RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 GNASQ5JWF2 1037 aa8.24□□□□□ -1.09
SSR1-207ENST00000479485 LYSMD3Q7Z3D4 306 aa8.24□□□□□ -1.09
SSR1-207ENST00000479485 PPARGC1BQ86YN6 1023 aaKnown RBP8.24□□□□□ -1.09
SSR1-207ENST00000479485 PPP1R12BO60237 982 aaPredicted RBP8.23□□□□□ -1.09
SSR1-207ENST00000479485 IGFBP4P22692 258 aa8.23□□□□□ -1.09
SSR1-207ENST00000479485 WEE1P30291 646 aa8.23□□□□□ -1.09
SSR1-207ENST00000479485 PLA2G4AP47712 749 aa8.23□□□□□ -1.09
SSR1-207ENST00000479485 C4orf17Q53FE4 359 aa8.23□□□□□ -1.09
SSR1-207ENST00000479485 CHMP7Q8WUX9 453 aaPredicted RBP8.23□□□□□ -1.09
SSR1-207ENST00000479485 CABP1Q9NZU7 370 aa8.23□□□□□ -1.09
SSR1-207ENST00000479485 CXXC1Q9P0U4 656 aaPredicted RBP8.23□□□□□ -1.09
SSR1-207ENST00000479485 SCO2A0A1W2PP80 73 aa8.22□□□□□ -1.09
SSR1-207ENST00000479485 SPATA31C2B4DYI2 1134 aa8.22□□□□□ -1.09
SSR1-207ENST00000479485 PDIA4P13667 645 aaKnown RBP8.22□□□□□ -1.09
SSR1-207ENST00000479485 RHOQP17081 205 aa8.22□□□□□ -1.09
SSR1-207ENST00000479485 PHKA2P46019 1235 aa8.22□□□□□ -1.09
SSR1-207ENST00000479485 PSMA6P60900 246 aaKnown RBP8.22□□□□□ -1.09
SSR1-207ENST00000479485 FKBP5Q13451 457 aaPredicted RBP8.22□□□□□ -1.09
SSR1-207ENST00000479485 NBPF10Q6P3W6 841 aaKnown RBP8.22□□□□□ -1.09
SSR1-207ENST00000479485 ZNF295-AS1Q8N0V1 137 aa8.22□□□□□ -1.09
SSR1-207ENST00000479485 TRAIPQ9BWF2 469 aa8.22□□□□□ -1.09
SSR1-207ENST00000479485 ATAD2Q6PL18 1390 aa8.22□□□□□ -1.09
SSR1-207ENST00000479485 POU4F2Q12837 409 aa8.21□□□□□ -1.1
SSR1-207ENST00000479485 DOC2BQ14184 412 aa8.21□□□□□ -1.1
SSR1-207ENST00000479485 SH3PXD2AQ5TCZ1 1133 aa8.21□□□□□ -1.1
SSR1-207ENST00000479485 TAS1R3Q7RTX0 852 aa8.21□□□□□ -1.1
SSR1-207ENST00000479485 ALYREFQ86V81 257 aaKnown RBP8.21□□□□□ -1.1
SSR1-207ENST00000479485 CD163Q86VB7 1156 aa8.21□□□□□ -1.1
SSR1-207ENST00000479485 ZDHHC1Q8WTX9 485 aa8.21□□□□□ -1.1
SSR1-207ENST00000479485 ZNF837Q96EG3 531 aaPredicted RBP8.21□□□□□ -1.1
SSR1-207ENST00000479485 MKNK1Q9BUB5 465 aa8.21□□□□□ -1.1
SSR1-207ENST00000479485 NIFKQ9BYG3 293 aaKnown RBP8.21□□□□□ -1.1
SSR1-207ENST00000479485 OIP5O43482 229 aa8.2□□□□□ -1.1
SSR1-207ENST00000479485 FOXO3O43524 673 aa8.2□□□□□ -1.1
SSR1-207ENST00000479485 SSFA2P28290 1259 aa8.2□□□□□ -1.1
SSR1-207ENST00000479485 SUV39H2Q9H5I1 410 aa8.2□□□□□ -1.1
SSR1-207ENST00000479485 LRRC4BQ9NT99 713 aa8.2□□□□□ -1.1
SSR1-207ENST00000479485 CHMP3Q9Y3E7 222 aa8.2□□□□□ -1.1
SSR1-207ENST00000479485 PARP3Q9Y6F1 533 aa8.2□□□□□ -1.1
SSR1-207ENST00000479485 SERTM1A2A2V5 107 aa8.19□□□□□ -1.1
SSR1-207ENST00000479485 TEAD4Q15561 434 aa8.19□□□□□ -1.1
SSR1-207ENST00000479485 B4GALNT3Q6L9W6 998 aa8.19□□□□□ -1.1
SSR1-207ENST00000479485 PHLDB3Q6NSJ2 640 aa8.19□□□□□ -1.1
SSR1-207ENST00000479485 L3MBTL2Q969R5 705 aa8.19□□□□□ -1.1
SSR1-207ENST00000479485 MKL2Q9ULH7 1088 aa8.19□□□□□ -1.1
SSR1-207ENST00000479485 ZNF232Q9UNY5 417 aa8.19□□□□□ -1.1
SSR1-207ENST00000479485 SHISA8B8ZZ34 492 aa8.18□□□□□ -1.1
SSR1-207ENST00000479485 EML1O00423 815 aa8.18□□□□□ -1.1
SSR1-207ENST00000479485 NOS2P35228 1153 aa8.18□□□□□ -1.1
SSR1-207ENST00000479485 SCNN1AP37088 669 aa8.18□□□□□ -1.1
SSR1-207ENST00000479485 CHRNA4P43681 627 aa8.18□□□□□ -1.1
SSR1-207ENST00000479485 GRIN2CQ14957 1233 aa8.18□□□□□ -1.1
SSR1-207ENST00000479485 C2orf49Q9BVC5 232 aaPredicted RBP8.18□□□□□ -1.1
SSR1-207ENST00000479485 STAG2Q8N3U4 1231 aa8.17□□□□□ -1.1
SSR1-207ENST00000479485 VTI1AQ96AJ9 217 aa8.17□□□□□ -1.1
SSR1-207ENST00000479485 TIMMDC1Q9NPL8 285 aa8.17□□□□□ -1.1
SSR1-207ENST00000479485 BRD1O95696 1058 aa8.16□□□□□ -1.1
SSR1-207ENST00000479485 TXLNAP40222 546 aa8.16□□□□□ -1.1
SSR1-207ENST00000479485 NBPF1Q3BBV0 1214 aa8.16□□□□□ -1.1
SSR1-207ENST00000479485 WDR44Q5JSH3 913 aa8.16□□□□□ -1.1
SSR1-207ENST00000479485 POTEAQ6S8J7 498 aa8.16□□□□□ -1.1
SSR1-207ENST00000479485 C1orf216Q8TAB5 229 aa8.16□□□□□ -1.1
SSR1-207ENST00000479485 AIDAQ96BJ3 306 aa8.16□□□□□ -1.1
SSR1-207ENST00000479485 ZFP64Q9NPA5 681 aa8.16□□□□□ -1.1
SSR1-207ENST00000479485 A0A1B0GTH6 734 aa8.15□□□□□ -1.1
SSR1-207ENST00000479485 HIRAP54198 1017 aaPredicted RBP8.15□□□□□ -1.1
SSR1-207ENST00000479485 DBN1Q16643 649 aa8.15□□□□□ -1.1
SSR1-207ENST00000479485 ARTNQ5T4W7 220 aa8.15□□□□□ -1.1
SSR1-207ENST00000479485 C1orf229Q6ZS94 237 aaPredicted RBP8.15□□□□□ -1.1
SSR1-207ENST00000479485 CAPN12Q6ZSI9 719 aa8.15□□□□□ -1.1
SSR1-207ENST00000479485 NGLY1Q96IV0 654 aa8.15□□□□□ -1.1
SSR1-207ENST00000479485 ATP4AP20648 1035 aa8.14□□□□□ -1.11
SSR1-207ENST00000479485 TRIM22Q8IYM9 498 aa8.14□□□□□ -1.11
SSR1-207ENST00000479485 PHACTR1Q9C0D0 580 aa8.14□□□□□ -1.11
SSR1-207ENST00000479485 ZDHHC3Q9NYG2 299 aa8.14□□□□□ -1.11
SSR1-207ENST00000479485 HCN4Q9Y3Q4 1203 aa8.14□□□□□ -1.11
SSR1-207ENST00000479485 PTCD1O75127 700 aaKnown RBP8.13□□□□□ -1.11
SSR1-207ENST00000479485 ALDH16A1Q8IZ83 802 aa8.13□□□□□ -1.11
SSR1-207ENST00000479485 GAS2L1Q99501 681 aaPredicted RBP8.13□□□□□ -1.11
SSR1-207ENST00000479485 QTRT2Q9H974 415 aaKnown RBP8.13□□□□□ -1.11
SSR1-207ENST00000479485 GPAMQ9HCL2 828 aa8.13□□□□□ -1.11
SSR1-207ENST00000479485 SEPT3Q9UH03 358 aa8.13□□□□□ -1.11
SSR1-207ENST00000479485 DYRK1BQ9Y463 629 aa8.13□□□□□ -1.11
SSR1-207ENST00000479485 TATP17735 454 aaPredicted RBP8.12□□□□□ -1.11
SSR1-207ENST00000479485 MSX1P28360 303 aa8.12□□□□□ -1.11
SSR1-207ENST00000479485 LINC00114Q6XXX2 140 aa8.12□□□□□ -1.11
SSR1-207ENST00000479485 AEBP1Q8IUX7 1158 aa8.12□□□□□ -1.11
SSR1-207ENST00000479485 GTPBP3Q969Y2 492 aaKnown RBP8.12□□□□□ -1.11
SSR1-207ENST00000479485 COL26A1Q96A83 441 aa8.12□□□□□ -1.11
SSR1-207ENST00000479485 RRAGCQ9HB90 399 aa8.12□□□□□ -1.11
SSR1-207ENST00000479485 HOXB4P17483 251 aaPredicted RBP8.11□□□□□ -1.11
SSR1-207ENST00000479485 NAA30Q147X3 362 aaPredicted RBP8.11□□□□□ -1.11
SSR1-207ENST00000479485 FOXR1Q6PIV2 292 aa8.11□□□□□ -1.11
SSR1-207ENST00000479485 RHPN1Q8TCX5 695 aa8.11□□□□□ -1.11
SSR1-207ENST00000479485 RUBCNLQ9H714 662 aa8.11□□□□□ -1.11
SSR1-207ENST00000479485 SERPINB4P48594 390 aa8.1□□□□□ -1.11
SSR1-207ENST00000479485 KCNA1Q09470 495 aa8.1□□□□□ -1.11
SSR1-207ENST00000479485 GMCL1Q96IK5 515 aa8.1□□□□□ -1.11
SSR1-207ENST00000479485 OXCT2Q9BYC2 517 aaPredicted RBP8.1□□□□□ -1.11
SSR1-207ENST00000479485 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms