RNA–Protein interactions for RNA: ENST00000485758.1

TPRKB-208, Transcript of TP53RK binding protein, human

TSL 2

Gene TPRKB, Length 730 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRKB-208	ENST00000485758	STARD3NL	O95772	234 aa		13.81	□□□□□ -0.2
TPRKB-208	ENST00000485758	TRAPPC3L	Q5T215	181 aa		13.81	□□□□□ -0.2
TPRKB-208	ENST00000485758	TMEM106C	Q9BVX2	250 aa		13.81	□□□□□ -0.2
TPRKB-208	ENST00000485758	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.81	□□□□□ -0.2
TPRKB-208	ENST00000485758	SOS1	Q07889	1333 aa	Predicted RBP	13.81	□□□□□ -0.2
TPRKB-208	ENST00000485758	SCN7A	Q01118	1682 aa		13.8	□□□□□ -0.2
TPRKB-208	ENST00000485758	MSL1	Q68DK7	614 aa		13.8	□□□□□ -0.2
TPRKB-208	ENST00000485758	ARHGEF1	Q92888	912 aa	Known RBP	13.8	□□□□□ -0.2
TPRKB-208	ENST00000485758	BABAM1	Q9NWV8	329 aa		13.8	□□□□□ -0.2
TPRKB-208	ENST00000485758	ZBTB1	Q9Y2K1	713 aa		13.8	□□□□□ -0.2
TPRKB-208	ENST00000485758	BCOR	Q6W2J9	1755 aa		13.79	□□□□□ -0.2
TPRKB-208	ENST00000485758	SNRPA1	P09661	255 aa	Known RBP	13.79	□□□□□ -0.2
TPRKB-208	ENST00000485758	POLD1	P28340	1107 aa		13.79	□□□□□ -0.2
TPRKB-208	ENST00000485758	IRX5	P78411	483 aa	Predicted RBP	13.79	□□□□□ -0.2
TPRKB-208	ENST00000485758	TSPYL4	Q9UJ04	414 aa		13.79	□□□□□ -0.2
TPRKB-208	ENST00000485758	COL15A1	P39059	1388 aa		13.79	□□□□□ -0.2
TPRKB-208	ENST00000485758	PRAMEF22	A3QJZ6	481 aa		13.78	□□□□□ -0.2
TPRKB-208	ENST00000485758	RFC4	P35249	363 aa		13.78	□□□□□ -0.2
TPRKB-208	ENST00000485758	EIF4A1	P60842	406 aa	Known RBP	13.78	□□□□□ -0.2
TPRKB-208	ENST00000485758	ARX	Q96QS3	562 aa		13.78	□□□□□ -0.2
TPRKB-208	ENST00000485758	CANX	P27824	592 aa	Known RBP	13.77	□□□□□ -0.21
TPRKB-208	ENST00000485758	USP16	Q9Y5T5	823 aa		13.77	□□□□□ -0.21
TPRKB-208	ENST00000485758	KIF13B	Q9NQT8	1826 aa		13.76	□□□□□ -0.21
TPRKB-208	ENST00000485758	USP42	Q9H9J4	1324 aa	Known RBP	13.76	□□□□□ -0.21
TPRKB-208	ENST00000485758	CHL1	O00533	1208 aa		13.76	□□□□□ -0.21
TPRKB-208	ENST00000485758	A1BG	P04217	495 aa		13.76	□□□□□ -0.21
TPRKB-208	ENST00000485758	GYS1	P13807	737 aa		13.76	□□□□□ -0.21
TPRKB-208	ENST00000485758	FAM9B	Q8IZU0	186 aa		13.76	□□□□□ -0.21
TPRKB-208	ENST00000485758	CCER2	I3L3R5	266 aa		13.75	□□□□□ -0.21
TPRKB-208	ENST00000485758	GIGYF1	O75420	1035 aa	Predicted RBP	13.75	□□□□□ -0.21
TPRKB-208	ENST00000485758	IL6ST	P40189	918 aa	Predicted RBP	13.75	□□□□□ -0.21
TPRKB-208	ENST00000485758	EIF5	P55010	431 aa	Known RBP	13.75	□□□□□ -0.21
TPRKB-208	ENST00000485758	CALD1	Q05682	793 aa	Known RBP	13.75	□□□□□ -0.21
TPRKB-208	ENST00000485758	CCDC27	Q2M243	656 aa		13.75	□□□□□ -0.21
TPRKB-208	ENST00000485758	DIEXF	Q68CQ4	756 aa	Known RBP	13.75	□□□□□ -0.21
TPRKB-208	ENST00000485758	SRP68	Q9UHB9	627 aa	Known RBP	13.75	□□□□□ -0.21
TPRKB-208	ENST00000485758	AFDN	P55196	1824 aa	Known RBP	13.74	□□□□□ -0.21
TPRKB-208	ENST00000485758	NLGN1	Q8N2Q7	840 aa		13.74	□□□□□ -0.21
TPRKB-208	ENST00000485758	CFAP44	Q96MT7	982 aa		13.74	□□□□□ -0.21
TPRKB-208	ENST00000485758	LAS1L	Q9Y4W2	734 aa	Known RBP	13.74	□□□□□ -0.21
TPRKB-208	ENST00000485758		A0A087WZG4	1122 aa		13.73	□□□□□ -0.21
TPRKB-208	ENST00000485758	ZPR1	O75312	459 aa		13.73	□□□□□ -0.21
TPRKB-208	ENST00000485758	ZNF853	P0CG23	659 aa		13.73	□□□□□ -0.21
TPRKB-208	ENST00000485758	FHDC1	Q9C0D6	1143 aa	Predicted RBP	13.73	□□□□□ -0.21
TPRKB-208	ENST00000485758	IFT57	Q9NWB7	429 aa		13.73	□□□□□ -0.21
TPRKB-208	ENST00000485758	NARF	Q9UHQ1	456 aa		13.73	□□□□□ -0.21
TPRKB-208	ENST00000485758	NRXN2	Q9P2S2	1712 aa		13.73	□□□□□ -0.21
TPRKB-208	ENST00000485758	SENP3-EIF4A1	A0A087X0R7	540 aa		13.72	□□□□□ -0.21
TPRKB-208	ENST00000485758	NBPF26	B4DH59	902 aa		13.72	□□□□□ -0.21
TPRKB-208	ENST00000485758	MMP10	P09238	476 aa		13.72	□□□□□ -0.21
TPRKB-208	ENST00000485758	PIP4K2A	P48426	406 aa	Predicted RBP	13.72	□□□□□ -0.21
TPRKB-208	ENST00000485758	USPL1	Q5W0Q7	1092 aa		13.72	□□□□□ -0.21
TPRKB-208	ENST00000485758	NBPF10	Q6P3W6	841 aa	Known RBP	13.72	□□□□□ -0.21
TPRKB-208	ENST00000485758	WWC1	Q8IX03	1113 aa		13.72	□□□□□ -0.21
TPRKB-208	ENST00000485758	NBPF15	Q8N660	670 aa		13.72	□□□□□ -0.21
TPRKB-208	ENST00000485758	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.72	□□□□□ -0.21
TPRKB-208	ENST00000485758	NUP98	P52948	1817 aa		13.71	□□□□□ -0.21
TPRKB-208	ENST00000485758	KIAA1551	Q9HCM1	1747 aa		13.71	□□□□□ -0.21
TPRKB-208	ENST00000485758	GNAI1	P63096	354 aa		13.71	□□□□□ -0.21
TPRKB-208	ENST00000485758	SYT17	Q9BSW7	474 aa		13.71	□□□□□ -0.21
TPRKB-208	ENST00000485758	MBIP	Q9NS73	344 aa		13.71	□□□□□ -0.21
TPRKB-208	ENST00000485758	ERBB4	Q15303	1308 aa		13.7	□□□□□ -0.22
TPRKB-208	ENST00000485758	PYGB	P11216	843 aa		13.7	□□□□□ -0.22
TPRKB-208	ENST00000485758	KRT24	Q2M2I5	525 aa		13.7	□□□□□ -0.22
TPRKB-208	ENST00000485758	NPM2	Q86SE8	214 aa	Known RBP	13.7	□□□□□ -0.22
TPRKB-208	ENST00000485758	KLHL34	Q8N239	644 aa		13.7	□□□□□ -0.22
TPRKB-208	ENST00000485758	BCL2L12	Q9HB09	334 aa		13.7	□□□□□ -0.22
TPRKB-208	ENST00000485758	IL16	Q14005	1332 aa		13.69	□□□□□ -0.22
TPRKB-208	ENST00000485758	DZIP3	Q86Y13	1208 aa	Known RBP	13.69	□□□□□ -0.22
TPRKB-208	ENST00000485758	NGEF	Q8N5V2	710 aa		13.69	□□□□□ -0.22
TPRKB-208	ENST00000485758	TBC1D2B	Q9UPU7	963 aa		13.69	□□□□□ -0.22
TPRKB-208	ENST00000485758	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	C10orf71	Q711Q0	1435 aa		13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	CAMTA2	O94983	1202 aa		13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	HOXB7	P09629	217 aa		13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	PLCG2	P16885	1265 aa		13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	TM4SF1	P30408	202 aa		13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	DDR1	Q08345	913 aa		13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	SLAIN1	Q8ND83	568 aa		13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	SALL2	Q9Y467	1007 aa	Predicted RBP	13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	CD2AP	Q9Y5K6	639 aa		13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	PARP3	Q9Y6F1	533 aa		13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	ANKRD36C	Q5JPF3	1778 aa		13.68	□□□□□ -0.22
TPRKB-208	ENST00000485758	BRCA1	P38398	1863 aa	Known RBP	13.67	□□□□□ -0.22
TPRKB-208	ENST00000485758	EIF2S2	P20042	333 aa	Known RBP	13.67	□□□□□ -0.22
TPRKB-208	ENST00000485758	POLRMT	O00411	1230 aa	Known RBP	13.66	□□□□□ -0.22
TPRKB-208	ENST00000485758	MYL6B	P14649	208 aa		13.66	□□□□□ -0.22
TPRKB-208	ENST00000485758	NFIX	Q14938	502 aa		13.66	□□□□□ -0.22
TPRKB-208	ENST00000485758	PDIA6	Q15084	440 aa		13.66	□□□□□ -0.22
TPRKB-208	ENST00000485758	DCAF8	Q5TAQ9	597 aa		13.66	□□□□□ -0.22
TPRKB-208	ENST00000485758	WDR63	Q8IWG1	891 aa		13.66	□□□□□ -0.22
TPRKB-208	ENST00000485758	NLGN2	Q8NFZ4	835 aa		13.66	□□□□□ -0.22
TPRKB-208	ENST00000485758	PCDHB8	Q9UN66	801 aa		13.66	□□□□□ -0.22
TPRKB-208	ENST00000485758	DLEC1	Q9Y238	1755 aa		13.66	□□□□□ -0.22
TPRKB-208	ENST00000485758	ANKRD31	Q8N7Z5	1873 aa		13.65	□□□□□ -0.22
TPRKB-208	ENST00000485758	RGL2	O15211	777 aa		13.65	□□□□□ -0.22
TPRKB-208	ENST00000485758	ST18	O60284	1047 aa		13.65	□□□□□ -0.22
TPRKB-208	ENST00000485758	DUSP27	Q5VZP5	1158 aa		13.65	□□□□□ -0.22
TPRKB-208	ENST00000485758	TBC1D9B	Q66K14	1250 aa		13.65	□□□□□ -0.22
TPRKB-208	ENST00000485758	LRP10	Q7Z4F1	713 aa		13.65	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms