RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 BCORQ6W2J9 1755 aa9.01□□□□□ -0.97
BRCA1-216ENST00000484087 HEG1Q9ULI3 1381 aa9.01□□□□□ -0.97
BRCA1-216ENST00000484087 MAPK8IP3Q9UPT6 1336 aa9.01□□□□□ -0.97
BRCA1-216ENST00000484087 CYP19A1P11511 503 aaPredicted RBP9.01□□□□□ -0.97
BRCA1-216ENST00000484087 CANXP27824 592 aaKnown RBP9.01□□□□□ -0.97
BRCA1-216ENST00000484087 POLD1P28340 1107 aa9.01□□□□□ -0.97
BRCA1-216ENST00000484087 RTF1Q92541 710 aaKnown RBP9.01□□□□□ -0.97
BRCA1-216ENST00000484087 PNNQ9H307 717 aaKnown RBP9.01□□□□□ -0.97
BRCA1-216ENST00000484087 COL15A1P39059 1388 aa9□□□□□ -0.97
BRCA1-216ENST00000484087 RPS6KA4O75676 772 aa9□□□□□ -0.97
BRCA1-216ENST00000484087 NFE2L2Q16236 605 aa9□□□□□ -0.97
BRCA1-216ENST00000484087 SLC16A10Q8TF71 515 aa9□□□□□ -0.97
BRCA1-216ENST00000484087 BBXQ8WY36 941 aaPredicted RBP9□□□□□ -0.97
BRCA1-216ENST00000484087 CCDC87Q9NVE4 849 aa9□□□□□ -0.97
BRCA1-216ENST00000484087 KIF13BQ9NQT8 1826 aa8.99□□□□□ -0.97
BRCA1-216ENST00000484087 SOS1Q07889 1333 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-216ENST00000484087 ECM2O94769 699 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-216ENST00000484087 A1BGP04217 495 aa8.99□□□□□ -0.97
BRCA1-216ENST00000484087 MMP10P09238 476 aa8.99□□□□□ -0.97
BRCA1-216ENST00000484087 GYS1P13807 737 aa8.99□□□□□ -0.97
BRCA1-216ENST00000484087 ATN1P54259 1190 aaPredicted RBP8.99□□□□□ -0.97
BRCA1-216ENST00000484087 GOLGA2Q08379 1002 aa8.99□□□□□ -0.97
BRCA1-216ENST00000484087 TRAPPC3LQ5T215 181 aa8.99□□□□□ -0.97
BRCA1-216ENST00000484087 RUNDC1Q96C34 613 aa8.99□□□□□ -0.97
BRCA1-216ENST00000484087 KIF12Q96FN5 646 aa8.99□□□□□ -0.97
BRCA1-216ENST00000484087 USP16Q9Y5T5 823 aa8.99□□□□□ -0.97
BRCA1-216ENST00000484087 USP42Q9H9J4 1324 aaKnown RBP8.98□□□□□ -0.97
BRCA1-216ENST00000484087 APAF1O14727 1248 aa8.98□□□□□ -0.97
BRCA1-216ENST00000484087 RFC4P35249 363 aa8.98□□□□□ -0.97
BRCA1-216ENST00000484087 RIPK4P57078 832 aa8.98□□□□□ -0.97
BRCA1-216ENST00000484087 USPL1Q5W0Q7 1092 aa8.98□□□□□ -0.97
BRCA1-216ENST00000484087 BRCA1P38398 1863 aaKnown RBP8.98□□□□□ -0.97
BRCA1-216ENST00000484087 CACNA1SQ13698 1873 aa8.98□□□□□ -0.97
BRCA1-216ENST00000484087 NEFMP07197 916 aa8.97□□□□□ -0.97
BRCA1-216ENST00000484087 TMPOP42166 694 aaKnown RBP8.97□□□□□ -0.97
BRCA1-216ENST00000484087 DDR1Q08345 913 aa8.97□□□□□ -0.97
BRCA1-216ENST00000484087 RC3H1Q5TC82 1133 aaKnown RBP8.97□□□□□ -0.97
BRCA1-216ENST00000484087 FLAD1Q8NFF5 587 aa8.97□□□□□ -0.97
BRCA1-216ENST00000484087 FMNL2Q96PY5 1086 aa8.97□□□□□ -0.97
BRCA1-216ENST00000484087 BCL2L12Q9HB09 334 aa8.97□□□□□ -0.97
BRCA1-216ENST00000484087 RCAN3Q9UKA8 241 aa8.97□□□□□ -0.97
BRCA1-216ENST00000484087 COL11A2P13942 1736 aaPredicted RBP8.96□□□□□ -0.97
BRCA1-216ENST00000484087 ANKRD31Q8N7Z5 1873 aa8.96□□□□□ -0.97
BRCA1-216ENST00000484087 YBX3P16989 372 aaKnown RBP eCLIP8.96□□□□□ -0.977e-6■■■□□ 18.9
BRCA1-216ENST00000484087 KRT24Q2M2I5 525 aa8.96□□□□□ -0.97
BRCA1-216ENST00000484087 CCDC24Q8N4L8 307 aa8.96□□□□□ -0.97
BRCA1-216ENST00000484087 TBC1D2BQ9UPU7 963 aa8.96□□□□□ -0.97
BRCA1-216ENST00000484087 CARMIL3Q8ND23 1372 aa8.96□□□□□ -0.97
BRCA1-216ENST00000484087 PXDNLA1KZ92 1463 aa8.96□□□□□ -0.98
BRCA1-216ENST00000484087 NRXN2Q9P2S2 1712 aa8.96□□□□□ -0.98
BRCA1-216ENST00000484087 C10orf71Q711Q0 1435 aa8.96□□□□□ -0.98
BRCA1-216ENST00000484087 IRX6P78412 446 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-216ENST00000484087 BICDL1Q6ZP65 573 aa8.96□□□□□ -0.98
BRCA1-216ENST00000484087 BMP2KQ9NSY1 1161 aaPredicted RBP8.96□□□□□ -0.98
BRCA1-216ENST00000484087 PPP4R2Q9NY27 417 aa8.96□□□□□ -0.98
BRCA1-216ENST00000484087 TAOK2Q9UL54 1235 aa8.96□□□□□ -0.98
BRCA1-216ENST00000484087 TRIM35Q9UPQ4 493 aa8.96□□□□□ -0.98
BRCA1-216ENST00000484087 LAS1LQ9Y4W2 734 aaKnown RBP8.96□□□□□ -0.98
BRCA1-216ENST00000484087 CHD4Q14839 1912 aa8.95□□□□□ -0.98
BRCA1-216ENST00000484087 RNF123Q5XPI4 1314 aa8.95□□□□□ -0.98
BRCA1-216ENST00000484087 NBPF26B4DH59 902 aa8.95□□□□□ -0.98
BRCA1-216ENST00000484087 E9PSI1 815 aa8.95□□□□□ -0.98
BRCA1-216ENST00000484087 TAF7Q15545 349 aaPredicted RBP8.95□□□□□ -0.98
BRCA1-216ENST00000484087 NBPF10Q6P3W6 841 aaKnown RBP8.95□□□□□ -0.98
BRCA1-216ENST00000484087 CDAN1Q8IWY9 1227 aa8.95□□□□□ -0.98
BRCA1-216ENST00000484087 NBPF15Q8N660 670 aa8.95□□□□□ -0.98
BRCA1-216ENST00000484087 NECTIN2Q92692 538 aa8.95□□□□□ -0.98
BRCA1-216ENST00000484087 CDCA7LQ96GN5 454 aa8.95□□□□□ -0.98
BRCA1-216ENST00000484087 ZNF521Q96K83 1311 aa8.94□□□□□ -0.98
BRCA1-216ENST00000484087 POTEFA5A3E0 1075 aa8.94□□□□□ -0.98
BRCA1-216ENST00000484087 HTATSF1O43719 755 aaKnown RBP8.94□□□□□ -0.98
BRCA1-216ENST00000484087 ANXA1P04083 346 aa8.94□□□□□ -0.98
BRCA1-216ENST00000484087 EIF5P55010 431 aaKnown RBP8.94□□□□□ -0.98
BRCA1-216ENST00000484087 EIF4A1P60842 406 aaKnown RBP8.94□□□□□ -0.98
BRCA1-216ENST00000484087 GPR162Q16538 588 aa8.94□□□□□ -0.98
BRCA1-216ENST00000484087 PAXIP1Q6ZW49 1069 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-216ENST00000484087 TSPYL4Q9UJ04 414 aa8.94□□□□□ -0.98
BRCA1-216ENST00000484087 NUP98P52948 1817 aa8.94□□□□□ -0.98
BRCA1-216ENST00000484087 A0A0G2JLW4 131 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 POLRMTO00411 1230 aaKnown RBP8.93□□□□□ -0.98
BRCA1-216ENST00000484087 ZPR1O75312 459 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 STARD3NLO95772 234 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 PRKCSHP14314 528 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-216ENST00000484087 RRP1P56182 461 aaKnown RBP8.93□□□□□ -0.98
BRCA1-216ENST00000484087 SLFN5Q08AF3 891 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 NFIXQ14938 502 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 CCDC27Q2M243 656 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 TBC1D9BQ66K14 1250 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 PLCD3Q8N3E9 789 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-216ENST00000484087 ZNF428Q96B54 188 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 NARFQ9UHQ1 456 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 TRPC6Q9Y210 931 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 TNRC6CQ9HCJ0 1690 aaKnown RBP8.93□□□□□ -0.98
BRCA1-216ENST00000484087 DLEC1Q9Y238 1755 aa8.93□□□□□ -0.98
BRCA1-216ENST00000484087 SNRPA1P09661 255 aaKnown RBP8.92□□□□□ -0.98
BRCA1-216ENST00000484087 MYL6BP14649 208 aa8.92□□□□□ -0.98
BRCA1-216ENST00000484087 CHRNA5P30532 468 aa8.92□□□□□ -0.98
BRCA1-216ENST00000484087 TIE1P35590 1138 aa8.92□□□□□ -0.98
BRCA1-216ENST00000484087 PROSER3Q2NL68 480 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms