RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 CD44P16070 742 aaKnown RBP13.02□□□□□ -0.33
SPTLC1-206ENST00000482632 EIF4A1P60842 406 aaKnown RBP13.02□□□□□ -0.33
SPTLC1-206ENST00000482632 CALD1Q05682 793 aaKnown RBP13.02□□□□□ -0.33
SPTLC1-206ENST00000482632 EIF2S2P20042 333 aaKnown RBP13.01□□□□□ -0.33
SPTLC1-206ENST00000482632 DCAF8Q5TAQ9 597 aa13.01□□□□□ -0.33
SPTLC1-206ENST00000482632 NGEFQ8N5V2 710 aa13.01□□□□□ -0.33
SPTLC1-206ENST00000482632 NECTIN2Q92692 538 aa13.01□□□□□ -0.33
SPTLC1-206ENST00000482632 FHDC1Q9C0D6 1143 aaPredicted RBP13.01□□□□□ -0.33
SPTLC1-206ENST00000482632 USP42Q9H9J4 1324 aaKnown RBP13□□□□□ -0.33
SPTLC1-206ENST00000482632 A0A087WZG4 1122 aa13□□□□□ -0.33
SPTLC1-206ENST00000482632 RGL2O15211 777 aa13□□□□□ -0.33
SPTLC1-206ENST00000482632 USPL1Q5W0Q7 1092 aa13□□□□□ -0.33
SPTLC1-206ENST00000482632 SGIP1Q9BQI5 828 aa13□□□□□ -0.33
SPTLC1-206ENST00000482632 GIGYF1O75420 1035 aaPredicted RBP12.99□□□□□ -0.33
SPTLC1-206ENST00000482632 MMP10P09238 476 aa12.99□□□□□ -0.33
SPTLC1-206ENST00000482632 GYS1P13807 737 aa12.99□□□□□ -0.33
SPTLC1-206ENST00000482632 MYL6BP14649 208 aa12.99□□□□□ -0.33
SPTLC1-206ENST00000482632 GNAI1P63096 354 aa12.99□□□□□ -0.33
SPTLC1-206ENST00000482632 KRT24Q2M2I5 525 aa12.99□□□□□ -0.33
SPTLC1-206ENST00000482632 NLGN1Q8N2Q7 840 aa12.99□□□□□ -0.33
SPTLC1-206ENST00000482632 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
SPTLC1-206ENST00000482632 TBC1D2BQ9UPU7 963 aa12.99□□□□□ -0.33
SPTLC1-206ENST00000482632 PARP3Q9Y6F1 533 aa12.99□□□□□ -0.33
SPTLC1-206ENST00000482632 SCN7AQ01118 1682 aa12.99□□□□□ -0.33
SPTLC1-206ENST00000482632 CCER2I3L3R5 266 aa12.98□□□□□ -0.33
SPTLC1-206ENST00000482632 CHL1O00533 1208 aa12.98□□□□□ -0.33
SPTLC1-206ENST00000482632 IL6STP40189 918 aaPredicted RBP12.98□□□□□ -0.33
SPTLC1-206ENST00000482632 BICDL1Q6ZP65 573 aa12.98□□□□□ -0.33
SPTLC1-206ENST00000482632 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
SPTLC1-206ENST00000482632 PELP1Q8IZL8 1130 aaKnown RBP12.98□□□□□ -0.33
SPTLC1-206ENST00000482632 CFAP44Q96MT7 982 aa12.98□□□□□ -0.33
SPTLC1-206ENST00000482632 MBIPQ9NS73 344 aa12.98□□□□□ -0.33
SPTLC1-206ENST00000482632 BCORQ6W2J9 1755 aa12.98□□□□□ -0.33
SPTLC1-206ENST00000482632 EIF5P55010 431 aaKnown RBP12.97□□□□□ -0.33
SPTLC1-206ENST00000482632 DZIP3Q86Y13 1208 aaKnown RBP12.97□□□□□ -0.33
SPTLC1-206ENST00000482632 WWC1Q8IX03 1113 aa12.97□□□□□ -0.33
SPTLC1-206ENST00000482632 IFT57Q9NWB7 429 aa12.97□□□□□ -0.33
SPTLC1-206ENST00000482632 NARFQ9UHQ1 456 aa12.97□□□□□ -0.33
SPTLC1-206ENST00000482632 ELL2O00472 640 aaPredicted RBP12.96□□□□□ -0.33
SPTLC1-206ENST00000482632 NPHP1O15259 732 aa12.96□□□□□ -0.33
SPTLC1-206ENST00000482632 TSR2Q969E8 191 aaKnown RBP12.96□□□□□ -0.33
SPTLC1-206ENST00000482632 SYT17Q9BSW7 474 aa12.96□□□□□ -0.33
SPTLC1-206ENST00000482632 AFDNP55196 1824 aaKnown RBP12.96□□□□□ -0.33
SPTLC1-206ENST00000482632 NBPF26B4DH59 902 aa12.95□□□□□ -0.34
SPTLC1-206ENST00000482632 ANXA1P04083 346 aa12.95□□□□□ -0.34
SPTLC1-206ENST00000482632 DUSP27Q5VZP5 1158 aa12.95□□□□□ -0.34
SPTLC1-206ENST00000482632 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
SPTLC1-206ENST00000482632 KIF6Q6ZMV9 814 aa12.95□□□□□ -0.34
SPTLC1-206ENST00000482632 NBPF15Q8N660 670 aa12.95□□□□□ -0.34
SPTLC1-206ENST00000482632 NUP98P52948 1817 aa12.95□□□□□ -0.34
SPTLC1-206ENST00000482632 N4BP2Q86UW6 1770 aaPredicted RBP12.94□□□□□ -0.34
SPTLC1-206ENST00000482632 CCDC27Q2M243 656 aa12.94□□□□□ -0.34
SPTLC1-206ENST00000482632 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
SPTLC1-206ENST00000482632 NLGN2Q8NFZ4 835 aa12.94□□□□□ -0.34
SPTLC1-206ENST00000482632 WWC3Q9ULE0 1092 aa12.94□□□□□ -0.34
SPTLC1-206ENST00000482632 CAMTA2O94983 1202 aa12.93□□□□□ -0.34
SPTLC1-206ENST00000482632 ZNF853P0CG23 659 aa12.93□□□□□ -0.34
SPTLC1-206ENST00000482632 CLCN6P51797 869 aa12.93□□□□□ -0.34
SPTLC1-206ENST00000482632 AIMP1Q12904 312 aaKnown RBP12.93□□□□□ -0.34
SPTLC1-206ENST00000482632 NFIXQ14938 502 aa12.93□□□□□ -0.34
SPTLC1-206ENST00000482632 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
SPTLC1-206ENST00000482632 GOLGB1Q14789 3259 aaKnown RBP12.93□□□□□ -0.34
SPTLC1-206ENST00000482632 CHD4Q14839 1912 aa12.92□□□□□ -0.34
SPTLC1-206ENST00000482632 FAM177BA6PVY3 158 aa12.92□□□□□ -0.34
SPTLC1-206ENST00000482632 DDR1Q08345 913 aa12.92□□□□□ -0.34
SPTLC1-206ENST00000482632 TBC1D9BQ66K14 1250 aa12.92□□□□□ -0.34
SPTLC1-206ENST00000482632 ZBTB3Q9H5J0 574 aa12.92□□□□□ -0.34
SPTLC1-206ENST00000482632 BCL2L12Q9HB09 334 aa12.92□□□□□ -0.34
SPTLC1-206ENST00000482632 ERBB4Q15303 1308 aa12.91□□□□□ -0.34
SPTLC1-206ENST00000482632 KIF13BQ9NQT8 1826 aa12.91□□□□□ -0.34
SPTLC1-206ENST00000482632 POLRMTO00411 1230 aaKnown RBP12.91□□□□□ -0.34
SPTLC1-206ENST00000482632 GPR162Q16538 588 aa12.91□□□□□ -0.34
SPTLC1-206ENST00000482632 PROSER3Q2NL68 480 aa12.91□□□□□ -0.34
SPTLC1-206ENST00000482632 TTLL7Q6ZT98 887 aa12.91□□□□□ -0.34
SPTLC1-206ENST00000482632 WDR63Q8IWG1 891 aa12.91□□□□□ -0.34
SPTLC1-206ENST00000482632 SETDB2Q96T68 719 aa12.91□□□□□ -0.34
SPTLC1-206ENST00000482632 CHPF2Q9P2E5 772 aa12.91□□□□□ -0.34
SPTLC1-206ENST00000482632 CD2APQ9Y5K6 639 aa12.91□□□□□ -0.34
SPTLC1-206ENST00000482632 IL16Q14005 1332 aa12.9□□□□□ -0.34
SPTLC1-206ENST00000482632 SERPINB2P05120 415 aa12.9□□□□□ -0.34
SPTLC1-206ENST00000482632 HOXB7P09629 217 aa12.9□□□□□ -0.34
SPTLC1-206ENST00000482632 C8orf58Q8NAV2 365 aa12.9□□□□□ -0.34
SPTLC1-206ENST00000482632 MAP3K15Q6ZN16 1313 aa12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 FANCIQ9NVI1 1328 aa12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 TCERG1O14776 1098 aaKnown RBP12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 TM4SF1P30408 202 aa12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 HLFQ16534 295 aa12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 CCDC24Q8N4L8 307 aa12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 TSPYL6Q8N831 410 aa12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 XAGE3Q8WTP9 111 aa12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 DDX21Q9NR30 783 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 NIP7Q9Y221 180 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 CARMIL3Q8ND23 1372 aa12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 ANKRD36CQ5JPF3 1778 aa12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 CACNA1SQ13698 1873 aa12.89□□□□□ -0.35
SPTLC1-206ENST00000482632 C10orf71Q711Q0 1435 aa12.88□□□□□ -0.35
SPTLC1-206ENST00000482632 GPTP24298 496 aa12.88□□□□□ -0.35
SPTLC1-206ENST00000482632 GOLGA2Q08379 1002 aa12.88□□□□□ -0.35
SPTLC1-206ENST00000482632 TWISTNBQ3B726 338 aaPredicted RBP12.88□□□□□ -0.35
SPTLC1-206ENST00000482632 COPS6Q7L5N1 327 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms