1-203ENST00000493916 CHMP4AQ9BY43 222 aa29.28■■■□□ 2.28
SNIP1-203ENST00000493916 ARFGEF2Q9Y6D5 1785 aa29.28■■■□□ 2.28
SNIP1-203ENST00000493916 ABCC12Q96J65 1359 aa29.27■■■□□ 2.28
SNIP1-203ENST00000493916 ELL2O00472 640 aaPredicted RBP29.27■■■□□ 2.28
SNIP1-203ENST00000493916 GTF2E1P29083 439 aaPredicted RBP29.27■■■□□ 2.28
SNIP1-203ENST00000493916 SUSD4Q5VX71 490 aa29.27■■■□□ 2.28
SNIP1-203ENST00000493916 TNRC6CQ9HCJ0 1690 aaKnown RBP29.27■■■□□ 2.28
SNIP1-203ENST00000493916 NTSR2O95665 410 aa29.26■■■□□ 2.27
SNIP1-203ENST00000493916 CNKSR1Q969H4 720 aa29.26■■■□□ 2.27
SNIP1-203ENST00000493916 PPP1R42Q7Z4L9 355 aa29.25■■■□□ 2.27
SNIP1-203ENST00000493916 PLBD2Q8NHP8 589 aa29.25■■■□□ 2.27
SNIP1-203ENST00000493916 NPR1P16066 1061 aa29.24■■■□□ 2.27
SNIP1-203ENST00000493916 ERFEQ4G0M1 354 aa29.24■■■□□ 2.27
SNIP1-203ENST00000493916 NUTM1Q86Y26 1132 aa29.24■■■□□ 2.27
SNIP1-203ENST00000493916 TSPYL6Q8N831 410 aa29.24■■■□□ 2.27
SNIP1-203ENST00000493916 SALL2Q9Y467 1007 aaPredicted RBP29.24■■■□□ 2.27
SNIP1-203ENST00000493916 TCIRG1Q13488 830 aa29.23■■■□□ 2.27
SNIP1-203ENST00000493916 CCDC30Q5VVM6 783 aa29.23■■■□□ 2.27
SNIP1-203ENST00000493916 ANKRD13DQ6ZTN6 518 aa29.23■■■□□ 2.27
SNIP1-203ENST00000493916 RNF123Q5XPI4 1314 aa29.22■■■□□ 2.27
SNIP1-203ENST00000493916 FANCIQ9NVI1 1328 aa29.22■■■□□ 2.27
SNIP1-203ENST00000493916 CRY2Q49AN0 593 aa29.21■■■□□ 2.27
SNIP1-203ENST00000493916 PRPF40BQ6NWY9 871 aaKnown RBP29.21■■■□□ 2.27
SNIP1-203ENST00000493916 UTP14AQ9BVJ6 771 aaKnown RBP29.21■■■□□ 2.27
SNIP1-203ENST00000493916 CCER2I3L3R5 266 aa29.2■■■□□ 2.26
SNIP1-203ENST00000493916 NLRP10Q86W26 655 aa29.2■■■□□ 2.26
SNIP1-203ENST00000493916 TWISTNBQ3B726 338 aaPredicted RBP29.19■■■□□ 2.26
SNIP1-203ENST00000493916 C9orf131Q5VYM1 1079 aa29.19■■■□□ 2.26
SNIP1-203ENST00000493916 SLX4Q8IY92 1834 aa29.19■■■□□ 2.26
SNIP1-203ENST00000493916 CACNA1SQ13698 1873 aa29.18■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms